XLOC_006563 (AL954359.1)


Basic Information

Item Value
gene id XLOC_006563
gene name AL954359.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 20227045 ~ 20231750 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012695
AAACAAACGCAGTTTCTTAACGGTCGTTTAGCAATCTTTTGTCCGTTTTGTCTCCTTATTTCGGTCGCGAAATGAAGATAAAATACGTGTTTGTTGATATATTAACTGTAAATGCCATTCACATATGAACACTAACGTACCacagttaaaataaaaagtcacggTCAAAGGACAAAAGAGAGGGCTACGTTTTTTGGAGAAGCTGGACCATTTTGACCTTATCATCTTCAGCGGTATAATTCAGCGAAATCAGTGATGTGCAGGGGTTTAAAAAGTACAGCTTGGGAAATATAAAGATGATGGTTATTTTAAAGAAGAAGCCTGACACATTGGAGACTTAACCATCTTCAAAGGACAATGCTACAATTCAAGGAAGTCGACAGTTGTCTCAATTATAcagttttgccttttttttgTACCATAGTCTAAGTTTGTATTTTGATTGCCTAGAAGGTAATCGTTTACATCACTTTGGGAGAGGGAGTGAAAACGGGCAGTCAATCAGTGTCTGAAAAGAGAAAATACACCCAATACAGAGGCTAGTAAGGAGCACTTCCAGTGCACAAAGTTAATGTCTTAACAGATTACAAGATCAAGTCATTAACATGAACCAAAAGGACAAACTCGTCAAAAGCAAAACTCACTTTCCCTTGGCTTTTCTTTCCCTTTTCATCacgggtcatcacagcagaatgaactagcAATTACTGTGGTACATGCTTTTTTCACCAGATGCTCTCATATGCAGAATtgaccagagcacccgaaggaaacccacgcaaacatggggtgaacatgcaaactccacacctgGCACacctgagactcgaaccagtgaccttcttgctttgaggcaacagtgatgACCACGGAGCTACCATGTGGCCCCTTTTGTATTCACATTATATTAGTGACAGTTTTCCCCTCAAGGTATTTCAGTAAATAATTGTTGTG
>TCONS_00012696
ATTCGCGGCAACGCGCGCGTTGTCCTGACAACAAGGATTCACAAACAAACGCAGTTTCTTAACGGTCGTTTAGCAATCTTTTGTCCGTTTTGTCTCCTTATTTCGGTCGCGAAATGAAGATAAAATACGTGTTTGTTGATATATTAACTGTAAATGCCATTCACATATGAACACTAACGTACCacagttaaaataaaaagtcacggTCAAAGGACAAAAGAGAGGGCTACGTTTTTTGGAGAAGCTGGACCATTTTGACCTTATCATCTTCAGCGGTATAATTCAGCGAAATCAGTGATGTGCAGGGGTTTAAAAAGTACAGCTTGGGAAATATAAAGATGATGGTTATTTTAAAGAAGAAGCCTGACACATTGGAGACTTAACCATCTTCAAAGGACAATGCTACAATTCAAGGAAGTCGACAGTTGTCTCAATTATAcagttttgccttttttttgTACCATAGTCTAAGTTTGTATTTTGATTGCCTAGAAGGTATttcttattaaagaaaaaaaaaaaaaaaaaaaaaaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093646

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012695 False 954 processed_transcript 0.40 4 20227045 20231708
TCONS_00012696 True 607 processed_transcript 0.31 2 20230139 20231750

Neighbor

gene id symbol gene type direction distance location
XLOC_006562 AL954359.2 coding downstream 4911 20217490 ~ 20222134 (-)
XLOC_006561 fam204a coding downstream 427221 19766896 ~ 19799824 (-)
XLOC_006560 rab11fip2 coding downstream 584757 19610562 ~ 19642288 (-)
XLOC_006559 NA coding downstream 870034 19350851 ~ 19357011 (-)
XLOC_006558 NA coding downstream 887609 19338477 ~ 19339436 (-)
XLOC_006564 si:ch211-270n8.1 coding upstream 147642 20379392 ~ 20381485 (-)
XLOC_006565 gfra1a coding upstream 160906 20392656 ~ 20519001 (-)
XLOC_006566 si:ch1073-126c3.2 coding upstream 303409 20535159 ~ 20540790 (-)
XLOC_006567 CU633804.1 coding upstream 315217 20546967 ~ 20547498 (-)
XLOC_006568 NA coding upstream 498084 20729834 ~ 20731888 (-)
XLOC_006471 BX537274.2 misc downstream 9962140 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 19400820 825904 ~ 826225 (-)
XLOC_006557 NA non-coding downstream 949713 19276173 ~ 19277332 (-)
XLOC_006556 NA non-coding downstream 1210212 19010172 ~ 19016833 (-)
XLOC_006569 NA non-coding upstream 844902 21076652 ~ 21079411 (-)
XLOC_006570 NA non-coding upstream 914364 21146114 ~ 21147382 (-)
XLOC_006577 NA non-coding upstream 1693951 21925701 ~ 21939965 (-)

Expression


Co-expression Network