LOC122351761 (LOC107601373,LOC107755372,LOC107739445,LOC107601614,LOC107601364,LOC107739440)


Basic Information

Item Value
gene id LOC122351761
gene name LOC107601373,LOC107755372,LOC107739445,LOC107601614,LOC107601364,LOC107739440
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 22616864 ~ 22620788 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249031.1
aaaatcattatGCAGCCGTATAAGTGCAAACGAGAGAACGATATGCTGTGTTTCTGTTGCTCAGGAAAATATTTCTGACACGTCTGTGTATCTGACAAGTGTTGCATATAAGTCATTTTATCACCTTATTTGCGGTAGAAGTAACAGTTTGAGCGTCACCGTTACTAGGAACTGAACGACGTTTTCGCTTTCACTTTCATCCCCGATTGTAACGGGCCACTCCCGCCGGCCGGTCGCAGCAGAAAGTCGAACGCGCCTAATATCTAACTTAATCTGCCATTGGATGTACCATGACCGCcgtatataattatatagcCTGCTGCATGGATTACAAAGGTCAGGTTTTACAGGTTGCTTAAAGCACCAGCACGTCAAGGAGTCTGTTTTAGTACATAGTGCGCTGCTCGCTTATCACCTATGCAAGGTTTCGTGCGATaggttgctgtttttttcttacaactgcatttatacatttttagcttttctcTAAACAGTTCAACAAAGCAGCAATCATGAACTCTTGTTCTGGGCGAGAAAATGCCAAAGTTGTAATTGTAGGCTCGGGTTTCGCAGGGTTGGCCGCTGCGGCTACGTTGGTGAAGGCAGGATTCGTAAATGTCTTGGTTCTTGAGGCGAAGGAAAGAATTGGAGGTCGAGTGCACACCACTAAACCCTTCATCGAGAACATCATTGAAGTTGGAGCGAATTGGATCCATGGCAGGAAAGGAAACCCCCTGTACAAGATTTCAGCGCGGGAGAACCTGCTATGCGAGGGACCTTCTGCTAACAAAAACATGTGCCTGCCCCGTTCTATAACCTCTcaagattactttttcaaagaaGATGGGAAGCTGGTGTCCACAAAGCTTGTAGATCAGGTGTGTTTGCACTTCAACAAGCTCACCGACAAAGCTTTTGATGACGAACTtaaccacaaacacaaaaaactaaGTCTGGGTGCTTATCTAGATGATGCCATTAGTGAATTTTCTCCAGCGATGACAGAAGATGGCCAACTGGTTTTTGAATGGTGCAAGAGGATTGAATGCACAGACGAGGCTTGCTCTAGTCTCTATGAAGTGTCTGCATCTCAGATTAGCTATTACACTGCCTTAGAGGGAGGATTCTTTAACACTTTGGGACCCGGTGGCTACCAAGCAATCTTAGATGTCCTCATGAGAGATATACCTGCAGGAACCATCCAGTGTAGTTCACCTGTCAAGAGCATCCGATGGGATTTAGTCAGGAAAGGTCATTGTGAAGACCAAAGGCATCCTGTTCAGGTTGTTTGTGAAAATGGAAAAAGCTTTGACGCAGACCATGTGATTGTCACAGTTTCTCTGGGGGTTCTCAAAGACAAAGCCTCAACCATGTTTGAACCATCCTTACCGCCAACAAAGCTGTCTGCGATTAAGAATCTCGGTTTTGGGATAGTAGATaaaattttcttgttttttgagAAGAAATTCTGGCCAGATGATTGTGCCGGGGTGCAGATGGTGTGGAAAGAGGGGCCAGAGAATAAAGACGTTTATGAATCTCTATCTGAAGGAGACACCTGGAAAAAGACGTGGTTCAAGAAGATCACCGGTTTTGATACAGTGGCCCGTCATCCCACGGCTCTGTGTGGCTGGATCACAGGTAGAGAAGCACTGTATATGGAGAATCTTCTGGATAGTGAAGTAGGAGATATCTGTGCAAGGTTGCTCAGGTCTTTCACAGGCTGGTCAGTGCCAGAGGTCTCAAAGACGCTGATCTCCAGATGGGGTTCTGACTCTCACGTCCGTGGATCCTACACATTTGTTCCTGATGGTGTTGATGGAGTAAAAGCACACAAGGCATTAGCATCACCTCTTCCACCTAAACAGAAATGCAGAGGGAAGAAGCACCTTCAGGTGTTGTTTGCTGGTGAAGCTACACACGTGAACTTCTACACCACGACCCACGGAGCGTATCTCTCAGGGGTCAGAGAAGCAGAACGACTGAAAAGCTTTTACACCAATTAAGCATACAGTCCCAAAGAGAGGAAAACATACACTTTGTTTCATAGTTATAACATttaagaattttacattttgtaattgcTCACACCCTAGTCTTACACAAAACTCATTTTATACCCATAGGTCGTTTACAGCTGCCTAGTAAACATCATTAACTGTGAGCGTTTAGCTACGTCAAGCTGGTCATGGTACGATTCATATCTCTGTCTTGTTAATTGTTAAACATCTCTGTGGTGTGCGTGTAGTGCCGACGGAGAAATATTCTTTCCCAATCTGCAAGGAAAGTTAaatcatattttcttaaaatgaaatacatttgcatacttttaagTAAATTAGAGCAGACGAGTTTTTAATCTGTGATACAGTGCCCTCAGGTGGCATGCAGCGTCACACATAACAATGTCATATTTATAGCGTTCACACTGTAATGACACAGAGCCTTGGTTTAAATGAATTGTTCAGCCGGGAATATTAACGTTGCTGTCTTTACACTGTGACTAGGTGGATGTAGGCCTGTATAGTGTTCCTTCATCTCGCTTCATTGGgtagcaaaacattttattatcatgCAGCCTTGAGAGAAGGTCGTGCTGCATAGTCTACTATTGCAAATCTTCATCTGCCATTGGATGCCCCACccaattatgtaaatatattgtatggaCCACAGAGGTCAGGTTTTACAGCTTTCAAAGCATGGGTACATAAAGggtacatatttgtatttgttcatttaaattaataaaactctAACA
>XM_043249032.1
aaaatcattatGCAGCCGTATAAGTGCAAACGAGAGAACGATATGCTGTGTTTCTGTTGCTCAGGAAAATATTTCTGACACGTCTGTGTATCTGACAAGTGTTGCATATAAGTCATTTTATCACCTTATTTGCGGTAGAAGTAACAGTTTGAGCGTCACCGTTACTAGGAACTGAACGACGTTTTCGCTTTCACTTTCATCCCCGATTGTAACGGGCCACTCCCGCCGGCCGGTCGCAGCAGAAAGTCGAACGCGCCTAATATCTAACTTAATCTGCCATTGGATGTACCATGACCGCcgtatataattatatagcCTGCTGCATGGATTACAAAGGGTTGGCCGCTGCGGCTACGTTGGTGAAGGCAGGATTCGTAAATGTCTTGGTTCTTGAGGCGAAGGAAAGAATTGGAGGTCGAGTGCACACCACTAAACCCTTCATCGAGAACATCATTGAAGTTGGAGCGAATTGGATCCATGGCAGGAAAGGAAACCCCCTGTACAAGATTTCAGCGCGGGAGAACCTGCTATGCGAGGGACCTTCTGCTAACAAAAACATGTGCCTGCCCCGTTCTATAACCTCTcaagattactttttcaaagaaGATGGGAAGCTGGTGTCCACAAAGCTTGTAGATCAGGTGTGTTTGCACTTCAACAAGCTCACCGACAAAGCTTTTGATGACGAACTtaaccacaaacacaaaaaactaaGTCTGGGTGCTTATCTAGATGATGCCATTAGTGAATTTTCTCCAGCGATGACAGAAGATGGCCAACTGGTTTTTGAATGGTGCAAGAGGATTGAATGCACAGACGAGGCTTGCTCTAGTCTCTATGAAGTGTCTGCATCTCAGATTAGCTATTACACTGCCTTAGAGGGAGGATTCTTTAACACTTTGGGACCCGGTGGCTACCAAGCAATCTTAGATGTCCTCATGAGAGATATACCTGCAGGAACCATCCAGTGTAGTTCACCTGTCAAGAGCATCCGATGGGATTTAGTCAGGAAAGGTCATTGTGAAGACCAAAGGCATCCTGTTCAGGTTGTTTGTGAAAATGGAAAAAGCTTTGACGCAGACCATGTGATTGTCACAGTTTCTCTGGGGGTTCTCAAAGACAAAGCCTCAACCATGTTTGAACCATCCTTACCGCCAACAAAGCTGTCTGCGATTAAGAATCTCGGTTTTGGGATAGTAGATaaaattttcttgttttttgagAAGAAATTCTGGCCAGATGATTGTGCCGGGGTGCAGATGGTGTGGAAAGAGGGGCCAGAGAATAAAGACGTTTATGAATCTCTATCTGAAGGAGACACCTGGAAAAAGACGTGGTTCAAGAAGATCACCGGTTTTGATACAGTGGCCCGTCATCCCACGGCTCTGTGTGGCTGGATCACAGGTAGAGAAGCACTGTATATGGAGAATCTTCTGGATAGTGAAGTAGGAGATATCTGTGCAAGGTTGCTCAGGTCTTTCACAGGCTGGTCAGTGCCAGAGGTCTCAAAGACGCTGATCTCCAGATGGGGTTCTGACTCTCACGTCCGTGGATCCTACACATTTGTTCCTGATGGTGTTGATGGAGTAAAAGCACACAAGGCATTAGCATCACCTCTTCCACCTAAACAGAAATGCAGAGGGAAGAAGCACCTTCAGGTGTTGTTTGCTGGTGAAGCTACACACGTGAACTTCTACACCACGACCCACGGAGCGTATCTCTCAGGGGTCAGAGAAGCAGAACGACTGAAAAGCTTTTACACCAATTAAGCATACAGTCCCAAAGAGAGGAAAACATACACTTTGTTTCATAGTTATAACATttaagaattttacattttgtaattgcTCACACCCTAGTCTTACACAAAACTCATTTTATACCCATAGGTCGTTTACAGCTGCCTAGTAAACATCATTAACTGTGAGCGTTTAGCTACGTCAAGCTGGTCATGGTACGATTCATATCTCTGTCTTGTTAATTGTTAAACATCTCTGTGGTGTGCGTGTAGTGCCGACGGAGAAATATTCTTTCCCAATCTGCAAGGAAAGTTAaatcatattttcttaaaatgaaatacatttgcatacttttaagTAAATTAGAGCAGACGAGTTTTTAATCTGTGATACAGTGCCCTCAGGTGGCATGCAGCGTCACACATAACAATGTCATATTTATAGCGTTCACACTGTAATGACACAGAGCCTTGGTTTAAATGAATTGTTCAGCCGGGAATATTAACGTTGCTGTCTTTACACTGTGACTAGGTGGATGTAGGCCTGTATAGTGTTCCTTCATCTCGCTTCATTGGgtagcaaaacattttattatcatgCAGCCTTGAGAGAAGGTCGTGCTGCATAGTCTACTATTGCAAATCTTCATCTGCCATTGGATGCCCCACccaattatgtaaatatattgtatggaCCACAGAGGTCAGGTTTTACAGCTTTCAAAGCATGGGTACATAAAGggtacatatttgtatttgttcatttaaattaataaaactctAACA

Function

NR:

description
PREDICTED: peroxisomal N(1)-acetyl-spermine/spermidine oxidase-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K13367 FMS1; polyamine oxidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249031.1 True 2761 mRNA 0.43 3 22616864 22620788
XM_043249032.1 False 2524 mRNA 0.43 4 22616864 22620788

Neighbor

gene id symbol gene type direction distance location
LOC122351760 LOC107755372 coding downstream 1083 22611358 ~ 22615781 (-)
dnajc10 dnajc10,LOC107755373,LOC107739439,LOC107699025,LOC107676092 coding downstream 6795 22597828 ~ 22610069 (-)
dusp19a dusp19a,dusp19,LOC107739447,LOC107699004,LOC107601374,LOC107601606,LOC107755360,LOC106586411 coding downstream 75154 22537975 ~ 22541710 (-)
LOC122351832 NA coding downstream 132155 22482226 ~ 22484709 (-)
LOC122352034 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC106582264 coding downstream 218211 22341408 ~ 22398653 (-)
vil1 vil1,LOC107699006,LOC107676071,LOC107755365,LOC107601613,LOC107739444 coding upstream 1270 22622058 ~ 22635997 (-)
itgb2 LOC107699026,LOC107739438,LOC107601382,LOC107676087,LOC107601617,LOC107755371 coding upstream 16107 22636895 ~ 22645747 (-)
agr1 agr1,LOC107718316,LOC107692342,LOC107601372,LOC107754004,LOC107695966,LOC107560612 coding upstream 281660 22902448 ~ 22906312 (-)
hdac4 hdac4,LOC107560613,LOC107601379,LOC107741589 coding upstream 385050 23005838 ~ 23244247 (-)
LOC122352042 LOC107704822,LOC107739717,LOC107688954,LOC107601359,LOC107741586,LOC107601360 coding upstream 660726 23281514 ~ 23290139 (-)
LOC122352087 NA non-coding downstream 28613 22585744 ~ 22588251 (-)
G72583 NA non-coding downstream 36092 22579803 ~ 22580772 (-)
G72535 NA non-coding downstream 158106 22311078 ~ 22458758 (-)
G72537 pde1a,LOC108443795,LOC107716994,LOC107699023 non-coding downstream 306386 22307182 ~ 22310478 (-)
G72502 ppp1r1c,LOC107699022,LOC107601387,LOC107716995,LOC107755374,LOC107676093 non-coding downstream 321796 22286774 ~ 22295068 (-)
G72605 NA non-coding upstream 31714 22652502 ~ 22653575 (-)
G72603 LOC107739437,LOC107699030,LOC107601381,LOC107676090,LOC107755369,LOC107755357 non-coding upstream 37529 22658317 ~ 22658828 (-)
G72608 NA non-coding upstream 46109 22666897 ~ 22667111 (-)
G72615 NA non-coding upstream 79941 22700729 ~ 22701019 (-)
G72646 NA non-coding upstream 207310 22828098 ~ 22891619 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other downstream 105557 22297007 ~ 22511307 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other downstream 393197 22171463 ~ 22223667 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other downstream 890044 21709288 ~ 21726820 (-)
G71938 nab1,LOC107565022 other downstream 2112974 20489164 ~ 20503890 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other downstream 2723549 19881550 ~ 19893315 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other upstream 1309419 23930207 ~ 23931329 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other upstream 1323197 23943985 ~ 23960325 (-)
G72978 LOC107722896,LOC107674757,LOC107558607,LOC107677899,LOC107755197,LOC107600691 other upstream 1599734 24220522 ~ 24280708 (-)
G73201 NA other upstream 2406797 25027585 ~ 25030965 (-)
G73301 NA other upstream 2727990 25348778 ~ 25349640 (-)

Expression


Co-expression Network