LOC122351723 (ttn,ttnb,LOC107698997,LOC107714355,LOC107601612,LOC107716993,LOC107657493)


Basic Information

Item Value
gene id LOC122351723
gene name ttn,ttnb,LOC107698997,LOC107714355,LOC107601612,LOC107716993,LOC107657493
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 20411395 ~ 20417109 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249002.1
ATGGAGGCTTACTACAGAATCAGGAGACGCTCTCTTGGTGATCTTTCTGATGAGGAACTGCTTCTGCCTGTTAGAGAGTACTTGTCAATGAAGAGAACAGAGGAAGAAAGACTTAAACTAGAGGATGAACTTGAATTAGGCTATTCTGCTTCTCCACCAAGTCTTAGCCCTGTACGCTTTGAACTCTCTGCACTGCGTCACCCGTCACCTAAGAAAGCTGCATATGATGAGGAGCAAGGGGAAGAAGTTCCATCCTATGACTCCTATCGCATTCCATCTAAATATGAGGCTGGTCCAAGCTATATTGACTTACGCCAGCGTCACGATAGGGCAACATACAGACCTCCAAGACAAAAGCAAAGATTATATGAGGAAAAAGAGGATCAAGAACTGCTTAGGTCAGTAACAACAACCACAAAGTTAACGTCCTACAAGAGCAAACTGCAGCACATTGAGTTTGAGGAGAAAACAAAGGTCAAAAGAAAGGAGAAAACAAGGGTGTCTATGTCAGCAGTAACTGAGGCTGCAGTCATAACTGATATGCCTACAACATTTGTTCCTGGCTATGCTACAGCAACTCGTCCTAAGAAACCTTCTGCATCTCTGGCAGAAAAAGAAGTGGTTAGAACACCTTCACCTGAAAAGACACGCCCACGTTCCCCCAGCTTTGAGAAAGCAGACACTACACCAGACTTATCAACAAAAATTGATTATATGTCAAGGTATGAGTCAAGAAAGAAGGCCttgaaaactgaaagaaagtTCGAAATTGTGACCCAGGAGCCTTTTACCCTTGACCATGCTCCAAGAGTGACTGTAAGAATGCGCTCTCACCGTGTGCCAATTGGTCAGAACACTAAATTCACACTGAATGTCCAATCTAAGCCAGAAGCACAGATTAAATGGTACCACAATGGAGTTCAAATTGAAGAAAGCAGAAAATACCGTATGTTTAACATGAGTGGCGTTTTGTCTCTTCAAATCATTGATTGTCAGGAAGAGGACAGTGGCACCTACCGTGTCGTCTGCACAAATGCAAAGGGAGAGGCCTCTGACTATGCCACTCTCGATGTTGCTGGAGCCACCAACTCCTTTGTCCCTGAGATGACAAAAACAGATGTTTATCATGTTTCATCTACAAAAGCAGCATCTGTATCAGAAACACAAGTGGAAGTATCCGAAACTAAAACAGACAAGATAGAAGAGACAATTAAGACTGTTGTTCAGGAGAAGCAAGTAACATCTGAAATCAAACTTGAAACTATGGAAGTGACAGCAGTTGAGGATGTTGTGGTAGAAAAAATTTCTGAGACTAAACTTGAATCTACAGAAGTGAAAACATTCGTGGAAGAAGTGGTTGAGGAAAAGAAGTCAACTCTCCCAGCCACAATTTTGACTAAACCACAATCACTAACAGTGTCTGAGGGAGAATCAGTTAAATTCACATGTGACGTTGATGGTGACCCTGCACCCACTATAACATGGATGCGAGAGGCACAAGTAATTGAGTCATCTCATCGTCACCATATTACCTCAACTGAATTTAAATCAACTTTTGAGATTACCCAAGTTGAAATGTCAGATGGAGGTAATTACACTGTAGTGGTACAGAACTCTGAAGGTAAACAGGAGGCACAGTTCAGCCTAACTGTTCGTAAACCAACACCTGTACAGAAAGTTGTTGCTTCTCCTCCTAGAGTGAAATCTCCAGAGTCTCCCCGTATAAAGTCACCATTTGGAATTAGGTCTCCACAGAGAATTAAATCACCTGAACCAATTAAATCTCCACAAAGAGTTAAGTCCCCACCCATGGTAAAATCACCTACtcctaaagaaaaaacatccaAGCCAACCTTTTCAACTGAACTCAAAGACATCTCAGCATCTGCAGATACTATTATAAAGCTTACAGTGAAAATGTGCGGTGAGCCTAAGCCATCAATCTCTTGGATGAAAGATGGAAAAAACCTCTCTCAAGGTGGAAAATATGAAATCTTTGAAGAACATGGTTCAGCACATCTTGAAATCTATGAAGCTGATGTCTCTGATAGTGGAGTATACACATGTACAGCCAGAAACAGTGCTGGATTTGTTACTACAAACTGCACAGTTACTGTTCAAGCACGGACAACAACAGTTGCAGTGGAAAGAAAAGCAGAGTTGACAGAGCAAATAGTGAAAAAGGAGATTGCCTATGAGGAAGTACAGTCCTTTACAGAAATGAAAGCATCAAAAACCCAAATGACGATGAGTCAAGGTCAGACTATTACACTACGAGCCAGCATACCTGAAGCCTCCGATGTCAAATGGATCCTAAATGGAGTCGAGTTATCGAATTCTGAGAACTACAGATACGGTGTGTCAGGAAATGATCACACCCTGACAATTAAAAGCATCAGCCATCATGACCAGGGAATTCTCACATGTGAGGCCAAAACTGAACATGGTGTAGTCAAATGCCAGTTTGACACGACCGTCAGTGCTATGCGCTCAAATGCACCAAGTTTCCATGTGCAACCACATTCCCAGAATGTAAACGAGGgacaaaatgtcacatttacatGTGAAATCACTGGTGAACCTTCTCCTGAAATTGAGTGGCTCAAGGATAATTCAACAATATCTATTACATCGAACATGAAATTGAGCCGGTCTAAGAATGAGTACACACTTGAGATTCACAACGCTACCATTGAAGACAGTGGAAAATACACAGTAAAAGCAAAGAACAAATTTGGACAGTGCTCTGCAACAGCATCACTGAATGTCCTCACTCTGGTTGAGGAACCTGCCAAAATGATAATTGTGGAGAAGGCCTCTGATGTTGCGAGCATGCAGGGCAGTTATTCTGCCAAGCATGTGGTTTCAAAATTGCAAGAGACATCCTTCAGCGGTTCCAGCATGGCTGAAGTTAAATTTGAGAGCATGTCAGCGTCTAGCATGACCTCCATGACTTCTGAAAGAATGATAGCTATGAGCTCCAGCAGTATGATGGCAATGTCCAGTCACTCGCATGTTGAGGGGTCATCCATCAAAGCCATTTCTCATGGCCGCAAAGGTATACCACCAAAGATTGAGGCTGCTCCTCAAGATATCAGTATTGAGTCAGGAAAGGTCCTGACTGTAGCCTGTGCTTTCACTGGAGACCCAACCCCTTGCACAGAATGGTCACATTCAGGGAAGACACTGCCCAGCAAGGAGGAGAGTGGACGATTGCAGATTGAGACTTCTCAAGATGTCACCACTCTTGTTATCAGTGGAGTGAAAGAGACTGATGCTGGTGCATACACCTTAAAGCTTTTTAACGAGTTTGGTTTTGATACCACTACTGTCAATGTCAGGATTcgatcaatgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattatataatagcaATACAATCATCACCCCATTTCCCTCATTcaaatcctttttatttatagaatgagaaaaaaatactgttcttGATAAAGACCTGAATTTCTGTTCTTGTAAATatgaactttttctttttttaaccaaactTGACATTCATTTATGCCAAACTAGACTAAAGTCTAAAGTTGTTATAAAATGTGCCATATTGGATAATTATGATCAGAAGTTCAGCACCATTTTGTGACATGTACATAATGTATATAGCCGAATTTACCGGTTATGGAAAATGTATGAATTGTTATTTAtgacaatattaacaaatgaaacaaaaggaACTAAATGTTTAACAGGAGAAAGTTTCACATGGAACGAATACCCTGTTAAACCTGAAACGAAACGAAACTATGTGCCTCAACAAAAAGTTGAAGTCTTAAGATTGCCTCAACAGGTAGAGAGGCTCCCTGTTGAAGTTAACTAAAATCAGAGAGACAAAGATATGCACTGCACATTTGTGCGTGCAGTAAAGCAGTATACAAGAATTTATGATTTGAACATAAGACCTTGAGTGCTGTTTGCATTACCCTCATGTAAGCAGGATGACTAGGCCTTGTGTTCAGACTGATTAAGTCATACCACCATTTTAATGACAAGCTCAATGTGCGAGCGGCCTGCacaatgagtaaatgatgatgttAGTGCACAGTTTCTGGCAATGGACTGTTTGAATTTTGATTTTATGAAAGTAACATCACCTGGCCATTCATTGTAAAATCAATTCAAGTGCTTCTTTGCAGAAGCTGTGCCAACTCTTGGAGGATTGCTAagttatattttgtgtgtttgtgtgtgtgctagcATTAGAATCTCACTTTGTCAGCAGCCAGGGTATCCATCATGTAACCACAGAGACTTCATGTGCtgtgcaaagaaaagaaaaatacatggaTGTAATACCCTGCACATTGATTTATTAGAACTAATTTATGTAGGTTTACCCATATATTCAGCCTCCTTGAGTTTTATGAATTACTGATTTAATAAAGCATGTTTTCAGCACCATaaaa

Function

symbol description
ttn Enables several functions, including cytoskeletal protein binding activity; enzyme binding activity; and protein kinase activity. A structural constituent of muscle. Involved in several processes, including mitotic chromosome condensation; myofibril assembly; and protein kinase A signaling. Acts upstream of or within detection of muscle stretch. Located in condensed nuclear chromosome and sarcomere. Implicated in intrinsic cardiomyopathy (multiple) and myopathy (multiple). Biomarker of coronary artery disease and dilated cardiomyopathy.

NR:

description
PREDICTED: LOW QUALITY PROTEIN: titin-like

GO:

id name namespace
GO:0014866 skeletal myofibril assembly biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249002.1 True 4448 mRNA 0.40 7 20411395 20417109

Neighbor

gene id symbol gene type direction distance location
LOC122351553 fkbp7,LOC107562709,LOC107717008,LOC107657501,LOC107584168,LOC107714366,LOC107698996 coding downstream 7696 20401384 ~ 20403699 (-)
tfpia LOC107602164,LOC107728931,LOC107714394,LOC107660650,LOC107584163 coding downstream 116017 20271220 ~ 20295378 (-)
calcrla calcrla,LOC107728927,LOC107657513,LOC107602163,LOC107714396 coding downstream 140863 20248988 ~ 20270532 (-)
obsl1b obsl1b,obsl1,LOC107660652,LOC107602158,LOC107657519,LOC107728922,LOC107714352,LOC107584169,LOC108423904 coding downstream 381590 19997475 ~ 20029805 (-)
wdr75 wdr75,LOC107660592,LOC107714378,LOC107728907,LOC107657531,LOC107602136,LOC107565028 coding downstream 644602 19750542 ~ 19766793 (-)
LOC122351724 ttn,ttnb,LOC107657493,LOC107601612,LOC107716993,LOC107698997,LOC107714355 coding upstream 763 20417872 ~ 20421682 (-)
LOC122351551 ttn,ttnb,LOC107698997,LOC107601612,LOC107716993,LOC107657493,LOC107714355 coding upstream 4573 20421682 ~ 20423199 (-)
LOC122351725 LOC107714355,LOC107698997,LOC107601612,LOC107657493,LOC107716993 coding upstream 5804 20422913 ~ 20426727 (-)
LOC122351726 LOC107698997,LOC107716993,LOC107601612,LOC107657493,LOC107714355 coding upstream 9618 20426727 ~ 20428717 (-)
LOC122351552 LOC107698997,LOC107562717,LOC107716993,LOC107601612,LOC107657493,LOC107714355,LOC108435066 coding upstream 18636 20435745 ~ 20436901 (-)
G71924 NA non-coding downstream 21696 20378652 ~ 20389699 (-)
LOC122351563 NA non-coding downstream 108959 20296930 ~ 20302436 (-)
G71919 LOC107728915 non-coding downstream 193348 20215420 ~ 20218047 (-)
G71727 NA non-coding downstream 469848 19887175 ~ 19941547 (-)
G71732 NA non-coding downstream 488704 19916199 ~ 19922691 (-)
LOC122351562 NA non-coding upstream 17007 20434116 ~ 20434969 (-)
G71940 NA non-coding upstream 87159 20504268 ~ 20508702 (-)
LOC122351561 NA non-coding upstream 184875 20601984 ~ 20602557 (-)
LOC122351564 NA non-coding upstream 215584 20632693 ~ 20637422 (-)
G71957 ttnb,LOC108435066,LOC108266290 non-coding upstream 340509 20757618 ~ 20758206 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other downstream 518080 19881550 ~ 19893315 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other downstream 558770 19833920 ~ 19852625 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other downstream 581920 19796252 ~ 19829475 (-)
ankar ankar,LOC107728908,LOC107660654 other downstream 679601 19719942 ~ 19731794 (-)
LOC122352185 NA other downstream 1841513 18569755 ~ 18569882 (-)
G71938 nab1,LOC107565022 other upstream 72055 20489164 ~ 20503890 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other upstream 1292179 21709288 ~ 21726820 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other upstream 1754354 22171463 ~ 22223667 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other upstream 1879898 22297007 ~ 22511307 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other upstream 3513098 23930207 ~ 23931329 (-)

Expression


Co-expression Network