fer1l6 (fer1l6,LOC107752896,LOC107596537,LOC107738098)


Basic Information

Item Value
gene id fer1l6
gene name fer1l6,LOC107752896,LOC107596537,LOC107738098
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 7921678 ~ 7938502 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248743.1
AGTCAAACAGACGTTTGGGGAGGAAGTGCGCTCACTGTCTCGCTGGACGGAGTGAGTTACAGTCACAGGATATTTTATCTTCAATGAAATTCTCCTGAAGGAATGGACCGAGATAAAGACAGCACCGCGCCACATGGCAAAATGTTTGGAATAAAAGTGAAGAAGAAACACAGGAAAGGACACAAGGGTGTTGTAATCGCAAACAAAAACGCTCTAGAGGCTGAGCCTGAAACTAATCCTGATGATCCAGATGTGGTAGACGTACCCCAGCCTGGACTCTCTGAAGCGTCCACCTCTGCACCTGCTTCCTTCAGACAGGCGGTTTATGCTAAGAGGTGTAAACCTATGGCCAAAATCTTGGAAGGTGAAAGCAAACCACAAAATTTCCAGATCTCCATCAATATAACAGAGGCCAGGCAGCTAGTCGGGGACAATATAGACCCTAGTGTCGTGATTGAAATTGGAGATGAGAAAAAGCAAACATCTGTGAAAGAAGGAACCAATGCTCCCTTTTACAACGAGTATTTTGTGTTTGACTTCTATTGCAATCAAGACATCTTTTTTGACAGAGTCATCAAATTATCTGTCATGCACTCAAAGATCATGAAGAGCTTCTGTGTGGGAACCTTCAAGATTGATGTTGGGACAGTTTACTCCCAGCCTGGTCATCAGTTCATCAATAAGTGGGCCACTCTCACAGACCCCGCTGACATCCGCATTGGGGTGAAAGGTCACCTGAAGTGTGATATCAGCGTGTCAGGAAAGGGAGATGTTGCGGCACCATCTCAAAAGTTCAGTGATGCTGAAGAACAGATAGAAAAACATCTCCTGCTTCCTGAAGGTTTAAACCCTGAGCGGCCGTGGGCTCGTTTCTATGTGATTGTGTACCGTGCCGAGGGTCTTCCCAGGATAAACTCCAGTATTATGGCAAACGTGACCAAAGCCTTTGTTGGAGACACGACAGCCCTCATAGACCCTTATGTAGAGGTGTCGTTCTTCGGGCAAGTTGGCAGGACGTCTACTCAGAAGAGCACAGCAGACCCAGTGTGGAACGAGCAGGTGGTGTTTAAGGAGATGTTTCCTCCATTGTGTCAAAGACTGAAGATACGGGTTTTAGACGAGGGAAGCATGAATGATGTGGCCATTGGGACTCATTACATTGATCTACACACCATCTCAAATGACAATGATGGAGACAATGGTTTCCTGCCCACGTTCGGACCAGCGTGGATCAATCTCTATGGTTCACTTCGTAACTCCACATTGGTGGACGACAGCCAGGAGCTGAACGAGGGTGTTGGAGAGGGGGTGTCCTACAGAGGCAGGGTTTACATAGAGCTGAGTGTGGAGATCCTGTCTGGAGGTGCTCCCGACTCTAAATCCATGCTCTCAAAAATCAGTCTGAAGGATACCAAAGGAGGAAAACCTGGGGCGAAAGATCCCAAAACTGGGCCTGGagccggaggagaggaggagaagtcTAAGACTATTGGGCCTGAGGTGATGCCAGTGGAGCCCCCACAGAAGATAAATGATGAAGACATGGAAACCTTCCTGCTCTTTGGCTGTGTTTTTGAGACCTCCATGATTGACAGAAGAATCGGCGATAGACCTGTCAGCCTCGAGTTCACCGTTGGTAACTTTGGGAACTTAATTGATTGTACTGCACCGCCTCCTTCAAAGAAAAAGTTTGAAGATGTGTCGGTGACCACTCCTCTACTGGACACTGCAGCAACAATGCCATGCAAATCTACTACAACACCAGAAAGACCTCTTTTTGGAGATGCACAGAGGCATTATATGCACTTGCCCATTGGAGCGCAGAAGccctgtgtgtatatttatagcagCTGGGAGGATCGAGCGTACCGACTCCATCACGCCAACATGCTGGACACAATTGCTCTGATGTTTGAGGAGGGAGTCGCGAAGGTGGCAGAACTGGATAAAATGTTGTCCCCAGAAGCTGGGACTCTCATGCATCATATTCTTCGGGAATTTAGAAGAGATGCCAGTGAGTTTATTGCTTTTGCTGAAAAGAAGGTGAAGGGAAGCAACTTGACCTTACTGGATAAAAAGAGGCTTACTCTGTGCAAACAGGAGCTGGAGAGCATGACGGAAGTAGCAGGAGGACTCATTGAGCCCAAGAGGAGATCTTTGACTGTAAAAGAGATGATGCTGGAAGCccagaaaattaaaaagaaactcaGATTCCTTGTGGAAGAGCCTCAACACACTTTACcagatgtgtttgtgtctctggtCAGTAATAACAAGCGTCTGGCGTATGCCAGAATCCCTGCCCGTCATCTGCTCTTCTCACAGAGTCCGGAGCAGAAAGGCCGAGACTGTGGGAAGATCAAGACCCTCTTCCTCAAGCCTCCAGGGAAGCGTGGACCAGGATGGACAGTCCAGGCTAAACTTGACGTGTATTTATGGCTGGGAACTAGCAGAGATTCATCCCACATGTTGGACAATCTCCCATCAGGCTTTGAACTGGAAGGCATCTCATCTACGGACAGGACTGGCCCTCCTCCTGATTATTTACTTTACACAGAGCAGCACTTGTTCCAGCTGAGGGCTCATATGTACCAGGCCCGAGGTCTCATCGCAGCAGACAACACGGGCCTCTCAGACCCCTTTGCCTGGGTGTCTTTTCTGTCCAGTAGCCAAAGCACTGGTATCATCAAGCAAACACTGACTCCCACATGGAATCAGCTGATCCTGataaataatgtgtatttgtgtggaGGGCTTTACGAAATAGTCCAGGAGCCACCGCTTGTTGTGATTGAGGTGTATGATGATGATGCAGTGGGTATAGAGTACCTGGGCTCGACGGTGGCTGTCCCTGTAGTCAGGCTGTCAGATGAGCGGTACTCTCCTCCTCAGCTGCAGTACAGCCCTCTGTTCTGTGGCGGTCTTTCAGGAGGAGACATCCTGGGAGCGTTTGAACTCATTCAGATCTCAAAGTCAGGAGAACACCCACTTCCTGATTTAGATGAGCCAGATGGAGGGGTTATCCCAGTACCCTCATACATTCGACCTGTGCTCTGCAAGTACAGAATTGAGGTTTTGTTCTGGGGCCTCAGAGAATTGAAAAAggttcagcttttatctgtcgATCGGCCTCAAGTTTTTATCAAGTGTGCAGGAGGTGGTGTCAACTCTTCAGTGATACAGAGTTACAAGAAAAACCCGAACTTCACAATACTTGTGGATGCCTTTGATGTGGAGCTGCCTGAAGACGAACACCTCCTTCCTCCTCTCACTATCACTGTGGTGGACTGGAGGGCCTTTGGGCGGAGCACGCTTGTGGGTAGTCATATGATCAACAACCTGGCCTTATTCAAACACATCCCCTCACCTATTCAACAGCCCCAACCAGAACCCAGAAATATAGCAGTGGCTCAGCTGTCTCTGCAGCAGAGTGTTGTTCCACCGCCTAATGAGGAGATTGCCATCGAAATAGATCAGGAGGAAATAATCACCCCTTTCCCTAAAACTGAGCCAGACTTCCAGGACAAGAAGGTGTCGAAGAAGAGCAAACGAAGGTCTACGAAAAGGAAGAAACGCACTACAGCTGATGAGTCTGCTGATAATGTCATTGATTGGTGGTCGAAATATTATGCATCAATGGAGAAGATCCAACTGgcaaagcaaaaagaaaacaatccaTTTCCTCTGCTCTTTGAAAACATAACTCCTCTGGAGAACATTATTTCCGAAGGACTGATCAGTCTGGCTTCAAACATTAAGGACAAGAAAAAGGAAGTGAATTACAAGAGTGTGACAGAACAGCCCAGACTAGCAACGCTCCAGGTGTATGACAAAGAGCTGGAGGCTGAGTTTGGGCCTTTTGACGACTGGGTGAAAACCTTTGAACTCTATCGAGGAAAGGCCAATGAGGAAGAAGGCTCTGCTGACGACAGATTTGTTGGAAAGTTTAAGGGCAGGTTTTGTCTGTACAAGCTGGCAGAAACGGATAATGAGGAGGAGGATGGATATTTGGATTCTGGgcagtttaaaataaaccagGGTATTCCTCCGAACACTGCAGTGGATGTACTTATCCGTGTGTATGTAGTTGCAGCCTTCAACCTGCACCCTGCGGACCCAGATGGCAAAGCAGATCCTTACATAGTTCTGAAACTTGGGAAAACTGAGATCAAAGACAGAGACAATTACATCCCAAAGCAGCTCAACCCGGTGTTTGGAAGATCCTTTGAATTTCAAGCCACTTTTCCCAAGGAATCCCTGCTAACTATTCTCATCTATGACTATGACACTATCGGCGGAGATGATTTGATTGGAGAAACACAGATTGATTTGGAGAACCGTTTTTACAGCAGACATCGAGCCACCTGCGGCCTGCCCACCGAATATGCCATTGAGGGTTACAATGCCTGGAGGGACTGCATGAAGCCAACAGAACTGTTGATTAAGCTTTGCAAAGAAAACAGACTGGACAACCCTCAATTTTCTCCGGGACGTATTACCATTGGCAGTAAAGTTTTTATGGGGAAAACTGTATTTGCTGATGAAGatcagatggtggagtCGTACGAGCACCTGGCTCTAAAGGTGCTGCACAGGTGGCCTGAGATGCCCAACGGGGGTTGTAAACTTGTGCCAGAGCATATCGAAACTCGCGCACTCTACCTCAAGGACAAACCAGGAATAGAACAGGGTCATCTACAGATGTGGGTGGATATTTTTCCAATGGATATGCCTCATCCTGGCCCTCCTGTGGACATTTCCCCTCGCAAACCCAAAGGgtaTGAGCTGAGGATCATTATCTGGAACACTGAAGATGTAATATTGGAGGACACCAACTTCATAACAGGACAGCAGTCAAGTGACATTTACGTCAAAGGatggTTAAAGGGGCTTGAAGATGACAGCCAGGAAACTGATGTCCATTACAATTCTCTGACTGGAGAGGGTAACTTCAACTGGCGCTTTGTGTTCCCCTTTAACTACCTGCCAGCTGAGAAAGTGGTGGTGGTACAAAAGCGAGAAAGCATCCTCTCTCTGGACAAAACTGAACAGAAGATCCCCGCAGTCCTTGTGATGCAGGTGTGGGACTTTGAGAGGCTTTCTTCTGATGACTTTCTGGGCTCAGTGGAGTTGGACCTGCATGGGTTTCCACGTGGAGCTAAATCAGCTAAAGTTTGTAAGATGGAAATGCTGACAGAAACCACAGAAAACATCTCTATCTTCCAGCAGAAACGCTCCAAAGGCTGGTGGCCCTTCATTAAAGCTGGAGAACTCACAGGGAAGGTGGAAGCAGAGTTTCATCTGGTAACAGCTGAAGAGGCAGAGAAAAATCCAGTGGGACGTGCACGCAAAGAGCCAGAGCCTCTAGAGAAACCAAATCGTCCAGACACTTCCTTCTCCTGGTTTATGAACCCTTTCAAGTGCTTCTTTCACCTGATCTGGGGGAACTACAAGAAATACATCATTGCCGGACTGGTGCTGCTGATTGTGACCCTGTTCCTGGTTCTTATCTTCTACACCCTACCAGGGGCAATCAGTAGTAAGATAGTCAATGGCTAATCACACACCCGGATTAAGTAACTGGACACCAATGGGAACAGATTTAACTACTTTTCATTGTTGCTTTAATGaagcaaatatttacagtaaatgcttgCTCTGCAGGCAGAACACAACTAACTCGGTTGATTTTagcatcttttatttaattcacacCAACAAATGTAATACTTACGACATTACATGTTTATTCATCttcaaacaacataaaacactGAACATAGCAcatgaaaactgtaaaaaactaATGTTTATAAATCGCATCCCACCTACTGTAAACCGTTGAACTTTTGTTCTACTGTAGAgctttcaaactaaataaatgattgttaaGTGACTTTAAGACAGAATAACTCAAAAATGATCAGTTGTGTAAATACAGTGACATAAAACAAGCAACCACAACCCCAATGAGtccatgtaatgtaaatttgtGATTGTTGCAAAgggttaaaataacatttattcacCGTCTTTGTGAAACATACTGTGTATCTAAAAATGATAGTGTTTTATTCTCAGCTGATTGAAATTCCTTGTCATTTCTCAGAATGCtaattaaactgaatttaacTG

Function

symbol description
fer1l6 Predicted to enable metal ion binding activity. Acts upstream of or within cardiac muscle tissue development and skeletal muscle tissue development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including gill; gonad; heart; integument; and muscle. Orthologous to human FER1L6 (fer-1 like family member 6).

NR:

description
PREDICTED: LOW QUALITY PROTEIN: fer-1-like protein 6

GO: NA

KEGG:

id description
K22127 FER1L6; fer-1-like protein 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248743.1 True 6135 mRNA 0.46 42 7921678 7938502

Neighbor

gene id symbol gene type direction distance location
prkag3b prkag3b,LOC107738101,LOC107596559,LOC107752899,LOC107668376 coding upstream 1116 7908087 ~ 7920562 (+)
ttll4 LOC107738099,LOC107688755,LOC107752897,LOC107596548,LOC107593000,LOC107668375 coding upstream 14374 7893615 ~ 7907304 (+)
abcb6b abcb6b,abcb6a,abcb6,LOC107688753,LOC107596549,LOC107716755 coding upstream 40644 7855221 ~ 7881034 (+)
nrp2b nrp2b,LOC107688766,LOC107752901,LOC107668386,LOC107716756,LOC107596550 coding upstream 99784 7756774 ~ 7821894 (+)
pard3bb pard3bb,LOC107688750,LOC107716778,LOC107721601,LOC107668384,LOC107593023 coding upstream 192887 7473998 ~ 7728791 (+)
raph1a raph1,raph1a,LOC107752894,LOC107592998,LOC107688759,LOC107668371 coding downstream 23905 7962407 ~ 8017887 (+)
fzd7a fzd7,fzd7a,LOC107751502,LOC107752890,LOC107668396 coding downstream 231664 8170166 ~ 8172963 (+)
LOC122351256 LOC107668397,LOC107593014,LOC107752910 coding downstream 238333 8176835 ~ 8202936 (+)
ankzf1 LOC107677786,LOC107749886 coding downstream 404720 8343222 ~ 8349525 (+)
myo10l3 LOC107677785,LOC107749884,LOC107752883,LOC107668373 coding downstream 428160 8366662 ~ 8426929 (+)
G68446 NA non-coding upstream 67400 7853481 ~ 7854278 (+)
G68435 NA non-coding upstream 585319 7335491 ~ 7336359 (+)
G68397 desma,LOC107688742,LOC107602901,LOC107716787 non-coding upstream 620183 7280767 ~ 7301495 (+)
G68424 NA non-coding upstream 657965 7262541 ~ 7263713 (+)
G68401 NA non-coding upstream 662284 7256680 ~ 7259394 (+)
G68668 NA non-coding downstream 265351 8203853 ~ 8205963 (+)
G68678 NA non-coding downstream 284085 8222587 ~ 8222817 (+)
LOC122351403 NA non-coding downstream 662222 8600724 ~ 8614984 (+)
G68808 NA non-coding downstream 887710 8826212 ~ 8827046 (+)
LOC122352063 NA non-coding downstream 920971 8859473 ~ 8860379 (+)
LOC122351907 LOC107670338,LOC107721263 other upstream 1948555 5962884 ~ 5973123 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other upstream 2035925 5883927 ~ 5885753 (+)
trnam-cau_112 NA other upstream 2464149 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 2464415 5457191 ~ 5457263 (+)
trnam-cau_111 NA other upstream 2464835 5456772 ~ 5456843 (+)
si:ch211-167j6.3 NA other downstream 402793 8341295 ~ 8342751 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 492609 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 522242 8460744 ~ 8506143 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other downstream 924885 8863387 ~ 8866305 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other downstream 928595 8867097 ~ 8871633 (+)

Expression


Co-expression Network