dnajc28 (dnajc28,LOC107748188,LOC107673653,LOC107597584,LOC107756751,LOC107656783,LOC107569146)


Basic Information

Item Value
gene id dnajc28
gene name dnajc28,LOC107748188,LOC107673653,LOC107597584,LOC107756751,LOC107656783,LOC107569146
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17649975 ~ 17652121 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248852.1
TTCCCAGCATTCTGTTCGACGTTAATATATAACAACAAACCCCAGTGAACGTTCAAAACGGTGTCattcaaaacacaaagacatGCTGACCTAACTCACTCTGCAGTGGAAATATCCGAGCTGTATCAGTGAGGTTCCAGTTTCATATAGGCACAATGAGCTGCTGGATGTTGTTACAGTTGCACGGCGGGGACCTTCGCAGATCTCTTCTGCCTCTGTGCTGTTCCTTCAGTCTACGAGCTCTCAGCTCCAGGGCTATCAGCCGCAGCTTGAGAGAGAGTTACCGTATTCTGCAGCTGCCTGATGATGGAGCCAGCAACGCTGCAGAGGTCAAGGAGGCTTACCTACACATGGCCAAGCTCTACCATCCAGATTCAGGCGCACCCACAGCAGATGCAGCTCTATTCTCTCAGATAGAGGAGGCCTATCGGGCTATACTAGCCCACCTTGCCCGGCAGAAGTCAGCCTCACAGTATACCCAATCgatggaggaagaagaggaagataaaattaaaagtaatgcCCCTCAACACAGACATTACCTCAGTTTTGAAGGCATTGGTTTTGGCACTCCAAGCCAAAGAGAACGACAGTACCGACAGTTTCGTGTAGACCGCGCCACCGACCAGGTCCTGGAGTATCGCCAAAAGGAGATGGAGAAAGCAGCAGCAGATGAAGGAGCCATGGTGACCCGAGATGCACGTTTGCGCAGCAAGCAGATCAAAATCACTCAGGCGGTGGAGAGGCTTGTTGAGGACCTCATACAGGAGTCGATGGCTCGTGGAGACTTCCAAAACCTTAGTGGCACTGGCAAACCGCTCAACAAGTTTGATTACAACCCGTACATGGACCCCATGACGCACAACCTCAACAGAATCCTCATCGACAACGGTTACCAGCCTGAGTGGATCGTGGCTCATAAGGAGATCAGGGAAACCATTGCTAAAATGAGGGCAAGGTTGCAGGAGATCAGGGCCAGGCTGGGAGAACCCATGAGACACTCAGAATCCCTCCAGTGGAAGGAGCACTGCGCTGTGTTTGCTGACGAACTGGGGAAACTCAACAAGAAAGTGGACAGTTTCAACCTGATTGTGCCTCTCTTGAGCAGACAGATGGTGCATTACAGCCTGAAGAGAGAGCTGGAGAAAATACTGAAAACTGATCAGCTGCTCAGGcaggagaaggagagagagaaagaaaggaagcaAAAGGAGCAGATGGAGACAGCGAGAACATCTCAGAACACCAGACAAGGACTCATCACATGGATGCAGAATCTTCTTAAATGAGGCGGCTTTAAAATGCAGAGTTGTATTTCGCCTGTTTGCCTATTATTAGTGCAATTTAAGATTATGTTGGccttgcttgttttttattatatctgtaATACACTATGAAacaattatttagttttatttaaaactaccAACAAATTATAGGCAATGATAAATAAACCAATCATGTTGatgta

Function

symbol description
dnajc28 Predicted to be involved in Golgi organization; Golgi vesicle prefusion complex stabilization; and retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Predicted to be part of Golgi transport complex. Orthologous to human DNAJC28 (DnaJ heat shock protein family (Hsp40) member C28).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K19373 DNAJC28; DnaJ homolog subfamily C member 28

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248852.1 True 1471 mRNA 0.47 2 17649975 17652121

Neighbor

gene id symbol gene type direction distance location
zp2l1 NA coding downstream 75601 17559528 ~ 17574374 (-)
appb appb,LOC107597486,LOC107748127,LOC107595805,LOC107756757,LOC107695460,LOC108426075 coding downstream 334157 17299245 ~ 17315818 (-)
si:ch211-160b11.4 NA coding downstream 451584 17196411 ~ 17198391 (-)
mettl21cb zgc:172067,LOC107673723,LOC107748129,LOC107597488 coding downstream 457833 17188746 ~ 17192142 (-)
dcun1d2a dcun1d2a,LOC107597495,LOC107673709,LOC108426072,LOC103045446,LOC107756765 coding downstream 474261 17170549 ~ 17175714 (-)
ralba ralba,ralb,LOC107746258,LOC107597482,LOC107596059 coding upstream 376233 18028354 ~ 18038668 (-)
hspbap1 LOC107722869,LOC107661136,LOC107660643 coding upstream 545005 18197126 ~ 18205461 (-)
adcy5 adcy5,LOC107555914,LOC107661140,LOC107660638,LOC107596066,LOC107714401 coding upstream 774951 18427072 ~ 18492873 (-)
hacd2 hacd2,LOC107660639,LOC107741899,LOC107661144 coding upstream 841965 18494086 ~ 18499894 (-)
si:dkey-219c10.4 LOC107741933,LOC108266238,LOC106586425,LOC102795313,LOC101468032,LOC107673728,LOC107660664,LOC107555910 coding upstream 882531 18534652 ~ 18545151 (-)
G71175 NA non-coding downstream 4055 17644438 ~ 17645920 (-)
G71187 NA non-coding downstream 6299 17643356 ~ 17643676 (-)
G71186 NA non-coding downstream 7537 17642203 ~ 17642438 (-)
G71185 NA non-coding downstream 8688 17641054 ~ 17641287 (-)
G71184 NA non-coding downstream 9572 17640179 ~ 17640403 (-)
G71190 NA non-coding upstream 9095 17661216 ~ 17661445 (-)
G71194 NA non-coding upstream 13398 17665519 ~ 17692820 (-)
LOC122352098 NA non-coding upstream 81082 17733203 ~ 17735919 (-)
G71293 NA non-coding upstream 570193 18222314 ~ 18226787 (-)
G71339 NA non-coding upstream 856319 18508440 ~ 18510009 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other downstream 128415 17364187 ~ 17521560 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other downstream 394484 17235872 ~ 17255491 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other downstream 760428 16886753 ~ 16889547 (-)
G70986 pou2f1b,LOC107748141 other downstream 826200 16817140 ~ 16823775 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other downstream 903753 16720804 ~ 16746222 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other upstream 599115 18251236 ~ 18366267 (-)
LOC122352185 NA other upstream 917634 18569755 ~ 18569882 (-)
ankar ankar,LOC107728908,LOC107660654 other upstream 2067821 19719942 ~ 19731794 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other upstream 2144131 19796252 ~ 19829475 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other upstream 2181799 19833920 ~ 19852625 (-)

Expression


Co-expression Network