acvr2aa (LOC107709421,LOC107673126,LOC107675352,LOC107601072)


Basic Information

Item Value
gene id acvr2aa
gene name LOC107709421,LOC107673126,LOC107675352,LOC107601072
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12392286 ~ 12429356 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248569.1
accaaaacaatccaCCCCGGCGTCCATCTTGAATACAGTAAGCCAACGGTGACTGACAGCAACGGAGAGGGTATTCGCGATAAACTGAGTTCCGACCGCTCGGAAAAGTCAACCGACCGCGAACGCCGGGACAATACGTATCGAAGGATTAGGTTTAGCGACGTTATTTGTCAATTCGTTATTTCGTTTCATTTTGGCGTCATATTCCTGACGGGGCTGATGAAGTTATTTCGGAGGCTGTACGTGCTAAGCTTTATTCAGCCGTCGACATGTCTTAGTTTAAGACGTCTGTTTGTTTTAACTACCTACCTTAGCAGTTCTGGAGAAGAGTTGTGAGCTCGGCAGTTGCAGGTTTGAGTCGCTAACATCAGTAGGGAATGTGCATATAGCGCGTTTGGCCATATTTAAGTCCTTCACTGTCAACTTGAGCTCGCGCGTGCGCTGAATCGTGCGCGTGACcccatttatttcactttatctACGATCTGTTGTACTACACATATTGTATGTAGGCGCAAAGCGAAGTGAGCGTGATGTGGAAACATCGCTTAGGGATGTTAATTCCATTTTCATCCCCGTAAATGTGCATGCGTTAAGCGTACTGCCATAGACATTTCGGGAGGTTTGGGAGCATTGCTCTGCTTGAAATGTTCGTTCCTTTGCATTAATAGCTAATAtttaactgtatattttatggCGGGTTCTATGCATGCTGTTCAGTTGTTCTGGTCACCGGGGTTGGGAGCTGGCCCATTTGCTGAACGAGTTTATTGAACGGAGGTTCGTTTATTCTGAGCGCGCGGCAGGGCAACATTGCATAGATATAGTATTCGTACGCGTTGGAATTTCCTCGTTTTTGATATGGGTTTTAAAGCAAACTGCACGGACAGTCacatattactttatttttaaaagctcgTCTGCTTCGAATGAACTATATCACCAGTGGACACTTTAATGTCGTTTCTAAACCGACGAATCAGAGGACTATAAGCTGGCATTGGATTTGTGCACTGCCATATATCACTGACTCGGTGACATGGATGTGTTTCACTGACTGCCGATCAGTGGTTCGGGGAGGAACTTGAATGCAAAGACTTTTGGATTTTGTAGGACAAGACAGTAGATTGAAAAAATGGGACCTGCAACAAAGCTGGCTTTTGGAGTGTTCCTCATTTCCTGCTCCTCAGGTGCCATTCTCGGCCGATCAGAGACACAAGAGTGTGTGTTCTACAACTACAACCCCAGCTCAGAGAACCGAGGAAATCGCAGCGGTATCGAGTCTTGCGTGGGTGAGAAGGACAAGAGGCTTCATTGCTTTGCAACTTGGCGAAATGTGTCAGGATCGGTTGAAATAGTAAAGCAAGGCTGCTGGCTTGATGATGTCAACTGCTATGACAGCACTGAGTGTGTTGAGAAGAAGGAGGACCCGGATGTGTTCTTCTGCTGCTGCGAGGGCAACATGTGCAACGAGAAATTCTTCTATAACCCTGACATGCCGCCAGTTAAGAGTAAGGCTACCCTCAGCGACACAAACAGCAAAGTCTTTAAGGCAACATCTAACCCCTTCACCCAGAAGCCACCACTCTTCAGTACCCTTCTATACTCCATCGTGCCCATCATGGGCATCACGGCCATTGTCCTGCTCTCCTTCTGGATGTATCGACATCACAAGCTGGCGTATCCACCTGTTCTGGTGCCTACCCAGCACGCCTTTCATATAATGATAGAGGACCCTGGACCAATGCCGCCGTCTCCCACCCTGGTCCAAAAGCCTCTGCAGTTGTTGGAAATCAAAGCTAGGGGCCGCTTTGGTTGTGTGTGGAAGGCTCAGCTGCTCAATGACTATGTGGCGGTGAAGATTTTCCCCATTCAGgACAAGCTGTCATGGCAGAATGAGTATGACATTTACAATCTCCCCGGCATGAGACATGAAAATGTTCTGCAGTTCATCGGGGCAGAGAAAAGAGGAAGCAACCTGGACATTGAGCTGTGGCTCATCACGGCTTACCATGAGAAGGGCTCCCTGACGGACTACCTAAAGGCAAACGTAGTGACGTGGAATGAGCTGTGTCACATCGCTCAAACCATGGCTCGTGGCCTGGCTTACCTACACTCTGACTTCCCCGGACACAGAGACGGCCACAAACCAGCCATCGCACACAGAGATATTAAGAGCAAGAATGTGCTGCTGAAGTCTAACCTGACGGCATGTATAGCTGACTTTGGTCTGGCTTTGAGGTTTGAGGCAGGAAAGTCAGCTGGGGACACACATGGGCAAGTGGGAACCAGACGTTACATGGCCCCGGAGGTGTTGGAAGGGGCCATCAACTTCCAGCGAGATGCTTTCCTCAGGATAGACATGTATGCGGTAGGACTGGTGCTTTGGGAGCTGGCGGCCCGTTGCACTGCGTCTGATGGTCCAGTGGACGAGTACATGCTTCCGTTTGAGGAGGAGGTGGGCCAGCACCCCACACTAGAGGACATGCAGGAGGTGGTGGTCCACAAAAAACTTCGGCCCACTCTCAGGGAGTGCTGGCAGAAACATCTGGGTCTGGCCATGCTGTGCGAGACTATAGAAGAGTGTTGGGACCACGAGGCCGAGGCGCGTCTCTCCGCGGGATGCGTCGAGGAACGTGTGATCCAAATGCAGCGGCAGACCAGCGTCTCCGCCCCAGAGGAAATAGTCACCGTTGTAACAATGGTGACCAACGTGGACTATCCCCCCAAGGAGTCCAGCCTATGACTAGAGGATATCAGCATGTGAATTGCGGGCTGACCGAACAGAAAAGACTCGTCGGGGATGGTGGTGGACCGCTGTTCTGACGGCTGGCTTCAGACATGCTGGATAATCTTCCTGTACTTAACGGCTGGAGCAAATGCAGACAATGCATTTTGTGCCGAATCTGGGTTTAATACAGGTTTACCCAGAGCCAGCGACGTTATTGtatgtgttgtgtatatataaactagTACCACGGGGCACTCTGGTGAGGACGGATGGATTATAAGCCGACGTCGAAAACCAACCTCTTTGTTGTCGAGAATAAACTTTCCCATTCGAGGGGGAAACGAGACTCCTCCTCCGCACGGCGCTCGTGTCATTTCAGTATAAAAAAGGGCAACgtccatgtaaaaaaaaaacaaaaaaacaaaaaagacacatttaatgTGTTCGTATGAATGACTATTGTAATGCCAATAAGAAACAGCTTTTTGAATGTGTAGTGTGACGCTGCTGTACAGATATCAACAGAAAGGGTGACGATACGACCCAAATCAACACGTGTTTCCTCTGAAAGCTTTCAGAGTTTCTGTCAGATAACCACCAACCTCTCGACAAGGTATACCTCAGTTTCTCATCCTAATAATAAGTTTGTTTTGTAACactatatgatataaaaaaagaggCTTTTCGATGACCTCCATTTGGCACGGAAGCTTTTTAAATACggggaaaactttttttatatgacAGATTATGCCAAGAAACGATGGCCATTCATAAACCAGTGTtctgccttctttcttttagtTGTTCTCTGTGTTGCCCTGCTGTTTAAAATGTGatacttttgttgttttttttagcattgtgaaccgtttgtttgttaaaacaaattttGACCTTTATCGAGACCtgttgagaagaaaaaaatccctGACAATATGAATTTTGTGAACATAATACAGAAGCACTTACCAATATAGGTTTGCGGTGTCCTCACAACATTGACGTATGTGCAtgccttgttttcttttctttttttttttttttttggttcattttttcattttcttagcTTTTCAAACCTTTATCACACGAAGCTTGTACATGAGATCCCGTTAGCAGTCATGGAAACCCCTTTATTATTGGTTGATCTGAAGTATTTCCTGTTTTCAGGGCGTCACTCTTTGTTTAAGTTCCATTTGGAATCATTGAATCTTGGTCTTCTACGGTCTCCTCGCTGTCCGCTTCTGTCGCGCTGCGAGTAGAAGACCACCCTTGTGCGCTGCGTTTGAACCAGCCTCCTCATGAAGCCCGACCTCACGAGTGACGCGTCGAACTGGTTTCAGATCAGCAGCCAGGTGACCTTCTACACACTTCTACAAGAACTGTATCTCAGTATGTCTCAGGAAGCGTTTCCCTTTGCTTTGAGCCCTCTGGTGCCATTCTGGTGACCCTTGTTGTATTATGTATGCAAGGGCCCTTAATATAACACCTTATTAGTGTGGTCATATTATGTGCAATAACATCCTAAGCAGGTACTGTTTCACAGCTCACAGGCCACTTCCAGTGTGGTAAAAATCCAAGCGCCTAGCAGTTTGCTTAGACCATAATGTACATCACAAAGTGAAGTCGACGTCAGGCTATGCATATGTTATGATGCCCGGTTGTCTGAGAGTATTAAGCtaataaaatgctgtaatgGGGACCGAACACATGCAGTAACTCTTTGCCAAGAGGCTGACAGAgtcttttaaaagaacagcttctCTGCTGCTGCTCTTTTGGCTTCATTCACACTGCACTTGAATCCAATTTGATTTTCAAACCCGATCTTTAAAATCATTTCGCCAGAAATCAGCTTTTTGGACAGTGTAGTCAATAGCCATTCCAGATAACAAAAAACTGCTTGAGATCTGATCAGACCGTTCACACTGAAAATAccacatatttatttgatttaaatctgGTTTGTAAAaaatctgatcttttttttttttttttttaaatccctttCTGACTATAAACTGATTTTGTATCAGAGGCTAAATTGGATTTCTGCTGCCTGTCTGAACAAGTCCTGAAATACGATTCTCTGTAgttaatttagcttttaataTTGCATCCCAAAAAGggtggaaaaaaatgaatcaattcAGGCACATTTTTGAACACATTTCTGAAAATCAGAGTTTAATCTGATTTAAAACgacatattattgttatttttgtcaggtttgtaaaaatgtttttctgttcagACTACAAACAGCTAAACTGATTTGAATCTAACAatgaatcaaaattaaaaaaaaaaaaaaaaaaaaaaaagatttcaatcTGATTTCCATCCAtctttgtctgtgttttgtaaTCATAGCATTTGATGTTTTGATCCATTTAGACTACAGTTCTAAACTGATTTAAGTCTGATACAAAATCTGATTTCTGTTGCCTGTCTGAACAGATGGTAAAATATGATTCAGTGGCTCACTTtggttcattttgttttcacagttcTTTTACAATGTGATGCATTTGACAATGTTCAGGTCCATACAATCGTATGCAATCAAGCCCTTTCAATGAAagctctctatctctctctactGTAGCATTCTCAGCCAGCTCGTTCTGTTTGACTTCATCTGATGGTAAACTAATACAGGGGCCTGTGCAATCTTTTTAAGGCCCTTAGTTGGACTCTGTAGATGCACAAGTCATTGCATTGAAGGTCAATTGGTTATAACATCAAGCTGAAGTACCTGGTTCATTTGCAGGATGAGCGCTTTGGTCTGAGAGCATCTCCTTGAGGTTCTTGTGATTCACTTTTGACTAAACACTACAGATGATTCAATAAGCTGAGTGACTGCTGCTGGCCTGTAAAGTGTTTTCACCAGGTGCTGTCCTGTTCCCTGTCTGTTTTTGGTTTTCTATTTGGGGAATCTGGGGGTGGGAGGGTGGAAAGCCAAACTTTAAAAGCCCCATGTTTAGTAGAAGACTTGGATGATAATGCACCGTATGTACATATGAATGTTGTTTTAGATTGTGAAAagagcatgcatttttaatgtctcaaagaaaaaaatcctttattgatattattattattattattattattattattattaaatattttaatgttaattttgtacatctgtattttagttttaataatttatatcatGGCCCAACTGTCATTCTTCTTTTCTGGATTAATGAGAAgtgatgctatttttaaaactgGTCAGATAAAACACTACTAAAGAATCAATCCTTTACCTCAGACTTCCACTCACAGAGTTCAAAAGATTGAACAAACAGTGTAGCACGACAGACAACATGGTGCAGCGTCGCAAGTATTGCTCCTGGGATTCGACCAGcagcttctctctctgtcttttttttctcagacacGCTTTTTCGGTCTTCGTGACCATGTCTCTTCTCAACTACACCATTGAGTGAATGTCTTCACTTTACCAAAACTCTCCATTTTAGGTGCGAGCAGCTGTATTACTGTTGTGCTGGACATGCCATTTTTGTCCACCTTTCTCTCGAGTATTTAACGCATTCAGGGCCTGATCAGACGTAATTGTTACATAATGTACAGATGAAATTTTATGCTACTCTTCCCCTCAAATAAAGTATAGTGACTGCTCTCAAA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway biological_process
GO:0001755 neural crest cell migration biological_process
GO:0051216 cartilage development biological_process
GO:0006468 protein phosphorylation biological_process
GO:0030902 hindbrain development biological_process
GO:0016020 membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity molecular_function
GO:0005024 transforming growth factor beta-activated receptor activity molecular_function

KEGG:

id description
K04670 ACVR2A; activin receptor type-2A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248569.1 True 6398 mRNA 0.43 13 12392286 12429356

Neighbor

gene id symbol gene type direction distance location
LOC122351360 arhgap15,LOC107673132,LOC107709415,LOC107555858,LOC107563181,LOC107711394,LOC107675340 coding upstream 236313 12122231 ~ 12155973 (+)
arhgap15 arhgap15,LOC107673132,LOC107709415,LOC107555858,LOC107563181,LOC107711394,LOC107675340 coding upstream 305778 12046474 ~ 12086508 (+)
nepro si:dkey-22a1.3,LOC107733637 coding upstream 1006292 11382392 ~ 11385994 (+)
tex30 tex30,LOC107663828,LOC107567637 coding upstream 1010334 11379870 ~ 11381952 (+)
poglut2 kdelc1,LOC107567637,LOC107733631,LOC107675345 coding upstream 1012864 11372926 ~ 11379422 (+)
med4 med4,LOC107724027,LOC107673119,LOC107601074,LOC107709409,LOC107675337 coding downstream 23770 12453126 ~ 12456128 (+)
htr2aa htr2a,htr2aa,LOC107673120,LOC107709424,LOC107601068,LOC107724025,LOC107675342 coding downstream 52818 12482174 ~ 12507487 (+)
esd esd,LOC107675365,LOC107601075,LOC107709410,LOC107724032 coding downstream 84940 12514296 ~ 12518069 (+)
rubcnl rubcnl,LOC107709411,LOC107673128 coding downstream 125257 12554613 ~ 12560394 (+)
dnah7 dnah7 coding downstream 133103 12562459 ~ 12619422 (+)
G69578 NA non-coding upstream 69754 12322251 ~ 12322532 (+)
G69539 NA non-coding upstream 191689 12199934 ~ 12200597 (+)
G69518 NA non-coding upstream 382364 11979781 ~ 12009922 (+)
G69483 NA non-coding upstream 968969 11420205 ~ 11423317 (+)
G69459 NA non-coding upstream 1146808 11245151 ~ 11245478 (+)
G69625 NA non-coding downstream 27908 12457264 ~ 12457498 (+)
G69659 LOC107709425,LOC107724026 non-coding downstream 88933 12518289 ~ 12526873 (+)
G69706 NA non-coding downstream 235656 12665012 ~ 12724840 (+)
G69718 NA non-coding downstream 343978 12773334 ~ 12773850 (+)
G69723 NA non-coding downstream 408363 12837719 ~ 12840151 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other upstream 236482 12046499 ~ 12155804 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other upstream 902137 11465604 ~ 11490149 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other upstream 1361877 11021736 ~ 11030409 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other upstream 1997056 10328731 ~ 10395230 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other upstream 2217503 10167336 ~ 10174783 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other downstream 5632 12434988 ~ 12452365 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other downstream 198179 12627535 ~ 12629535 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other downstream 302942 12732298 ~ 12803408 (+)
G69755 NA other downstream 555512 12984868 ~ 12985978 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other downstream 860337 13289693 ~ 13304591 (+)

Expression


Co-expression Network