fhip1b (fam160a2,LOC107690600,LOC107731760,LOC107690485,LOC107569793,LOC107719813)


Basic Information

Item Value
gene id fhip1b
gene name fam160a2,LOC107690600,LOC107731760,LOC107690485,LOC107569793,LOC107719813
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 16006180 ~ 16024933 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248589.1
CACAGCGTCCCGTGCGCGTGGGTGTGTCCGTGCAATCTGAGGAGAAAGATGGCTGCGGGACGAAGGGAGAGGTTTACGAATCTGAGATTCGCCGTTTCAGGATAGACAGGTCGCGGCGGAGAGCGAAGCGGAAAACAGCACTCGCTTGCgtgtgtgtggagGAGTCTATGTATCGGTATGGAGTATTGTGCCGACAGCAAACTGGATGACAGGGAGTGCAGACAAGCCTCGCATGCTCACACACTAATCACTGGTGTACAGTGACTGTTGCTGCAGACTTCAACAGGATTCCATCCTTtctatgattttatttctttaagctGGACTCTTTATTTCTTGATTTTTGGACGCCTTTTGTGAGCCGCCTTACCCCCTTCCCCTTTTcccttttctctccctctccacACTTTTCTTCCCTCTCTCCCTTTATTCTTTCCCTGTTGACGTTTTGATCAAATTTGGATCAGCTTATGTGCTAAAATGAGCTGGCTGAGTCGTTTAACTCCAAGAGGTCCAGGCACTCGGACCGGTCGACATGCAGCTCCATCCAGCCCATGCACTGCCGACCCTGAGACTTGTCTTATGgtgtttgaaaaccactggagACAGGTGTCAGGGGTGTTGAAACACAGAGAGTCTTCAGTGGGTGGTTATGCCGACGATCTCACTGCAGTTCGCAATCACACAGATCAGATGCTGTGCCTGTTAGCTGAAGAGAGACCAGCAGGGGGAGACATTGAATCACCAGCAAAGGGTCCTATTCTGGAGATGGTGGTGGCAGAGAACATCCTTGATGAGTTGGTACAATGGCATTTGCGCCGTGGTCTGGATCCAGACAGCCAGTTGGAGCTGTTGAAATTGTTTGAGATGCTGATCGGACAGTCACATCAGCCCCTGCTCCTGCACAGTGCAGTGCTACAACCGCTCCTAAGCCTGCTGGGAGCATGTGTGGATCCCCAGCTGGGTTGCCCTGCTGCTCTAGAGTCCAGCCTCGTACTGCTGCTAAATCAGgtatgtgtgtgcatgGCGAAGGAAACTGCAGTTTTGGAGTTGATATTTAGGTGTGGACCTGTACAGCAGGGTCCCACTAACCTGCTGATCTTCTCCCTGTTGGTGCCGTTTATACATCGAGATGGCTCTCTGGGGCAGCAGGCCCGTGACGCGCTGCTGCTCGTCATGGCAACCTCTGCCAGCAACCACGCTGTTGCACGTCACATCGCAGAGAACTCCTACTTCTGCCCAGTGCTAGCGACAGGGCTGAGTGGACTGTATTCATCCCTGCCACGAAAGATTGAGGTACGGGGCGACGACTGGCATGCCCTGCGGAGGGAGGACTGGATGGGCGTCTCCTCTTTAGTGCTGTTCATGAACAGTCTTGAATTCTGTAACGCTGTAGTGCAGGTGGCACACCCTCTTGTGCGCTGCCAACTCCTTGACTACCTCCACAACGGCTTCCTGGTTCCAGTCATGGGCCCCGCTCTGCACAAGTCGTCAGTGGATGAGATGATAGCAAGCACGGCATATCTGGACTTGTTTTTACGCAGTATCACAGAAACTTCCCTCCTTAAGACCTTTCTGCGCTTCATTTTATTGCATCGCCATGACAACGACACCATCCTTGATACACTACTCACACGCATCAGCAGCAATTCACGGCTGTGCATGGTCTCTCTGAGTCTGTTCAAGACGTTGCTCAGTCTCAACTGTGAAGACCTCATGCTCCAGCTTGTTCTCAGGTATCTGTTGCCATGCACACATGTAATGCTAAGTCAGCGAAGGGCAGTCAGAGAAACGGACCTCTATGGCAAATCAGCTGACAAGTTCCTTTCCCTCATACCAGAATGCTGCCAAATCACTGCAGCACCCTCTGGTGAGCGGGATGATGAACCAGCCTTTTGGGGAAAAGTGTTAGGTAGTCCCACCTCAGAGTCACCGGTGCACCCCAGACCTAGCACTCCTTCCCGTCTCGCTCTCTTTATTCGACAGCAAAGCTCAGGAGGTCAAGCCAACCCCCCCTCGTCTGGCTCGGAGAACGCTCCCTCTTCTCCTCGTGGTAGCAtttcctcccctctctctcctgaCAGCCCCATGCATCAACTCCAAGACGCTTCAGAAGGAGAGACTGGCTACCTGGAATACCTGCGCGATGCTCGGAAGGGTATTGAGCTCTGCTCCTGGGCCTGTCGAGACTGGTCAGCTCCTTACGATGGAGAAAATCCCTCTCCAAACTCTGCTTCTCCTCCACCTCCCCCTCCTACGTCTAACCCCTCCCTCAGTATGGTACAAGAGCATTTCTCCGTAATGGATCCTGCTCAGCAGAGGGCAGCAGTGGTGGCTGCAGCACGTGCCGAGTGGAGCAGTTCAGATCGAGATAGTGGAGAGTGGGATGTTACCATCAGCAAGAACTGTATCAGTCTCACACCCCGCAGTAAGAAACGGAGCCTTCTTCCTAGTTCTATACCTCTTCAGTCTTCTTCTACATCTATCTCTACAGAAATAACAGGTTCTGTGGAAACCGTATCCCAACACTCTCATTCAACATCTCATCCCGCACTCTATAATGGAACGGGGCAGGTGGAGCTCACAGACAGTGTGGACGATAGAATGGAAGTTAAGAAGGTGAAAAGGGACTCTGATGTAAATAACAGCATAGTGGAGACAGGGATGAATGGGTCGATGGGTATAGGCCCGGTTGACTACAATGATTTCCATGTAGGATCGGCAATGAAATCATCTCAGGTGCAGGTGAAGCCACATCTGCAACATCAAACCTCTGTGCCCTCTTCTGCCCAAGAGTGTCTACAAGGCGAAAGCCAGAGATTGTCTCCTGTTCCTACCTTGACTGATACTTCCACAGTTCCCCGTGAAAGCAGGGGTCCGGAGTCTGTTGAGCGTCTGATTGAGGAGTTGCTGGAGCGGGCGCCTTCGGAGCCATTGTCTGGAGACTCGAAATGCCAGGGAATAAGCATTGAGGCTTTTCACCAGGAGCTGAGGGAGCTGGAGGAACGTGTAAGGGAGAGGAGGGTTCTTTCACGCAGCTCGGAGGAGTCCTCTCGGGAATTTCGCACTGCTCCTGCTTCTAGCCTGACAGATGAGGAATGTCTTCCAGTGGAGACTGAGCAGCGCTCCGGTGAAACGAAGCCTGACAGCTCTGCCCCTGCGGTGTTTAGCCCTGCACGACCCCTCGGACAGCCTCTTGCTCAACCGTACACAGGTCCATTTATAACAGTCCTGTTCAGTAAACTGGAGAGTATGATGCAGAACTCCCTATATGTGAACATTTTGCTGACGGGTGTTGTGTTCCAGCTGGCCTGTTACCCTCAGCCTCTCCTCCGCTCTTTCCTCCTCAACGCCAACATGGTGTTTCAGCCCAGTGTTAAATCACTCATTCAGGTGCTAGGATCAGTAAAAAATCGCATTGAAGCATTTGCAGCAGCACACGAGGATTTCCCTGCCATGTTAAGAAAGGCTCGCCGCTTTCTGATTGCAAGAGGAAAGTTAGACTGGTCCGACTCACCCATGGGAGTGCCCAACCTCCGTCGATCAGACTCATTAATTAAAAGCCGAAAACCATCTCTGGGCGATCTTATCCTGAGGCACACCAACAGTCCTACAAGAGCTCGACATGCAGCTCAGTTGGCCTTGGCACACGTGAGAGATGGAGGGCAGTCTCTGCACAGTGCTTTGTTTCGGGGTGGTGGAGCCAGTGGGGCCTCTGGCCTGGAGAAGCAGGCAGAGGCTCTAAGGGTGAAAAACGCAGTCTACTGTGCTGTTATTTTCTCCGAGTTTCTCAAAGAGCTAGCAGCTCTTGCACAGGAGCATGCCATAGCCCTGCCCTTCCCACCTAGTCAAGGCATTGAGGAATAACACCAGGCCAAAAGTTTCCTCTATATTTGCTTTATCCACTGTTCCTGGCACTGAGCTGTAGACTATGTATCCttgagatctttttttttttaagggacaTAATGCACtcaaaaagacaggaaaaatCAGTTGATCATAAAGATGAAGAGAGAGGACATCTCTTGTTAATAATCTCATGttcataatgtaattttttttaattgtacaggACCATTTATCCATTAAGCTTTAGGAAATTGTGCATATAAATCTTGTATATAgtctatataaaatatctatgtGTATAATGATTTTTGTACACTCAGAGAGACTTGCATCCTTTAAGCTGGAGGAATTTGGCCGGAAACTTGCACTCCCTACGTTTTTAAGTCACTTCAGAGACTAGCTAAAGTAGATTCACTACACAcggttcttttaaacttttatgggtgcAGAAgtgccatttacatttttagcaatgTCGAAtggttattttctgttttatagaaatataggTCTGTTAGATCGCACTAGGATAAATCAGAAATAATCATCTGGCCTTTTTTAAAGGACGAGATGTCAGATACTGTTTACTTATCAAAAGCTGGGCAATAAGTCCTCGGTATCGCAAAAGGATTTGCCTCTTTATTGACACATCTCTGAAAAACGAACGAGTGACAGAATGCTCAAGTTCTGCCAAACTCTAGCACAAATCTTCTTGTCCAACAGCTAGAGTGACGTTAGAACCCATAAAGAGGGGAGAGGGTTCATTTTCCTAGCCTCCGTCCCAATAAAAGCCTGACAAATTAAGCATAGATGGAAAGTTTCATTTTCCTTCTTGTGTCATGTCGCAGCAGCACAGTTTTAGGATGAGTTTCTGTTCATTTTAGGGAAATGCAAATGGTACATTCACCTAGCATGGCATTACATATCCTCTTAAGTGTTTTTGGGAAAGGCACTTATTTTTCTGCCCACAAAGATTTCCTGTATTGGATGTTAGCGTCCCTTTTGGCGTCTGACTAGGTGCTAATGTCTTAAATATTTGACTGGTATGAACAAAGAGAAGCTTGCTTAATAATTACTTGTCCCTTTAAGGAGTGAGCCAAGTTATGTGAATCATAAGCCATCTTAGTGTTGaatcaaagtgttttttttttttttctgttcattacTTGATTTTGCTAGTGTTATGGCGCATGAGTGAATTCAGCCATGATGTGTGCATAGCGGAAACgccactttttaatttttttttattgccaaaatACTTCAGACACTTTAATTTTCAGAATGGAAGTTAGGATATGCATGCGCATAAGATTTgtgattgtttttaaaagtgagtgtgcgtgtctttttttcagtatcttttttttttttgccccttGTGTCTTAAAAACTCTGAAATCATCCATCCAAGAGCTTTTATCATGCACAAGCCAGATGCGCATTACCTCAGTTTACTTAATTTTCTTTCCATGCAGTGTTCTTTCTGCTTCACTTGTGTTAATTCAGTAATTCTGTTCAATCAAATATGCTTTTTGATCAGTTTATAGTTGTAAGAGTAGACCATTCGAAAAGCAGTTAAATTGTCAATCCATCCATTTTCCCCTCCTTATCTATCCACCCATTCATAGAGGGTCTGTGTAGCACATTAGTGTGATGCTTCTCTGCTTTTGTTAGTTGAATATGAAATGTTTGGCATGTAAATTCCATATTTGAGGATAACGGTAGACCATGTTAGTGTCAAAAATAGTTTGTGCTTTATCTGAAACATGCTTTGATGTCTGTGTGGGTGAGAAAGGATAGAAAGGATAAAGAGCGAGAGGTTGAATACAGAAGCGGTACATATATGTTAGGGTTCAGTTATCTCTATGGAGACAGAGGTTATTATACTTCCGTTCAGTTTCTAAGTTAGAAATCAAATAGGCCTATACAACTGATGTGTCGTAAGATACCAATGCACAAGAAATGTCCATCGTTTTTATGATGCAATTATATGCCTGATGTGGAGCAgatagcatgttttttttttccctttttatacATACTTAAGTGTTTGGTATGATTttggaaattgaaaaaaaaaaaaaaaaaaaaaaatcaggagcTCATTGATTGTGTATGCTTGTTAttgaaaagtgtttgtttgatcAATATGCATTGCACAGTTTTTAAGTTGATTTTTCAGTATTTGATTTTTctcttggttttttttctccacactgtccagttgtttaaatgaaatgttgacGTTGACAAGGACTTCTGCGGCTTGTTATCTATGCAAACTGGTTTCTGTGCGTTtctgaattaaatgaatatggTTAAACCTTTGGGGACAAACACAAACTAACTTTACAATCGGGAACCCCGCTCTTCAATAATTGACTCATCCCTTATCAATTCAATAATCTACTGGACTGTATGGGAACTCATGCAAAGTGATGAAtgttatcaaaatatttttctatatataaaacgGAGGAGGAAAGTGGAACCGAATGGAGATTTAAATCAATGATAAAACCTTCAAAGACAAACACTAAAAgggaatgtttttattaatttataaatgtgttacCTGGCAATA

Function

symbol description
fam160a2 Predicted to be involved in several processes, including early endosome to late endosome transport; endosome to lysosome transport; and protein localization to perinuclear region of cytoplasm. Predicted to act upstream of or within protein transport. Predicted to be part of FHF complex. Orthologous to human FHIP1B (FHF complex subunit HOOK interacting protein 1B).

NR:

description
PREDICTED: FTS and Hook-interacting protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248589.1 True 6439 mRNA 0.45 13 16006180 16024933

Neighbor

gene id symbol gene type direction distance location
LOC122351503 LOC107731735,LOC107690619,LOC107690492,LOC107595881,LOC107570033,LOC107719821 coding downstream 136 15998141 ~ 16006044 (-)
hpxa LOC107690487,LOC107719811,LOC107595840 coding downstream 27879 15974565 ~ 15978301 (-)
LOC122351640 LOC107719827 coding downstream 32619 15966763 ~ 15973561 (-)
gatd3 zgc:112056,LOC107731744,LOC107570103,LOC107595889,LOC107659887,LOC107690602,LOC103039907,LOC105908687,LOC108412974,LOC106582488 coding downstream 39713 15963794 ~ 15966467 (-)
olig2 olig2,LOC107659900,LOC107719825,LOC107595891,LOC107731746,LOC107569749,LOC107690629 coding downstream 63090 15940890 ~ 15943090 (-)
casq2 casq2,LOC107569839,LOC107690483,LOC107595834,LOC107756748,LOC108432573 coding upstream 67797 16092730 ~ 16097066 (-)
slc5a3b slc5a3,LOC107748166,LOC107673698,LOC107569828,LOC107690482,LOC107595832,LOC107756792,LOC568338 coding upstream 81826 16106759 ~ 16116264 (-)
rpl8 rpl8,LOC107595836,LOC107748161,LOC107673716,LOC102782025 coding upstream 156821 16181754 ~ 16183111 (-)
LOC122351999 caska,cask,LOC107565944 coding upstream 179040 16203973 ~ 16300457 (-)
LOC122352003 caska,LOC107673660,LOC107565944 coding upstream 308252 16333185 ~ 16418774 (-)
LOC122352066 NA non-coding downstream 52204 15948113 ~ 15953976 (-)
G70660 NA non-coding downstream 243511 15762383 ~ 15762669 (-)
G70633 pikfyve,LOC107719798,LOC107681306,LOC107731754 non-coding downstream 361904 15642259 ~ 15644276 (-)
LOC122351574 NA non-coding downstream 367744 15628883 ~ 15638436 (-)
G70581 NA non-coding downstream 584603 15418999 ~ 15421577 (-)
G70894 NA non-coding upstream 93349 16118282 ~ 16120319 (-)
LOC122351188 NA non-coding upstream 580434 16605367 ~ 16631420 (-)
G70955 NA non-coding upstream 585337 16610270 ~ 16610561 (-)
G70956 NA non-coding upstream 588184 16613117 ~ 16613424 (-)
G70967 NA non-coding upstream 605553 16630486 ~ 16715102 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other downstream 234316 15771421 ~ 15771864 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other downstream 606743 15389218 ~ 15399437 (-)
G70549 NA other downstream 700205 15303103 ~ 15305975 (-)
LOC122351495 NA other downstream 1633506 14359646 ~ 14372674 (-)
G70317 NA other downstream 1752404 14196479 ~ 14253776 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other upstream 695871 16720804 ~ 16746222 (-)
G70986 pou2f1b,LOC107748141 other upstream 792207 16817140 ~ 16823775 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other upstream 861820 16886753 ~ 16889547 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other upstream 1210939 17235872 ~ 17255491 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other upstream 1339254 17364187 ~ 17521560 (-)

Expression


Co-expression Network