LOC122351760 (LOC107755372)


Basic Information

Item Value
gene id LOC122351760
gene name LOC107755372
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 22611358 ~ 22615781 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249030.1
ACTGCAGGATCCTGTATAAAAGAAGGAGATGACGTTTTTGCCACTTTTACAGCGTCTGCATGATGAAAATATGCACAATGAATGAATACCTGCattggcaaaaataaataaaattgtttccaGTCAAAATACCTTAAAATATCAGTACTGAAATATcaagatgcatttttaacataataacaTTTACTTCGTTTAGGTAGctagttttgtgtttaattttttcctgAACAGAacagacatttattttgaaggtATTTgcctaaataatataaactctATAAAATATTAACGTTGCTGTCTTCACACTGTGACTAGGTGGATGTAGGCCTGTATAGTGTTCCTTCATGGCGCTTCATTGGgtagcaaaacattttattatcatgCAGCCTTAAAAGTGCAAATCAGAGAAGGTCGTGCTGCATAGTCTACTATTGCAAATCTTCATCTGCCATTGGATGCCCCACCCAATTATGTAAATCTATTGTATGGACTACGGATGTcaggttttacaggttttacagCTTTCAAAGCATGGGTACATAAAGGAGCCTCTTTTAGGGCATAGTGCATTACCTCTTATCTCCTGTGCGAGCTTTTGTGCGATAGCTTTTTTCTCAcaactacatttttacattttcaggttttttatCTCTAAACATCTCAACAAAGCAGCAAGAATGAGCTGTTCTGGACATGAAGATGCTAAAGTTGTAATTGTAGGCTCGGGTTTCGCAGGGTTGGCCGCTGCAGCTACTTTGGTGAAGGCAGGATTTGAAAATGTCTTGGTTCTTGAGGCGAAGGAAAGAATTGGAGGTCGAGTGCACACCACTAAACCCTTCACCGAGAGCATCATTGAAGTTGGAGCGAACTGGATCCACGGACAGACAGGAAACCCCCTGTACAAGATTGCAAAAGAAGAGAATCTGCTATCAAAGGGAACCTCAGCATCCACTTCTGAAACCTCTGATgattactttttcaaagaaGATGGTAAGAAGGTACCCTCAAAGCTTGCAGATCAGGTGTGTTCGCAGTTCACCACGCTCACCGATAAAGCATATGATGATGAACTTGAGCCCAAGTACCAGAAACTAACTCTTGGTGCTTATTTGGATGATGCCTTTGGTCAATCTCCTCTAGGGGCGAAACAAGATGGCCAGCAAGTTTTTGAATGGTGCAAGAGGAACGAATGCACAGACGAGGCTTGCTCTAGTCTCTATGAGATGTCTGCATCTGAGATTAGCAATTACACTACTTTGGATGGAGACTTTTATACCACTTTGGGACCCGGTGGCTATCGCGCAATCTTAGATGTCCTCATGAGAGATCTGCGTTCAGGAACCATCCAGTGTAATTCACCTGTCAAGAGCATCCACTGGGATTTGGTCAAAAAAGGACATTGTGAAGACCAAAAGCATCCTGTTCAGGTTGTTTGTGAAAATGGAAAGAGCTTTGACGCAGACCATGTGATTGTCACCGTTTCTCTGGGGGTTCTCAAAGACAAAGCCTCAACCATGTTTGAACCATCCTTACCGCCAACAAAGCTGTCTGCGATTAAGAATCTCGGTTTTGGGATAGTAGATaaaattttcttgttttttgagAAGAAATTCTGGCCAGATGATTGTGCCGGGGTGCAGATGGTGTGGAAAGAGGGGCCAGAGAATAAAGACGTTTATAAGTCTCTGTCTAATGGAGATGCCTGGAAGAAGACGTGGTACAAGAAGATCACTGGTTTTGATGCAGAGGGCCGTCATCCCACGGCTCTGTGTGGCTGGATCACAGGTAGAGAAGCACTGTATATGGAGAATCTTCCGGATAGTGAAATCAAAGATACCTGTTTGAGGTTGCTCAGGTCTTTCACAGGCTGGTCAGTGCCAGAGGTCTCAAAGATGCTGATCTCCAGATGGGGTTCTGACTCTCACGTCCATGGATCCTACACATTTGTTCCTGATGGTGTTGATGGAGTAAAAGCACAGAAGGCATTAGCATCACCTCTTCCACCTAAAGATGAATCCCAAGGGAGGATGgATCTTCAGGTGTTGTTTGCTGGTGAAGCTACACATGACAGCTTCTACACTACGACCCACGGAGCGTATCTCTCAGGAGTCAGAGAAGCAAACCGACTCGTAAACTATTACACTGATTGAAGTCCcaaagaaaacaacatacaCCTTGGTTCTGAAGGATCAAAGATTCTTAAAGGCAGCCTGTGTATGTTTTCCTTCAAGCAAGCAACCATACATTGGTGTAgtgttttactttctttctcttaTATTCATTGATTcatgctttctttctttattcatttacaataaTTCGTCATTTAAtcatataatcatttataataatcattcaTATATCTACTTTATTGATTCTTTAATTGATTggtcattatattataattgtgtAGTCTTACATTGCAGTCTTACACTTAGTCTAACTATGTGTTTAAAGGGTGGTTGGTTTGAGATATAAAGAAATGGAGTTTATGGAAACTCAGGGTTTATGGGATGttgttttgatataaaaatacttgCCGGATTAGTGCTGGTCAGACGAAGTCTGAGCATTGAAACATATGCAACTAAGCCTATTCAATGAGCTCCTTTTCACTTCATCTCCTGCTTCTGATCTTCTCTGTCTTTTCCCACTGTCAACGTCTTGgctgatgacagaatattaataaacttttgGGTATCAGACAAGACTTCCTGTTTTGGGTAGGCTATTAAGACTGCTGACAGGTTGTTCTGTTACCAGACAGAACTGATATTTTCTTCCGAGGCTGGATCTTAATTGGCATGGAGGCATGATCTAACAGTTTCATAAAGataacattttatgaatgtataaaatTGCATGGACTGACCCTCACACAGGGTCATCGCCAAAAAATCCTATTTGGCATGGATATAGATGTTCCCCTagtggctttaagaaaagagctaGAGCAGTGAAAATGACCGTTTTCATTATCAGGGCCATCCTTAATTTCCATcaataattaagaatttccaATCAACGTAAAATGATACAAAACTGTCTGGTAGAGATGCGTGTCTAAATCGCCCTAATGCATGGTGAGAAAGAGAGTTTGAGTGGATAAAAACTCTATAAGGACCACAGCTGGAGAATTGCAGAAAACAATTGAGTCTCGGGGgcagaaaaccttaaaaataactGTCAAACAGCACCTATGTCATGACATAAA

Function

NR:

description
PREDICTED: spermine oxidase-like isoform X2

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249030.1 True 3214 mRNA 0.40 3 22611358 22615781

Neighbor

gene id symbol gene type direction distance location
dnajc10 dnajc10,LOC107755373,LOC107739439,LOC107699025,LOC107676092 coding downstream 1289 22597828 ~ 22610069 (-)
dusp19a dusp19a,dusp19,LOC107739447,LOC107699004,LOC107601374,LOC107601606,LOC107755360,LOC106586411 coding downstream 69648 22537975 ~ 22541710 (-)
LOC122351832 NA coding downstream 126649 22482226 ~ 22484709 (-)
LOC122352034 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC106582264 coding downstream 212705 22341408 ~ 22398653 (-)
neurod1 neurod1,LOC107601389,LOC107755376,LOC107676085,LOC107716998,LOC107601620 coding downstream 382859 22225558 ~ 22228499 (-)
LOC122351761 LOC107601373,LOC107755372,LOC107739445,LOC107601614,LOC107601364,LOC107739440 coding upstream 1083 22616864 ~ 22620788 (-)
vil1 vil1,LOC107699006,LOC107676071,LOC107755365,LOC107601613,LOC107739444 coding upstream 6277 22622058 ~ 22635997 (-)
itgb2 LOC107699026,LOC107739438,LOC107601382,LOC107676087,LOC107601617,LOC107755371 coding upstream 21114 22636895 ~ 22645747 (-)
agr1 agr1,LOC107718316,LOC107692342,LOC107601372,LOC107754004,LOC107695966,LOC107560612 coding upstream 286667 22902448 ~ 22906312 (-)
hdac4 hdac4,LOC107560613,LOC107601379,LOC107741589 coding upstream 390057 23005838 ~ 23244247 (-)
LOC122352087 NA non-coding downstream 23107 22585744 ~ 22588251 (-)
G72583 NA non-coding downstream 30586 22579803 ~ 22580772 (-)
G72535 NA non-coding downstream 152600 22311078 ~ 22458758 (-)
G72537 pde1a,LOC108443795,LOC107716994,LOC107699023 non-coding downstream 300880 22307182 ~ 22310478 (-)
G72502 ppp1r1c,LOC107699022,LOC107601387,LOC107716995,LOC107755374,LOC107676093 non-coding downstream 316290 22286774 ~ 22295068 (-)
G72605 NA non-coding upstream 36721 22652502 ~ 22653575 (-)
G72603 LOC107739437,LOC107699030,LOC107601381,LOC107676090,LOC107755369,LOC107755357 non-coding upstream 42536 22658317 ~ 22658828 (-)
G72608 NA non-coding upstream 51116 22666897 ~ 22667111 (-)
G72615 NA non-coding upstream 84948 22700729 ~ 22701019 (-)
G72646 NA non-coding upstream 212317 22828098 ~ 22891619 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other downstream 100051 22297007 ~ 22511307 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other downstream 387691 22171463 ~ 22223667 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other downstream 884538 21709288 ~ 21726820 (-)
G71938 nab1,LOC107565022 other downstream 2107468 20489164 ~ 20503890 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other downstream 2718043 19881550 ~ 19893315 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other upstream 1314426 23930207 ~ 23931329 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other upstream 1328204 23943985 ~ 23960325 (-)
G72978 LOC107722896,LOC107674757,LOC107558607,LOC107677899,LOC107755197,LOC107600691 other upstream 1604741 24220522 ~ 24280708 (-)
G73201 NA other upstream 2411804 25027585 ~ 25030965 (-)
G73301 NA other upstream 2732997 25348778 ~ 25349640 (-)

Expression


Co-expression Network