LOC122351538 (ttn,ttnb,LOC107698997,LOC107716993,LOC107657493,LOC107601612,LOC107714355)


Basic Information

Item Value
gene id LOC122351538
gene name ttn,ttnb,LOC107698997,LOC107716993,LOC107657493,LOC107601612,LOC107714355
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 20737023 ~ 20746870 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248669.1
GGATACTACTTCCGTGTTTCAGCACAAAATCGTTACGGCAATAGTGAATCACTGGAGACTCCTTCTGCTATCCTCATCAAGAGTCAGCTAGAGAGGCCAGGAGCCCCATTAAAACCAGTTGTTTCTGCACTTACCAAAAACTCCTGTGTTGTGTCTTGGAAGCCACCTCTCAGTGATGGAGGCTCTAAAATTAAGAACTACTGTCTTGAAAAGCAAGACAAGAAGAAGGGTGAATGGGTTGCAGTTACGACAGATGAAATCCACCAGACTGTTTATTCTGTCAAGGGCCTGACAGAAGGTGTTGAGTATGAATTCCgtgtgaaatgtgaaaaccTTGGAGGAGAAAGTGATTACAGTGAAGTATCCGACCCTGCCATTCCAAAGATAGATGTTGATGTGCGTGCTCCTGCCTTCAAGGAAGACCTCAGAAACATGAGTGTAAAATTCAAGAGCAATGCAACATTTGTCTGCAAGATAACAGGACAGCCCAAGCCTGTAATAAAATGGTTCAAGCGTGGAAAGGAAATTCAAGCTGATGGCACTAAAATCAAGATACAAGAATTCAAGGAGGCTACCATCAGCTTGTTATTGCTGATTGTGATGCAGAAGACTCAACTGTATATCAGATCAGAGCAACAAACCAGGGTGGATCCATTTCTGCTACTGTTTCTCTAGATGTTGAAAtcCCTGCAAAGATTCATCTGCCTAAGAATCTGCAAGGAAAGGAAGCTATCCCTGCCCTTCGTGGTGAAGTGGTCAACATCAAAATTCCATTCAGTGGAAAACCAGATCCAGTTATTACTTGGCAGAAGGGACAAGACCTTCTAGATAATAATGGACACTATCAAGTCATTGTCACAAGATCCTTCACATCTCTTGTATTCCAGAATGGAGTAGAAAGGAATGATGCTGGTTTCTATATTGTATGTGCCAAAAACAGATTTGGAATTGACCAGCAAACAGTAGAGCTTGATGTTGCGGATGTGCCTGATCCACCACGTGGCATCAAAGCCAGTGATGTTTCGAGGATTCTGTAACACTCCACTGGGTAGCACCTGCCAATGATGGTGGAAGTAGAGTAACCAACTATATCATAGAAAAGTGTGCCACCACAGCAGAAAGATGGATTCGTGTTGGCCAGTCTCGTGATACCCACTATACTGTTGTCAATCTATTTGGAAAGACAAGTTACCAATTCCGTGTCATAGCTGAAAATAAATTTGGTCAGAGTGCACCATCTGAGGCAAGTGGACCTGTTGTAACGAAGGAAGACAAATCAAGAGTTCTCAACTATGATGAAGAGGTTGATGACACCAGGCCAGTTTCCAAAACCAAAGCTCCTCACTCAGAGGCTAAGAATGTTCATAACAAGTACATGATTGCTGAAGAGCTTGGCCGTGGACAGTTTGGTATTGTTCACGGTGCATTGAAACCAGCTCTGAGAAAACTTACATGGCTAAATTTGTCAAAGTTAGAGGTGCAGATCAGGCAATAGTTAAGAAAGAAATTGCAACACTAAATGTGGCACGCCACAAGAACTTCCTCTTACTGCATGAGTCATTTGACTGCCCTGAAGAACTAGTCATGATTTATGAGTTCATTTCTGGTGTGGACATATTTGAACGCCTTGGTACAGCCAATTTTGAGCTCAATGAGCGTGAAGTTGTTAACTATATCAGACAAGTATGTGAAGCTCTTGAATTCCTTCACAGCAAGAGTTATGGCCACTTCGATATCAGGCCTGAAAATATAGTCTACACCACAAGAAAGGGAACTAATGTCAAGATCACTGAGCTTGGACAGTCTAGACACCTTACACCTGGTGACCAAATTAAGATTCAGTACATGACAGCTGAGTTTGCAGCACCAGAAATTCATCAGAATGAGATGGTTAGCACCGTGACAGATATGTGGTCTGTCGGTGTCCTTGTGTATGTTCTTCTTAGTGGACTTAATCCATTTGCCGCTGAAACTAATCAGCAAATGATTGAGAGCATTTGCAATGCTGAGTACAGTTTTGATGACGAAGCCTTCAAGCATATAAGTGTCGAGGCATTAGACTTTGTTGACCGCCTACTAACCAAAGAGCGTAAACATCGTATGACTGCTGCAGAGGCTTTGAATCATCCTTGGCTGACAATGAACTCAGAGCAACTGAGCACTAGGACCATCAAGATTACTCGTCACAAGAGATATTACCAAGCCATGGTTAAGAAAGAATGGAACACTGTTGTCTCATCTGCTCGTATTGCCAGTGGTGGTGCTATCAGAAATCAGCGGGAGTAACACTCTCTAAAGTCAAGATTGCACCATTTGAACATGGACCAGTTGCAGGACAAATTAAACACAGTGTTGCTGACGAAGGTGATGATATCAAGCTCATTTGCAACATTGATAACTATGATAGTAGCACGGAAGTAACATGGTACTGTGGAGTAAGACAACTAGAAGAAGGTGCTAAATACGAAATTGCTTATGAAGACGGGCTTGCTTCCATAACTATTAAGGCAATCACAAGAACCGATGATGGAACATACAGATGTAAAGTTGTCAATGAGTATGGTGAGGACAGTGCTTATTCTGAGCTCTTTGTTAAAGGAGTAAGATCCTATCGTGAGTTCTACACTGCACGTGTTGTAAAGAAAGTAAAACGCAGAGTTGACACAGCAAGACTACTCCAAAGACCTCCTGAATTTACTTTGCCATTGTGTAACCGCACTGCTTACATTGGAGAGGATGTGCGCTTTGGTGTCACAATCACAGTGCATCCTGAACCACGTGTGATGTGGTTGAAAACTGGTCAAAAGATTATGCCAGGAGATGATGACaagaaatacacttttattagtGATAAGGGCCTGTATCAGTTAGTTATTCACCATCTTGACCCAGATGATGATGCAGAATACACTGTTGTGGCACGGAACAGATTTGGTGATGACAGTTGCAAGGCTCGTCTCACAGTGATACCTCGTCCTGCTCCTGCTGATAACACCTTGAGACCTATGTTCAAACGTGTTCTTGCTAACTTGGAATGCAGAGAAGGCCAGAGTGTACGTTTTGAAATGAGAGTGTCAGGGCATCCCTCATTGAAATGGGAGAAAGATGGCATGCCTTTGGCATTTGGTCCACAAATTGAAGTTGTGCATGAAGGCTTAGATTACTATGTCTTACATGTAAGAGATACTCTTCCAGAGGATTCTGGCACATACAGGGTCATTGCAACTAACTCAGCTGGGTCTGCAAGCTGCCAATCCACACTCAAGGTTGAACGTGTGACACACATCAAGAAGGAGGAAAGtgaggaagaaaagaagaagaaacatgaTCTTGATCAGCAAGAGATGGACAAAAAAGTAAGACTAACCCAGATACTAGCAGGTGCAGATGTTACCCCACTTACTCCAGTTGCACAGCAGGCACTAAGAGAAGCTGCATCCATGTTCAAGCCAGCAATCACTACCAAGAAAGTCAAGAGCGAAGCTGAGGAAGCcaaagaaaaggaagagaaaaagaaaagagcagaagAAAAGAGGCTGAGAATGCCATATGTTATTCCTCCACCTCGTGTTGTTGCTCCAACTGCTCTTGAGGAGGACATGGAAATCAAACACTTTGTGCCTTTCTCTGATATGAAGTGGTACAAGAAACTACGTGATCAGTATGAGTTCCCAGAGCCAATGGAAAAGTTCCCCCAGAAAAGACTTAAGCGCATCCGACTGTCAAGGTGGGATCAGTTCTATGAAGTACCTCTGCCAAGAATTAAAGACCAATACAAGCCAAAATGGCATATTCCAGTTTCACAAGATGACCTTGAGACTGTAAGGCCAGCAAGACACCGCACACCTTCTCCAGAAATGGAGGCTTACTACAGAATCAGGAGACGCTCTCTTGGTGATCTTTCTGATGAGGAACTGCTTCTGCCTGTTAGAGAGTACTTGTCAATGAAGAGAACAGAGGAAGAAAGACTTAAACTAGAGGATGAACTTGAATTAGGCTATTCTGCTTCTCCACCAAGTCTTAGCCCTGTACGCTTTGAACTCTCTGCACTGCGTCACCCGTCACCTAAGAAAGCTGCATATGATGAGGAGGAAGGGGAAGAAGTTCCATCCTATGACTCCTATCGCATTCCATCTAAATATGAGGCTGGTCCAAGCTATATTGACTTACGTCAGCGTCACGATAGGGCAACATACAGACCTCCAAGACAAAAGCAAAGATTATATGAGGAAAAAGAGGATCAAGAACTGCTTAGGTCAGTAACAACAACCACAAAGTTAACGTCCTACAAGAGCAAACTGCAGCACATTGAGTTTGAGGAGAAAACAAAGGTCAAAAGAAAGGAGAAAACAAGGGTGTCTATGTCAGCAGTAACTGAGGCTGCAGTCATAACTGATATGCCTACAACATTTGTTCCTGGCTATGCTACAGCAACTCGTCCTAAGAAACCTTCTGCATCTCTGGCAGAAAAAGAAGTGGTTAGAACACCTTCACCTGAAAAGACACGCCCACGTTCCCCCAGCTTTGAGAAAGCAGACACTACACCAGACTTATCAACAAAAATTGATTATATGTCAAGGTATGAGTCAAGAAAGAAGGCCttgaaaactgaaagaaagtTCGAAATTGTGACCCAGGAGCCTTTTACCCTTGACCATGCTCCAAGAGTGACTGTAAGAATGCGCTCTCACCGTGTGCCAATTGGTCAGAACACTAAATTCACACTGAATGTCCAATCTAAGCCAGAAGCACAGATTAAATGGTACCACAATGGAGTTCAAATTGAAGAAAGCAGAAAATACCGTATGTTTAACATGAGTGGCGTTTTGTCTCTTCAAATCATTGATTGTCAGGAAGAGGACAGTGGCACCTACCGTGTCGTCTGCACAAATGCAAAGGGAGAGGCCTCTGACTATGCCACTCTCGATGTTGCTGGTGGTGGATTTTCTGCATATGCCTCACAACGTAAAGATGAGGAGCCACCAACTTCCTTTGTCCCTGAGATGACAAAAACAGATGTTTATCATGTTTCATCTACAAAAGCAGCATCTGTATCAGAAACACAAGTGGAAGTATCCGAAACTAAAACAGACAAGATAGAAGAGACAATTAAGACTGTTGTTCAGGAGAAGCAAGTAACATCTGAAATCAAACTTGAAACTATGGAAGTGACAGCAGTTGAGGATGTTGTGGTAGAAAAAATTTCTGAGACTAAACTTGAATCTACAGAAGTGAAAACATTCGTGGAAGAAGTGGTTGAGGAAAAGAAGTCAACTCTCCCAGCCACAATTTTGACTAAACCACAATCACTAACAGTGTCTGAGGGAGAATCAGTTAAATTCACATGTGACGTTGATGGTGACCCTGCACCCACTATAACATGGATGCGAGAGGCACAAGTAATTGAGTCATCTCATCGTCACCATATTACCTCAACTGAATTTAAATCAACTTTTGAGATTACCCAAGTTGAAATGTCAGATGGAGGTAATTACACTGTAGTGGTACAGAACTCTGAAGGTAAACAGGAGGCACAGTTCAGCCTAACTGTTCGTAAACCAACACCTGTACAGAAAGTTGTTGCTTCTCCTCCTAGAGTGAAATCTCCAGAGTCTCGTATAAAGTCACCATTTGGAATTAGGTCTCCACAGAGAATTAAATCACCTGAACCAATTAAATCTCCACAAAGAGTTAAGTCCCCACCCATGGTAAAATCACCTACtcctaaagaaaaaacatccaAGCCAACCTTTTCAACTGAACTCAAAGACATCTCAGCATCTGCAGATACTATTATAAAGCTTACAGTGAAAATGTGCGGTGAGCCTAAGCCATCAATCTCTTGGATGAAAGATGGAAAAAACCTCTCTCAAGGTGGAAAATATGAAATCTTTGAAGAACATGGTTCAGCACATCTTGAAATCTATGAAGCTGATGTCTCTGATAGTGGAGTATACACATGTACAGCCAGAAACAGTGCTGGATTTGTTACTACAAACTGCACAGTTACTGTTCAAGCACGGACAACAACAGTTGCAGTGGAAAGAAAAGCAGAGTTGACAGAGCAAATAGTGAAAAAGGAGATTGCCTATGAGGAAGTACAGTCCTTTACAGAAATGAAAGCATCAAAAACCCAAATGACGATGAGTCAAGGTCAGACTATTACACTACGAGCCAGCATACCTGAAGCCTCCGATGTCAAATGGATCCTAAATGGAGTCGAGTTATCGAATTCTGAGAACTACAGATACGGTGTGTCAGGAAATGATCACACCCTGACAATTAAAAGCATCAGCCATCATGACCAGGGAATTCTCACATGTGAGGCCAAAACTGAACATGGTGTAGTCAAATGCCAGTTTGACACGACCGTCAGTGCTATGCGCTCAAATGCACCAAGTTTCCATGTGCAACCACATTCCCAGAATGTAAACGAGGgacaaaatgtcacatttacatGTGAAATCACTGGTGAACCTTCTCCTGAAATTGAGTGGCTCAAGGATAATTCAACAATATCTATTACATCGAACATGAAATTGAGCCGGTCTAAGAATGAGTACACACTTGAGATTCACAACGCTACCATTGAAGACAGTGGAAAATACACAGTAAAAGCAAAGAACAAATTTGGACAGTGCTCTGCAACAGCATCACTGAATGTCCTCAGTATACCACCAAAGATTGAGGCTGCTCCTCAAGATATCAGTATTGAGTCAGGAAAGGTCCTGACTGTAGCCTGTGCTTTCACTGGAGACCCAACCCCTTGCACAGAATGGTCACATTCAGGGAAGACACTGCCCAGCAAGGAGGAGAGTGGACGATTGCAGATTGAGACTTCTCAAGATGTCACCACTCTTGTTATCAGTGGAGTGAAAGAGACTGATGCTGGTGCATACACCTTAAAGCTTTTTAACGAGTTTGGTTTTGATACCACTACTGTCAATGTCAGGATTcgatcaatgtaaaaaaaaaaaaaaaaaaaaaaaaaaaattatataatagcaATACAATCATCACCCCATTTCCCTCATTcaaatcctttttatttatagaatgagaaaaaaatactgttcttGATAAAGACCTGAATTTCTGTTCTTgtaaatatgaacttttttcttttttttttttaaccaaacttGACATTCATTTATGCCAAACTAGACTAAAGTCTAAAGTTGTTATAAAATGTGCCATATTGGATAATTATGATCAGAAGTTCAGCACCATTTTGTGACATGTACATAATGTATATAGCCGAATTTACCGGTTATGGAAAATGTATGAATTGTTATTTAtgacaatattaacaaatgaaacaaaaggaACTAAATGTTTAACAGGAGAAAGTTTCACATGGAACGAATACCCTGTTAAACCTGAAACGAAACGAAACTATGTGCCTCAACAAAAAGTTGAAGTCTTAAGATTGCCTCAACAGGTAGAGAGGCTCCCTGTTGAAGTTAACTAAAATCAGAGAGACAAAGATATGCACTGCACATTTGTGCGTGCAGTAAAGCAGTATACAAGAATTTATGATTTGAACATAAGACCTTGAGTGCTGTTTGCATTACCCTCATGTAAGCAGGATGACTAGGCCTTGTGTTCAGACTGATTAAGTCATACCACCATTTTAATGACAAGCTCAATGTGCGAGCGGCCTGCacaatgagtaaatgatgatgttAGTGCACAGTTTCTGGCAATGGACTGTTTGAATTTTGATTTTATGAAAGTAACATCACCTGGCCATTCATTGTAAAATCAATTCAAGTGCTTCTTTGCAGAAGCTGTGCCAACTCTTGGAGGATTGCTAagttatattttgtgtgtttgtgtgtgtgctagcATTAGAATCTCACTTTGTCAGCAGCCAGGGTATCCATCATGTAACCACAGAGACTTCATGTGCtgtgcaaagaaaagaaaaatacatggaTGTAATACCCTGCACATTGATTTATTAGAACTAATTTATGTAGGTTTACCCATATATTCAGCCTCCTTGAGTTTTATGAATTACTGATTTAATAAAGCATGTTTTCAGCACCATaaaa

Function

symbol description
ttn Enables several functions, including cytoskeletal protein binding activity; enzyme binding activity; and protein kinase activity. A structural constituent of muscle. Involved in several processes, including mitotic chromosome condensation; myofibril assembly; and protein kinase A signaling. Acts upstream of or within detection of muscle stretch. Located in condensed nuclear chromosome and sarcomere. Implicated in intrinsic cardiomyopathy (multiple) and myopathy (multiple). Biomarker of coronary artery disease and dilated cardiomyopathy.

NR:

description
PREDICTED: LOW QUALITY PROTEIN: titin-like

GO:

id name namespace
GO:0014866 skeletal myofibril assembly biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248669.1 True 8060 mRNA 0.41 8 20737023 20746870

Neighbor

gene id symbol gene type direction distance location
LOC122351555 fkbp7,LOC107562709,LOC107717008,LOC107657501,LOC107584168,LOC107714366,LOC107698996 coding downstream 5246 20729340 ~ 20731777 (-)
col5a2a LOC107584152,LOC107657512,LOC107714354,LOC107717009,LOC107699008,LOC107562716 coding downstream 18482 20694560 ~ 20718541 (-)
LOC122351543 glsb,LOC107660591,LOC107728921,LOC107602138,LOC107714384,LOC107657529,LOC107565021 coding downstream 259290 20448104 ~ 20477733 (-)
LOC122351552 LOC107698997,LOC107562717,LOC107716993,LOC107601612,LOC107657493,LOC107714355,LOC108435066 coding downstream 300122 20435745 ~ 20436901 (-)
LOC122351726 LOC107698997,LOC107716993,LOC107601612,LOC107657493,LOC107714355 coding downstream 308306 20426727 ~ 20428717 (-)
LOC122351730 ttnb,LOC107657493,LOC107714355,LOC107698997,LOC107601612,LOC107716993 coding upstream 1005 20747875 ~ 20750613 (-)
LOC122351731 ttnb,LOC107698997,LOC107714355,LOC107657493,LOC107716993,LOC107601612 coding upstream 3782 20750652 ~ 20751262 (-)
LOC122351558 LOC107716993,LOC107698997,LOC107601612,LOC107714355,LOC107657493 coding upstream 4399 20751269 ~ 20752980 (-)
LOC122351732 ttnb,LOC107657493,LOC107714355,LOC107601612,LOC107716993 coding upstream 9026 20755896 ~ 20757113 (-)
LOC122351733 ttnb,LOC107698997,LOC107716993,LOC107657493,LOC107601612 coding upstream 13176 20760046 ~ 20761027 (-)
LOC122351564 NA non-coding downstream 99601 20632693 ~ 20637422 (-)
LOC122351561 NA non-coding downstream 134466 20601984 ~ 20602557 (-)
G71940 NA non-coding downstream 228321 20504268 ~ 20508702 (-)
LOC122351562 NA non-coding downstream 302054 20434116 ~ 20434969 (-)
G71924 NA non-coding downstream 347324 20378652 ~ 20389699 (-)
G71957 ttnb,LOC108435066,LOC108266290 non-coding upstream 10748 20757618 ~ 20758206 (-)
G71981 NA non-coding upstream 446195 21193065 ~ 21193278 (-)
G71984 NA non-coding upstream 459345 21206215 ~ 21206762 (-)
LOC122351567 NA non-coding upstream 486316 21233186 ~ 21245785 (-)
G72024 NA non-coding upstream 682258 21429128 ~ 21430341 (-)
G71938 nab1,LOC107565022 other downstream 233133 20489164 ~ 20503890 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other downstream 843708 19881550 ~ 19893315 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other downstream 884398 19833920 ~ 19852625 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other downstream 907548 19796252 ~ 19829475 (-)
ankar ankar,LOC107728908,LOC107660654 other downstream 1005229 19719942 ~ 19731794 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other upstream 962418 21709288 ~ 21726820 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other upstream 1424593 22171463 ~ 22223667 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other upstream 1550137 22297007 ~ 22511307 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other upstream 3183337 23930207 ~ 23931329 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other upstream 3197115 23943985 ~ 23960325 (-)

Expression


Co-expression Network