asb18 (asb18,LOC107723656,LOC107686685,LOC107567774)


Basic Information

Item Value
gene id asb18
gene name asb18,LOC107723656,LOC107686685,LOC107567774
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13363066 ~ 13370927 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248865.1
TTTCACTTCTCACTGGAATTACAGTCGACAGTTCAGGGCACTTTTGGAATTAAGGTCACAATGTAAAGCACCATTGAGGATCAGATTCCTGGTCAGCTGTGATTGGAGGACAATGCCATCGCACCTCATGATTTGTTGAAATGGACAGTCTGATTCTATTCTTGGCTTGTGCAGTAGTGATATCATCAGCAATGCTTTCCATTCAGCTGTGCATCTGGCATATTTATTGAACTGACCTCTCTGAACACTCAGCCTCTGTGTTGTTGATGAAAACAATGATCAAGGCCCCCTTGTCATGCAATTACCCTGCTGATCACATGTCATTTGTACTAAAAATACAAGATATAGAGCAACACTGATGATATAAATAGCCATAAAATCAGACAGGTAAGAAGTAGAAAGGTCAATATTAGCCATGCTCTCCCAAGGCAGTGGGGCGTGTGTTGTCAGTCGAAAGGCTACATTCTTGACAGAGAGAAGGCGGTCGTCTTTAGACAGCAGCCAGGGTGtcaggaaagaaaagaacaagGGTTATAAACAGCCAGGGATGGACTTCCTTTGTCCCCCTGTTCTCAGTGACCTTCTAACCCACCACTGGAGAGACATGCAGGATGGATTCTCTGATCCAGAGCAACTGAACGAAGTTCTTGAATTTCAGAGCGACGAACTGCTGTGGACTGCTCAGAAACGGGGTCTTTGGTCTTTGGAGTATAAAAGAGAACTGACAAGCCCACTGTGTATTGCTGCTGCACAAGGTTTCTCTGAATGTCTGCTATATTTACTGGAACATGGAGCACACCCCAACCTTATCGCAGGAGGAAAAGCAGCACTTCACGAGGCCTGTGCAAACGCCAGCCTCGAATGTGTAGAGCTGCTGCTGGAACACGGAGCTAATCCTAACCAGATGACAGACGAGGGACTGACTGCCTTACATCTCTGCAGAACACCACAATCACTACAATGTGCAAAAGCCTTGGTGAGATATGGTGCCAAAGTGAACTCTCCCAGTGAAGAAGAGGATGAAACACCTCTGCATGTGGCAGCTAGACATGGCCTGCCTCATCATGCACAGCTGTACCTACGATTCGGAGCCTGTGTGAACCATAGCAACTCTTCAGGTGAAACGCCACTGGGGGTGGTTTGTGGAGTCATCCCAGAAAAGATAGATGAAAGTCAAGATGAACGATACCTGGAGATCTGTCGTCTCCTTCTGGCCTACGGAGCTAAGATTAATTCATCTGATAAAGAACGGCGAAGTCCTCTACACAAGGCAGCCCGCAACGTTCAGCTTAAGCTGGTGGAGCTTCTCCTGGACCATGGGGCTGATATCAATGCCATTGACTATAACGGATGTTCGCCATTATCGAGTGTTCTACAAAGCTCTGTGGTTCGGCAAGATTGGGAACCTCACAGGGTTGTTCAGACCTTGTTAAATCGGGGCTCTATTAAAGTCTGGCCACAAGCATTGCTGAAGgTATTAACAGCCTGCGCAGAAGCACCTAAAACGGTGGAAATCCTGTTTAACTCATACACACTTGTTCCTGTGACCTCCAAATGGGTGGAGGCTATACCTGAAGATATTTTTCATcttcacAGAACATTTTACGAGTCTCTCTTTGCACTGGAGTATAAACCACGTAGTTTACAGCATCTGTGTCGGTCTGCACTGAGGAAACAGTTTGGAAAAAACTGCTGCTCATTCATTCCCAGGCTCCCCGTACCCAAACCTCTTGAACAGTATCTTCTTTTGGAACCGGAGGGGTACATTGACTAGAAACCTTTAGGATACTGTATAAGGGTTTTTAGCACAAAGAAATGTAACACTCTGACGAAGATGTCACCATacagttatattatttttttccacctgTTTTCATATAAATAACCTAATATATTAGTGTAAATAGATTTACaagatattttattgtttgtgttgCAGTTGCAGCTCAATTAACGTTCATTGCATATTATTTCATTAAGAAATGATTTTGtcagtcattaaaataatatctttttaaaataa
>XM_043248866.1
TTAAAACCTGTTCGAGCGTTCTGTTAAAGCAGTACGGGGCAGATTAGAGGCTTACAGCAGATCTACTCTTCTCAGAACAGCATAATATTGTTGACTTGATTGAGTGTTCTGGTGCTGCTGGCCAGCTGCTCGCCAGGTTTATGTGTAGTGAGAAGAGCATGTCTACAGATCCTCTCTCACTGTCTATAATCCACCTCTTATAGCACTGTATTTAGAAACATCACCTAAATCAGATCCTACTCGTACAACTATGCTTACACATGGAGTTTGTCAATTTAAGACTTTCTGAAGACGCACAAAACTAGATTTGACAGTGGGTTTGCAGTGTAAATGCTCACACCAGTCTTATAAACATTTAGATCGACTTACAGTTGGACCTGTCTATATTTAGATGTAACCACAGAGAACAACAACAGATGCGCCACATATGAAACTTATTACAGTCTCAGCTTAGTGTGAAAGGGGAAAAACCTACTGACAGTGTTATCAAACAATGTCAGACGACATTGTATTAGATTACCCTGTCGAATCAGAATTCGTTAAGGCGCTTAAAGAAGCGCAATGTAAAGAGGACTCTACGTATGTGCAGACCCTTCTCACTGAGGCAAGCAAAGAAAATCCAAATATCATCATAGAGCTGTCAAATGATGACTGGATGAAAGACCCTGATGTCGAGCTCCCCCCAGCTGTACTTTTGGGTCTTTGGTCTTTGGAGTATAAAAGAGAACTGACAAGCCCACTGTGTATTGCTGCTGCACAAGGTTTCTCTGAATGTCTGCTATATTTACTGGAACATGGAGCACACCCCAACCTTATCGCAGGAGGAAAAGCAGCACTTCACGAGGCCTGTGCAAACGCCAGCCTCGAATGTGTAGAGCTGCTGCTGGAACACGGAGCTAATCCTAACCAGATGACAGACGAGGGACTGACTGCCTTACATCTCTGCAGAACACCACAATCACTACAATGTGCAAAAGCCTTGGTGAGATATGGTGCCAAAGTGAACTCTCCCAGTGAAGAAGAGGATGAAACACCTCTGCATGTGGCAGCTAGACATGGCCTGCCTCATCATGCACAGCTGTACCTACGATTCGGAGCCTGTGTGAACCATAGCAACTCTTCAGGTGAAACGCCACTGGGGGTGGTTTGTGGAGTCATCCCAGAAAAGATAGATGAAAGTCAAGATGAACGATACCTGGAGATCTGTCGTCTCCTTCTGGCCTACGGAGCTAAGATTAATTCATCTGATAAAGAACGGCGAAGTCCTCTACACAAGGCAGCCCGCAACGTTCAGCTTAAGCTGGTGGAGCTTCTCCTGGACCATGGGGCTGATATCAATGCCATTGACTATAACGGATGTTCGCCATTATCGAGTGTTCTACAAAGCTCTGTGGTTCGGCAAGATTGGGAACCTCACAGGGTTGTTCAGACCTTGTTAAATCGGGGCTCTATTAAAGTCTGGCCACAAGCATTGCTGAAGgTATTAACAGCCTGCGCAGAAGCACCTAAAACGGTGGAAATCCTGTTTAACTCATACACACTTGTTCCTGTGACCTCCAAATGGGTGGAGGCTATACCTGAAGATATTTTTCATcttcacAGAACATTTTACGAGTCTCTCTTTGCACTGGAGTATAAACCACGTAGTTTACAGCATCTGTGTCGGTCTGCACTGAGGAAACAGTTTGGAAAAAACTGCTGCTCATTCATTCCCAGGCTCCCCGTACCCAAACCTCTTGAACAGTATCTTCTTTTGGAACCGGAGGGGTACATTGACTAGAAACCTTTAGGATACTGTATAAGGGTTTTTAGCACAAAGAAATGTAACACTCTGACGAAGATGTCACCATacagttatattatttttttccacctgTTTTCATATAAATAACCTAATATATTAGTGTAAATAGATTTACaagatattttattgtttgtgttgCAGTTGCAGCTCAATTAACGTTCATTGCATATTATTTCATTAAGAAATGATTTTGtcagtcattaaaataatatctttttaaaataa
>XM_043248867.1
TCAAGGAGAAGCTGATGCCCTTTCACTTCTCACTGGAATTACAGTCGACAGTTCAGGGCACTTTTGGAATTAAGGTCACAATGTAAAGCACCATTGAGGATCAGATTCCTGGTCAGCTGTGATTGGAGGACAATGCCATCGCACCTCATGATTTGTTGAAATGGACAGTCTGATTCTATTCTTGGCTTGTGCAGTAGTGATATCATCAGCAATGCTTTCCATTCAGCTGTGCATCTGGCATATTTATTGAACTGACCTCTCTGAACACTCAGCCTCTGTGTTGTTGATGAAAACAATGATCAAGGCCCCCTTGTCATGCAATTACCCTGCTGATCACATGTCATTTGTACTAAAAATACAAGATATAGAGCAACACTGATGATATAAATAGCCATAAAATCAGACAGGTAAGAAGTAGAAAGGTCAATATTAGCCATGCTCTCCCAAGGCAGTGGGGCGTGTGTTGTCAGTCGAAAGGCTACATTCTTGACAGAGAGAAGGCGGTCGTCTTTAGACAGCAGCCAGGGTGtcaggaaagaaaagaacaagGGTTATAAACAGCCAGGGATGGACTTCCTTTGTCCCCCTGTTCTCAGTGACCTTCTAACCCACCACTGGAGAGACATGCAGGATGGATTCTCTGATCCAGAGCAACTGAACGAAGTTCTTGAATTTCAGAGCGACGAACTGCTGTGGACTGCTCAGAAACGGGGTCTTTGGTCTTTGGAGTATAAAAGAGAACTGACAAGCCCACTGTGTATTGCTGCTGCACAAGGTTTCTCTGAATGTCTGCTATATTTACTGGAACATGGAGCACACCCCAACCTTATCGCAGGAGGAAAAGCAGCACTTCACGAGGCCTGTGCAAACGCCAGCCTCGAATGTGTAGAGCTGCTGCTGGAACACGGAGCTAATCCTAACCAGATGACAGACGAGGGACTGACTGCCTTACATCTCTGCAGAACACCACAATCACTACAATGTGCAAAAGCCTTGGTGAGATATGGTGCCAAAGTGAACTCTCCCAGTGAAGAAGAGGATGAAACACCTCTGCATGTGGCAGCTAGACATGGCCTGCCTCATCATGCACAGCTGTACCTACGATTCGGAGCCTGTGTGAACCATAGCAACTCTTCAGGTGAAACGCCACTGGGGGTGGTTTGTGGAGTCATCCCAGAAAAGATAGATGAAAGTCAAGATGAACGATACCTGGAGATCTGTCGTCTCCTTCTGGCCTACGGAGCTAAGATTAATTCATCTGATAAAGAACGGCGAAGTCCTCTACACAAGGCAGCCCGCAACGTTCAGCTTAAGCTGGTGGAGCTTCTCCTGGACCATGGGGCTGATATCAATGCCATTGACTATAACGGATGTTCGCCATTATCGAGTGTTCTACAAAGCTCTGTGGTTCGGCAAGATTGGGAACCTCACAGGGTTGTTCAGACCTTGTTAAATCGGGGCTCTATTAAAGTCTGGCCACAAGCATTGCTGAAGgTATTAACAGCCTGCGCAGAAGCACCTAAAACGGTGGAAATCCTGTTTAACTCATACACACTTGTTCCTGTGACCTCCAAATGGGTGGAGGCTATACCTGAAGATATTTTTCATAACATTTTACGAGTCTCTCTTTGCACTGGAGTATAAACCACGTAGTTTACAGCATCTGTGTCGGTCTGCACTGAGGAAACAGTTTGGAAAAAACTGCTGCTCATTCATTCCCAGGCTCCCCGTACCCAAACCTCTTGAACAGTATCTTCTTTTGGAACCGGAGGGGTACATTGACTAGAA
>XM_043248868.1
GACTCTACGTATGTGCAGACCCTTCTCACTGAGGCAAGCAAAGAAAATCCAAATATCATCATAGAGCTGTCAAATGATGACTGGATGAAAGACCCTGATGTCGAGCTCCCCCCAGCTGTACTTTTGGTGACCTTCTAACCCACCACTGGAGAGACATGCAGGATGGATTCTCTGATCCAGAGCAACTGAACGAAGTTCTTGAATTTCAGAGCGACGAACTGCTGTGGACTGCTCAGAAACGGGGTCTTTGGTCTTTGGAGTATAAAAGAGAACTGACAAGCCCACTGTGTATTGCTGCTGCACAAGGTTTCTCTGAATGTCTGCTATATTTACTGGAACATGGAGCACACCCCAACCTTATCGCAGGAGGAAAAGCAGCACTTCACGAGGCCTGTGCAAACGCCAGCCTCGAATGTGTAGAGCTGCTGCTGGAACACGGAGCTAATCCTAACCAGATGACAGACGAGGGACTGACTGCCTTACATCTCTGCAGAACACCACAATCACTACAATGTGCAAAAGCCTTGGTGAGATATGGTGCCAAAGTGAACTCTCCCAGTGAAGAAGAGGATGAAACACCTCTGCATGTGGCAGCTAGACATGGCCTGCCTCATCATGCACAGCTGTACCTACGATTCGGAGCCTGTGTGAACCATAGCAACTCTTCAGGTGAAACGCCACTGGGGGTGGTTTGTGGAGTCATCCCAGAAAAGATAGATGAAAGTCAAGATGAACGATACCTGGAGATCTGTCGTCTCCTTCTGGCCTACGGAGCTAAGATTAATTCATCTGATAAAGAACGGCGAAGTCCTCTACACAAGGCAGCCCGCAACGTTCAGCTTAAGCTGGTGGAGCTTCTCCTGGACCATGGGGCTGATATCAATGCCATTGACTATAACGGATGTTCGCCATTATCGAGTGTTCTACAAAGCTCTGTGGTTCGGCAAGATTGGGAACCTCACAGGGTTGTTCAGACCTTGTTAAATCGGGGCTCTATTAAAGTCTGGCCACAAGCATTGCTGAAGgTATTAACAGCCTGCGCAGAAGCACCTAAAACGGTGGAAATCCTGTTTAACTCATACACACTTGTTCCTGTGACCTCCAAATGGGTGGAGGCTATACCTGAAGATATTTTTCATcttcacAGAACATTTTACGAGTCTCTCTTTGCACTGGAGTATAAACCACGTAGTTTACAGCATCTGTGTCGGTCTGCACTGAGGAAACAGTTTGGAAAAAACTGCTGCTCATTCATTCCCAGGCTCCCCGTACCCAAACCTCTTGAACAGTATCTTCTTTTGGAACCGGAGGGGTACATTGACTAGAAACCTTTAGGATACTGTATAAGGGTTTTTAGCACAAAGAAATGTAACACTCTGACGAAGATGTCACCATacagttatattatttttttccacctgTTTTCATATAAATAACCTAATATATTAGTGTAAATAGATTTACaagatattttattgtttgtgttgCAGTTGCAGCTCAATTAACGTTCATTGCATATTATTTCATTAAGAAATGATTTTGtcagtcattaaaataatatctttttaaaataa

Function

symbol description
asb18 Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within intracellular signal transduction. Orthologous to human ASB18 (ankyrin repeat and SOCS box containing 18).

NR:

description
PREDICTED: ankyrin repeat and SOCS box protein 18-like isoform X1

GO: NA

KEGG:

id description
K10340 ASB18; ankyrin repeat and SOCS box protein 18

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248865.1 False 2023 mRNA 0.44 5 13364282 13370927
XM_043248866.1 True 2029 mRNA 0.43 5 13363066 13370927
XM_043248867.1 False 1788 mRNA 0.47 5 13364262 13370680
XM_043248868.1 False 1574 mRNA 0.44 6 13363637 13370927

Neighbor

gene id symbol gene type direction distance location
LOC122351698 col6a3,LOC107685998,LOC107723650,LOC107695585,LOC107725234 coding upstream 14493 13260261 ~ 13348573 (+)
LOC122351699 LOC107567775,LOC107739950,LOC107670696 coding upstream 84470 13275992 ~ 13278596 (+)
rpe rpe,LOC107695573,LOC107725216,LOC106919839 coding upstream 127797 13232306 ~ 13235269 (+)
ackr3a ackr3a,LOC107670701,LOC107555037,LOC107725223,LOC107695574,LOC107571721 coding upstream 137930 13219623 ~ 13225136 (+)
LOC122351306 LOC107695589,LOC107555072,LOC107725238,LOC107601065,LOC107571720,LOC107739951,LOC107670699,LOC107555073 coding upstream 149525 13211745 ~ 13213541 (+)
LOC122352182 LOC107685564,LOC107723675,LOC107725243,LOC107695580 coding downstream 666 13371593 ~ 13386493 (+)
serpine3 serpine3,LOC107555035,LOC107567776,LOC107725220,LOC107695567 coding downstream 15733 13386660 ~ 13400112 (+)
wdfy2 wdfy2,LOC107725248,LOC107685482,LOC107723695,LOC107695578 coding downstream 40860 13411787 ~ 13419851 (+)
trnal-caa NA coding downstream 52787 13423714 ~ 13423826 (+)
esyt3 esyt3,LOC107685117,LOC107723684,LOC107695576,LOC107555067,LOC107725232 coding downstream 54263 13425190 ~ 13433984 (+)
G69796 stk17b non-coding upstream 229227 13130098 ~ 13133839 (+)
G69789 NA non-coding upstream 255234 13107595 ~ 13107832 (+)
G69783 NA non-coding upstream 256309 13106280 ~ 13106757 (+)
G69723 NA non-coding upstream 522915 12837719 ~ 12840151 (+)
G69718 NA non-coding upstream 589216 12773334 ~ 12773850 (+)
G69985 NA non-coding downstream 144762 13515689 ~ 13518237 (+)
G70021 NA non-coding downstream 298179 13669106 ~ 13669444 (+)
G70029 map3k19,LOC107684057,LOC107723646,LOC107555330,LOC107725236,LOC107658294 non-coding downstream 314869 13685796 ~ 13686466 (+)
LOC122351436 LOC107555330 non-coding downstream 315738 13686665 ~ 13689033 (+)
G70032 NA non-coding downstream 321287 13692214 ~ 13692487 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other upstream 58475 13289693 ~ 13304591 (+)
G69755 NA other upstream 377088 12984868 ~ 12985978 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other upstream 559658 12732298 ~ 12803408 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other upstream 733531 12627535 ~ 12629535 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other upstream 910701 12434988 ~ 12452365 (+)
ccnt2a ccnt2a,LOC107658298,LOC107725237,LOC107723659,LOC107684218,LOC107555058,LOC107555362 other downstream 305236 13676163 ~ 13684835 (+)
LOC122351767 NA other downstream 1216155 14587082 ~ 14589439 (+)
si:ch211-168k14.2 si:ch211-168k14.2,LOC107681321,LOC107748618,LOC108441415,LOC105905900,LOC108266656,LOC107600399 other downstream 2030200 15401127 ~ 15425361 (+)
LOC122351678 hspe1,mob4,LOC107690609,LOC107595852,LOC107569672,LOC107731766,LOC106586370,LOC105016277,LOC100701317,LOC103156730,LOC101472107,LOC102310674,LOC102783361,LOC108238849,LOC107690608,LOC106582314,LOC105899369 other downstream 2337274 15708201 ~ 15715901 (+)
plcl1 LOC107569711,LOC107731752,LOC107690606,LOC107719808,LOC107659890,LOC107595846 other downstream 2363643 15734570 ~ 15789702 (+)

Expression


Co-expression Network