atp5po (atp5o,LOC107748167,LOC107569847,LOC107595838)


Basic Information

Item Value
gene id atp5po
gene name atp5o,LOC107748167,LOC107569847,LOC107595838
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 16117372 ~ 16120278 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248629.1
atgcatGAGCGCAGCTCTTGCGTATTTCTTCCCAGACGTGCACGCATGCGCAGTGCTTTTGACCTACACAGTCGCAGGAGAAAATGGCAGCGCTTGGAGTAGGGCTGCAGGTGCGTCAGTTTAGCACCTCTGTGATTCGACCAGTAGCAAAACTTGTCAagCCTCCTATCCAGGTCTATGGGGTGGAGGGACGTTATGCTACTGCCCTGTTCTCTGCTGCCAGCAAGCAGAAGAGCCTTGATAAGGTCGAACAGGAGCTTGGCCGCGTGTCTAGCCTGATTAAGGATCCTAAGCTGTCAAGCATCGTGATGAACCCTCATGTCAAGCGCAGTCTCAAACTGAAGACTTTCACTGATGCTTTGACCAAGGCAAAACTCTCCGCCATCACCATCAACCTCATCAatGTCCTAGCAGAAAATGGACGCTTGACCTTGACCCCTGATGTCATCACAGCCTTTGGTAAAATGATGAGTGCCCACAGAGGAGAAGTCACATGCTCCGTCACCACCGCTCAGCCTCTGGATGAAGCTAATCTTGCAGAGCTGAAGGTGGCACTGAATGGTTTCCTGGTGAAGGGAGAGACCATCAAACTTGAGACCAAGTCTGATCCCTCTATCCTTGGGGGCATGATTGTGAGCATTGGTGATAAGTACGTGGACATGTCTACCAAGACAAAGATCCAGAAGCTCACCAAGCTCATCAGGGAGACCTAAGTCCTGTGGACTGACCAGACCTAATCAAATCAAGATTCAGGGGGTGAAGAAAGAACAACCTCTCTGCTATTGTGTAGTTAAATAACCTTGTCcagttctgtttaaaataaatattattgtaacatttaa

Function

symbol description
atp5o Predicted to enable estradiol binding activity. Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in mitochondrial ATP synthesis coupled proton transport. Predicted to act upstream of or within ion transport. Located in mitochondrion and myelin sheath. Is expressed in several structures, including alimentary system; cardiovascular system; genitourinary system; integumental system; and nervous system. Orthologous to human ATP5PO (ATP synthase peripheral stalk subunit OSCP).

NR:

description
PREDICTED: ATP synthase subunit O, mitochondrial

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0015986 ATP synthesis coupled proton transport biological_process
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism molecular_function

KEGG:

id description
K02137 ATPeF0O, ATP5O, ATP5; F-type H+-transporting ATPase subunit O

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248629.1 True 842 mRNA 0.48 7 16117372 16120278

Neighbor

gene id symbol gene type direction distance location
LOC122351352 NA coding upstream 30161 16085809 ~ 16087211 (+)
vangl1 vangl1,LOC107690494,LOC107719814,LOC107731768,LOC107690599,LOC103036576 coding upstream 38781 16051417 ~ 16078591 (+)
nhlh2 nhlh2,LOC107570119,LOC107690628,LOC107719823,LOC107576851,LOC107690490,LOC108266261 coding upstream 72092 16042121 ~ 16045280 (+)
cnga4 cnga4 coding upstream 86860 16024987 ~ 16030512 (+)
ankrd50l si:dkey-145p14.5,LOC107569776,LOC107731753,LOC107719812,LOC107595839,LOC107690486,LOC107690620 coding upstream 121621 15982449 ~ 15995751 (+)
dop1b dopey2,LOC107673692,LOC107748165,LOC107690480,LOC107756791 coding downstream 1750 16122028 ~ 16144607 (+)
usp9 usp9,LOC107748163 coding downstream 32299 16152577 ~ 16180163 (+)
ddx3xa ddx3a,LOC107695499,LOC107673666,LOC107748156,LOC107565941 coding downstream 65249 16185527 ~ 16197489 (+)
nyx LOC107673668,LOC107748158,LOC107565934,LOC107595833,LOC107695501 coding downstream 77452 16197730 ~ 16203139 (+)
LOC122352000 LOC107673669,LOC107748159,LOC107565947 coding downstream 110260 16230538 ~ 16233056 (+)
LOC122352145 NA non-coding upstream 85204 16030874 ~ 16032168 (+)
G70700 LOC107595840 non-coding upstream 105218 15974481 ~ 16012154 (+)
G70715 zgc:112056,LOC107731744,LOC107570103,LOC107659887,LOC107595889,LOC107690602,LOC103039907,LOC108266095,LOC105908687 non-coding upstream 152708 15963820 ~ 15964664 (+)
G70603 LOC107690614,LOC107731751,LOC107719800,LOC107659892,LOC107595847 non-coding upstream 425185 15689198 ~ 15692187 (+)
LOC122351790 NA non-coding upstream 434350 15681003 ~ 15683022 (+)
G70743 rpl8,LOC106586796 non-coding downstream 33945 16154223 ~ 16183683 (+)
G70746 NA non-coding downstream 83514 16203792 ~ 16205690 (+)
G70753 NA non-coding downstream 86042 16206320 ~ 16206691 (+)
G70747 NA non-coding downstream 87827 16208105 ~ 16210772 (+)
G70748 cask,LOC107565944,LOC107749409,LOC107556744 non-coding downstream 92894 16213172 ~ 16215227 (+)
rabl3 rabl3,LOC107569739,LOC107690631,LOC107659889,LOC107595844,LOC107736356 other upstream 215652 15899427 ~ 15901720 (+)
plcl1 LOC107569711,LOC107731752,LOC107690606,LOC107719808,LOC107659890,LOC107595846 other upstream 327670 15734570 ~ 15789702 (+)
LOC122351678 hspe1,mob4,LOC107690609,LOC107595852,LOC107569672,LOC107731766,LOC106586370,LOC105016277,LOC100701317,LOC103156730,LOC101472107,LOC102310674,LOC102783361,LOC108238849,LOC107690608,LOC106582314,LOC105899369 other upstream 401471 15708201 ~ 15715901 (+)
si:ch211-168k14.2 si:ch211-168k14.2,LOC107681321,LOC107748618,LOC108441415,LOC105905900,LOC108266656,LOC107600399 other upstream 692011 15401127 ~ 15425361 (+)
LOC122351767 NA other upstream 1527933 14587082 ~ 14589439 (+)
G70814 NA other downstream 608229 16728507 ~ 16731361 (+)
mpc2b mpc2,LOC107695492,LOC107673680 other downstream 625615 16745893 ~ 16749701 (+)
si:ch211-218d20.15 LOC107748193,LOC107695487,LOC107756736,LOC107673701,LOC107597587 other downstream 796483 16916761 ~ 16919290 (+)
jam2b LOC107748130,LOC107673722,LOC107695483,LOC107595821,LOC107597562 other downstream 1083519 17203797 ~ 17208220 (+)
G71130 NA other downstream 1218849 17339127 ~ 17339622 (+)

Expression


Co-expression Network