pms1 (pms1,LOC107602147,LOC107728929,LOC107660601,LOC107714373,LOC107565013)


Basic Information

Item Value
gene id pms1
gene name pms1,LOC107602147,LOC107728929,LOC107660601,LOC107714373,LOC107565013
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19684890 ~ 19708970 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249042.1
GTCATATCCGATACTCGAGCGAGTCTTCAAAACATGTGAAGTGCACTTGTGTTATGAATTTATTGGATAACTTCTAAcggattattgttttttttaatggtttttttttcgaAAAGGAGCAGACTATGAAGGCGCTTCCACCTGAAACCGTGCGTCTGCTGTGCAGCTCTCAGGTTATAACATCTGTCCTGAATGTTGTCAAAGAGCTGGTAGAAAATACACTTGATGCTGGTTCCTCAAGCCTTGAAGTCAAACTGGAGAATTATGGATTGGATCGCATTGAAGTCAGAGACAATGGTTCCGGAATCAAAGCCACTGATGTCCCTGTGATGGCTGTGAAACACTACACATCTAAAATCTCCTGCCACGAAGACCTGGAGCGCCTAGAGACTTACGGCTTCAGAGGAGAGGCTCTGGCATCTATATGTGCCATATCAGAGGTGGTCATTACAACCAAAACTGCGGATGATGATTTTAGCATTCAGTATTCAGTCGATCACAATGGACAGATCGTCTCTCAAAAGCCGTCACATCTTGGCGAGGGCACCACTGTGTGTGCAGCAAATCTGTTCAAGAATCTCCCTGTCAGACGGCAGTATTATTCCAACACTAAAAAATGCAAAGAGGAACTGAAGAGGGTCCAGATTTTACTCACGGCCTATGCTGTTGTTAAACCTGAGTTAAGGATCACATTGAGCCACAACAAGGCTGTGGTCTGGCAGAAGTCCAGGGTGTCGGATCACCGAACTGCCCTCATGGCCGTGCTCGGAGCGGCCTCCGTAGCCAACATGCTCCCCGTCCAGCATCACCAGGAGCAACCAGAGATTGGCATCGATGGATTCTTTCCCAAACCGGGCTCAGATTTTAATTCCACCAGCTCCTCTACGCCTGATAAAacattcatctttgttaatagTCGACCTGTGCATCACAAAGAAATACTTAAGCTTTTTAAGCAATACTACACCAGCGCTCAATCTAATAAAGAATCTGCCAATCGCCGTTATCCCTTTGTGTTGATAAACATCACCATACCTCCCTCGACTGTGGATGTTAACCTGACTCCTGATAAAACCGAAGTGATGCTACAGAACAAGGAAGAAGTCCTGTTAGCATTGGAGACTATGTTAATCTCCTTGTATGGGTACTCCATTGACAATGATGATCTCAAATCTGGAGGAAATCGCCCTGGTGTTAGTTCTGTGAATGCACCTGAACACACTGATGTAGTACCTACACCTTCCACTGATGTTAGTTTGGAAGATGCAGAATTACTTGAGATTTCTCCTGCAAATGCCGATAAACAAGATGGTGAGCTATCCTTGAGCAACACCGCAAACACCAGCTCCTCTTCGATTTCAGAGGATTGGGTGATCAACAGAAGCTCAAGTGATTTCGACAGTATTAATTCCTCATTACCCGCTGACGATGTTGTAATGAACTCTACAGCTGATCTAAACTGTAACTCCCCAAAGGCGTCTAAGAGTGACAGCGGCCCTGGTCAAGAGAGCGAAGTGTCTGCTGAGAGCTGGAGCACGGGCAAGGCCTTCTCAAATGAAGTCACCAGAGAAAGCCTAGAACCTGTGAAACTACATGTCCCGAAAGCCCATGAAGCCCTCGGAGGAACCCAGCCCACATGCACGAGGTCCAGCCCGTCCAAGAGGCCTTCTAACGTTATTATGGAGAAAATGGCCAAGCTGACAGCCTACGAGCTGATCAGCAACCGCTCCGTGCGTCAGCCCTCGTCTGCCTTTTCACTGTTTGAGCAAGACACCAGATCGCTGGTCCTCCAGGAGAGCCCAAGAGCCAGTCCTCAGGATGTCACAACTGCTGTGAAAGAGAGATGGGAAAGCCTCGGGGAGGAAGACCGCAAGAAGTATGAAAGCAAGGCAGAAAAGTCTCTGAACGCCTACAACCTTCAAAGGAAGAGGGCAGCGGAGGGAGGTGGCCAGTGCGGAGAGGGCAAGAAGCAGATGAGCGCCGAGTCTTCATTGAACAAAGCTCAAGGCGTGAAGCGCAAGGCCCCCCTCGCCAACCAGCAGGCCCTGGACAAACTCTTCTCCTCTCAGCCCTCGAGTAAGAGGAGCCCTGCCAAGCTCTCCAAACCCCTCCCGTTCAGTATTGCAACCCTCAAGCAGAGTCTTAACCTCCTCTCCTACCAGAACAGCTCAAGTGCGCAGGGCCTCAGGCTTGTAAACCGCTTGGCTTCTCACGGTGCCTGGGTCGTTTTATGCGGCAGAAAGCTCATGCTGTTGAACCCGTTTCGAGTGGAGGAGGCCTTGCTGTTTAAAAGACTTCTGGAGAATAATATACTTCCAACCGTGAGGCTGCAGACCCCTGTACAGCTGACAGATGGAGTGCTTGGTGGGCCTGAGTACATGGATGTTCTCCTGAACATGGAGAAAGGCAGCGCCTGCTTCAATGGAGACATCTATTTCACTGATCCTAGGCTCGTGGCAAATGGTTTTGAGATTAAGATGATTCCAGATGCACCTAGGGAAAAGCAATCATCTTTAAATCATCTGTTGAAAACCTCCTCCACCTTGGTTTTTCTTTCCAGTCCACAAAGACATGGTAATAGCGTAATTTGGTGCGATGCCCGCCTGACTTGGTTTCCAACCAGTTTCTCGTCTTCTGAGAGGCATGTTGAAGTGACGGGCATGGCCGACTGCATGCCTTTCTTCGGGATAGGAGACCTGAGGGAGATTCTGCGGGCTATAAAGGTCCAGGATGCAAAAACCGTGGAGCAATGTAGACCTCTCAAAGTCTCAAACTACCTAGAGAGTGAAGCTGTGAGACTAGCTAGACAGTTACCGCTGAACCTCACCAGAGCTGATGTTACAAATACGCTTTGCCGAATGAAACAGGAACTCGAAGAGGAGAGTCAGGTCTGCATTCACAGACGACCATTTTTTCACAATCTGGTTACCGTTCCTGAAACTGAGCAGGATGCTCAGCAAATCATATCTAATTCTTGCTAAGGACTGAAACCAAATTGTCACACTAACATTTATTGTACCATATACTAGTATGAAAGTTGTGATTTGGAATAATAAATGTTTGCCTTGTTGAATTACGGTTTTAATTGATGATTTGAGATGTAAATGATTCTGATTGTCTGTGTTTAATCAAGAAGAATATGTATTGCTTAGGTGGTTTCCAACCAGAAAGAACTGCAAGATCTATGCACACGCATCactatttcatatttcatatcacACCATGTTGCAAacagaataaatgtaattaagatttattaaatgGCTGTTTCAGTCCAGATCTGACATCGCTGGGTCATGAGTGATGTTAATTTTTACGAACGATTTTATGAGggcaaaaaaaatctgaatatcaATTACGATACAAAATCAATTTTCATTGATGGTTTGCTTTTCTGTCTTAATCTATTCCGGAAAATTACTGATAATGAAGGAAATGGCAATCGCTCAACTTTAAATGTTTGCCTTGTTGACTTTTgattagaaaagaaaacaagccAGAACTACTGACCCCACAGCAGATGCTAGTGAACCACAAAATTTAATGCAGTGTGGTTGTAAATTCACTTTCCCCCAAAAATCAGCACCTTAAATGCTGATCATGAAAGTCGGCGCTAGGGGCCCATAAAGCCAGAAGGGTTGGGCTCTGGGTTTTGCCGAAAAAGTGTGCAGTCACAGTCAGGGACCTCCAATTACCAGCTGAAAATAAGGCTCAGATGCTGTGAAGTTTTAACAGTTGCTCCCCTGTAGCCATATGGTTTGTGGTTTTTTAGTGTTTGATCAGTTCCACGAACTGCATTTTAACCTCTGGGGACCCAGTATTTCATGTTCGTCCTCTGTAGAGGACACGAGTCCACAATTTtgagtctttatttttttaaggaaatgaaTACCTTTATTCCGACTGATCAAAATTGTGAACAGTAAagacaatattacaaaaaaataaatatttatttcaacattgCATTGTATCTTGTTTTCCAAAACcatattaacatgtttttaacattgacaaTAATATGTAATGATTCTTGAGCACCACACCAACATtttcttaaggatcatgtgacattaagaactggagaaaaaaacaattttcaaataataaatttttttaaattgttacaatattttgtaatattttgactGAATTTATGTGTACGATGcagaacaatattaaataatcctttaataaaatgaatggtAGTTTTCCTAgttaaaaggaaagaaaaacatttaaagaaaatgtaggAACCTTGTTTCATTCTTAAAGAATGATAAAAAgcacaacataaaac
>XM_043249043.1
GTCATATCCGATACTCGAGCGAGTCTTCAAAACATGTGAAGTGCACTTGTGTTATGAATTTATTGGATAACTTCTAAcggattattgttttttttaatggtttttttttcgaAAAGGAGCAGACTATGAAGGCGCTTCCACCTGAAACCGTGCGTCTGCTGTGCAGCTCTCAGGTTATAACATCTGTCCTGAATGTTGTCAAAGAGCTGGTAGAAAATACACTTGATGCTGGTTCCTCAAGCCTTGAAGTCAAACTGGAGAATTATGGATTGGATCGCATTGAAGTCAGAGACAATGGTTCCGGAATCAAAGCCACTGATGTCCCTGTGATGGCTGTGAAACACTACACATCTAAAATCTCCTGCCACGAAGACCTGGAGCGCCTAGAGACTTACGGCTTCAGAGGAGAGGCTCTGGCATCTATATGTGCCATATCAGAGGTGGTCATTACAACCAAAACTGCGGATGATGATTTTAGCATTCAGTATTCAGTCGATCACAATGGACAGATCGTCTCTCAAAAGCCGTCACATCTTGGCGAGGGCACCACTGTGTGTGCAGCAAATCTGTTCAAGAATCTCCCTGTCAGACGGCAGTATTATTCCAACACTAAAAAATGCAAAGAGGAACTGAAGAGGGTCCAGATTTTACTCACGGCCTATGCTGTTGTTAAACCTGAGTTAAGGATCACATTGAGCCACAACAAGGCTGTGGTCTGGCAGAAGTCCAGGGTGTCGGATCACCGAACTGCCCTCATGGCCGTGCTCGGAGCGGCCTCCGTAGCCAACATGCTCCCCGTCCAGCATCACCAGGAGCAACCAGAGATTGGCATCGATGGATTCTTTCCCAAACCGGGCTCAGATTTTAATTCCACCAGCTCCTCTACGCCTGATAAAacattcatctttgttaatagTCGACCTGTGCATCACAAAGAAATACTTAAGCTTTTTAAGCAATACTACACCAGCGCTCAATCTAATAAAGAATCTGCCAATCGCCGTTATCCCTTTGTGTTGATAAACATCACCATACCTCCCTCGACTGTGGATGTTAACCTGACTCCTGATAAAACCGAAGTGATGCTACAGAACAAGGAAGAAGTCCTGTTAGCATTGGAGACTATGTTAATCTCCTTGTATGGGTACTCCATTGACAATGATGATCTCAAATCTGGAGGAAATCGCCCTGGTGTTAGTTCTGTGAATGCACCTGAACACACTGATGTAGTACCTACACCTTCCACTGATGTTAGTTTGGAAGATGCAGAATTACTTGAGATTTCTCCTGCAAATGCCGATAAACAAGATGGTGAGCTATCCTTGAGCAACACCGCAAACACCAGCTCCTCTTCGATTTCAGAGGATTGGGTGATCAACAGAAGCTCAAGTGATTTCGACAGTATTAATTCCTCATTACCCGCTGACGATGTTGTAATGAACTCTACAGCTGATCTAAACTGTAACTCCCCAAAGGCGTCTAAGAGTGACAGCGGCCCTGGTCAAGAGAGCGAAGTGTCTGCTGAGAGCTGGAGCACGGGCAAGGCCTTCTCAAATGAAGTCACCAGAGAAAGCCTAGAACCTGTGAAACTACATGTCCCGAAAGCCCATGAAGCCCTCGGAGGAACCCAGCCCACATGCACGAGGTCCAGCCCGTCCAAGAGGCCTTCTAACGTTATTATGGAGAAAATGGCCAAGCTGACAGCCTACGAGCTGATCAGCAACCGCTCCGTGCGTCAGCCCTCGTCTGCCTTTTCACTGTTTGAGCAAGACACCAGATCGCTGGTCCTCCAGGAGAGCCCAAGAGCCAGTCCTCAGGATGTCACAACTGCTGTGAAAGAGAGATGGGAAAGCCTCGGGGAGGAAGACCGCAAGAAGTATGAAAGCAAGGCAGAAAAGTCTCTGAACGCCTACAACCTTCAAAGGAAGAGGGCAGCGGAGGGAGGTGGCCAGTGCGGAGAGGGCAAGAAGCAGATGAGCGCCGAGTCTTCATTGAACAAAGCTCAAGGCGTGAAGCGCAAGGCCCCCCTCGCCAACCAGCAGGCCCTGGACAAACTCTTCTCCTCTCAGCCCTCGAGTAAGAGGAGCCCTGCCAAGCTCTCCAAACCCCTCCCGTTCAGTATTGCAACCCTCAAGCAGAGTCTTAACCTCCTCTCCTACCAGAACAGCTCAAGTGCGCAGGGCCTCAGGCTTGTAAACCGCTTGGCTTCTCACGGTGCCTGGGTCGTTTTATGCGGCAGAAAGCTCATGCTGTTGAACCCGTTTCGAGTGGAGGAGGCCTTGCTGTTTAAAAGACTTCTGGAGAATAATATACTTCCAACCGTGAGGCTGCAGACCCCTGTACAGCTGACAGATGGAGTGCTTGGTGGGCCTGAGTACATGGATGTTCTCCTGAACATGGAGAAAGGCAGCGCCTGCTTCAATGGAGACATCTATTTCACTGATCCTAGGCTCGTGGCAAATGGTTTTGAGATTAAGATGATTCCAGGTTTCTCGTCTTCTGAGAGGCATGTTGAAGTGACGGGCATGGCCGACTGCATGCCTTTCTTCGGGATAGGAGACCTGAGGGAGATTCTGCGGGCTATAAAGGTCCAGGATGCAAAAACCGTGGAGCAATGTAGACCTCTCAAAGTCTCAAACTACCTAGAGAGTGAAGCTGTGAGACTAGCTAGACAGTTACCGCTGAACCTCACCAGAGCTGATGTTACAAATACGCTTTGCCGAATGAAACAGGAACTCGAAGAGGAGAGTCAGGTCTGCATTCACAGACGACCATTTTTTCACAATCTGGTTACCGTTCCTGAAACTGAGCAGGATGCTCAGCAAATCATATCTAATTCTTGCTAAGGACTGAAACCAAATTGTCACACTAACATTTATTGTACCATATACTAGTATGAAAGTTGTGATTTGGAATAATAAATGTTTGCCTTGTTGAATTACGGTTTTAATTGATGATTTGAGATGTAAATGATTCTGATTGTCTGTGTTTAATCAAGAAGAATATGTATTGCTTAGGTGGTTTCCAACCAGAAAGAACTGCAAGATCTATGCACACGCATCactatttcatatttcatatcacACCATGTTGCAAacagaataaatgtaattaagatttattaaatgGCTGTTTCAGTCCAGATCTGACATCGCTGGGTCATGAGTGATGTTAATTTTTACGAACGATTTTATGAGggcaaaaaaaatctgaatatcaATTACGATACAAAATCAATTTTCATTGATGGTTTGCTTTTCTGTCTTAATCTATTCCGGAAAATTACTGATAATGAAGGAAATGGCAATCGCTCAACTTTAAATGTTTGCCTTGTTGACTTTTgattagaaaagaaaacaagccAGAACTACTGACCCCACAGCAGATGCTAGTGAACCACAAAATTTAATGCAGTGTGGTTGTAAATTCACTTTCCCCCAAAAATCAGCACCTTAAATGCTGATCATGAAAGTCGGCGCTAGGGGCCCATAAAGCCAGAAGGGTTGGGCTCTGGGTTTTGCCGAAAAAGTGTGCAGTCACAGTCAGGGACCTCCAATTACCAGCTGAAAATAAGGCTCAGATGCTGTGAAGTTTTAACAGTTGCTCCCCTGTAGCCATATGGTTTGTGGTTTTTTAGTGTTTGATCAGTTCCACGAACTGCATTTTAACCTCTGGGGACCCAGTATTTCATGTTCGTCCTCTGTAGAGGACACGAGTCCACAATTTtgagtctttatttttttaaggaaatgaaTACCTTTATTCCGACTGATCAAAATTGTGAACAGTAAagacaatattacaaaaaaataaatatttatttcaacattgCATTGTATCTTGTTTTCCAAAACcatattaacatgtttttaacattgacaaTAATATGTAATGATTCTTGAGCACCACACCAACATtttcttaaggatcatgtgacattaagaactggagaaaaaaacaattttcaaataataaatttttttaaattgttacaatattttgtaatattttgactGAATTTATGTGTACGATGcagaacaatattaaataatcctttaataaaatgaatggtAGTTTTCCTAgttaaaaggaaagaaaaacatttaaagaaaatgtaggAACCTTGTTTCATTCTTAAAGAATGATAAAAAgcacaacataaaac
>XM_043249044.1
GTCATATCCGATACTCGAGCGAGTCTTCAAAACATGTGAAGTGCACTTGTGTTATGAATTTATTGGATAACTTCTAAcggattattgttttttttaatggtttttttttcgaAAAGGAGCAGACTATGAAGGCGCTTCCACCTGAAACCGTGCGTCTGCTGTGCAGCTCTCAGGTTATAACATCTGTCCTGAATGTTGTCAAAGAGCTGGTAGAAAATACACTTGATGCTGGTTCCTCAAGCCTTGAAGTCAAACTGGAGAATTATGGATTGGATCGCATTGAAGTCAGAGACAATGGTTCCGGAATCAAAGCCACTGATGTCCCTGTGATGGCTGTGAAACACTACACATCTAAAATCTCCTGCCACGAAGACCTGGAGCGCCTAGAGACTTACGGCTTCAGAGGAGAGGCTCTGGCATCTATATGTGCCATATCAGAGGTGGTCATTACAACCAAAACTGCGGATGATGATTTTAGCATTCAGTATTCAGTCGATCACAATGGACAGATCGTCTCTCAAAAGCCGTCACATCTTGGCGAGGGCACCACTGTGTGTGCAGCAAATCTGTTCAAGAATCTCCCTGTCAGACGGCAGTATTATTCCAACACTAAAAAATGCAAAGAGGAACTGAAGAGGGTCCAGATTTTACTCACGGCCTATGCTGTTGTTAAACCTGAGTTAAGGATCACATTGAGCCACAACAAGGCTGTGGTCTGGCAGAAGTCCAGGGTGTCGGATCACCGAACTGCCCTCATGGCCGTGCTCGGAGCGGCCTCCGTAGCCAACATGCTCCCCGTCCAGCATCACCAGGAGCAACCAGAGATTGGCATCGATGGATTCTTTCCCAAACCGGGCTCAGATTTTAATTCCACCAGCTCCTCTACGCCTGATAAAacattcatctttgttaatagTCGACCTGTGCATCACAAAGAAATACTTAAGCTTTTTAAGCAATACTACACCAGCGCTCAATCTAATAAAGAATCTGCCAATCGCCGTTATCCCTTTGTGTTGATAAACATCACCATACCTCCCTCGACTGTGGATGTTAACCTGACTCCTGATAAAACCGAAGTGATGCTACAGAACAAGGAAGAAGTCCTGTTAGCATTGGAGACTATGTTAATCTCCTTGTATGGGTACTCCATTGACAATGATGATCTCAAATCTGGAGGAAATCGCCCTGGTGTTAGTTCTGTGAATGCACCTGAACACACTGATGTAGTACCTACACCTTCCACTGATGTTAGTTTGGAAGATGCAGAATTACTTGAGATTTCTCCTGCAAATGCCGATAAACAAGATGGTGAGCTATCCTTGAGCAACACCGCAAACACCAGCTCCTCTTCGATTTCAGAGGATTGGGTGATCAACAGAAGCTCAAGTGATTTCGACAGTATTAATTCCTCATTACCCGCTGACGATGTTGTAATGAACTCTACAGCTGATCTAAACTGTAACTCCCCAAAGGCGTCTAAGAGTGACAGCGGCCCTGGTCAAGAGAGCGAAGTGTCTGCTGAGAGCTGGAGCACGGGCAAGGCCTTCTCAAATGAAGTCACCAGAGAAAGCCTAGAACCTGTGAAACTACATGTCCCGAAAGCCCATGAAGCCCTCGGAGGAACCCAGCCCACATGCACGAGGTCCAGCCCGTCCAAGAGGCCTTCTAACGTTATTATGGAGAAAATGGCCAAGCTGACAGCCTACGAGCTGATCAGCAACCGCTCCGTGCGTCAGCCCTCGTCTGCCTTTTCACTGTTTGAGCAAGACACCAGATCGCTGGTCCTCCAGGAGAGCCCAAGAGCCAGTCCTCAGGATGTCACAACTGCTGTGAAAGAGAGATGGGAAAGCCTCGGGGAGGAAGACCGCAAGAAGTATGAAAGCAAGGCAGAAAAGTCTCTGAACGCCTACAACCTTCAAAGGAAGAGGGCAGCGGAGGGAGGTGGCCAGTGCGGAGAGGGCAAGAAGCAGATGAGCGCCGAGTCTTCATTGAACAAAGCTCAAGGCGTGAAGCGCAAGGCCCCCCTCGCCAACCAGCAGGCCCTGGACAAACTCTTCTCCTCTCAGCCCTCGAGTAAGAGGAGCCCTGCCAAGCTCTCCAAACCCCTCCCGTTCAGTATTGCAACCCTCAAGCAGAGTCTTAACCTCCTCTCCTACCAGAACAGCTCAAGTGCGCAGGGCCTCAGGCTTGTAAACCGCTTGGCTTCTCACGGTGCCTGGGTCGTTTTATGCGGCAGAAAGCTCATGCTGTTGAACCCGTTTCGAGTGGAGGAGGCCTTGCTGTTTAAAAGACTTCTGGAGAATAATATACTTCCAACCGTGAGGCTGCAGACCCCTGTACAGCTGACAGATGGAGTGCTTGGTGGGCCTGAGTACATGGATGTTCTCCTGAACATGGAGAAAGGCAGCGCCTGCTTCAATGGAGACATCTATTTCACTGATCCTAGGCTCGTGGCAAATGGTTTTGAGATTAAGATGATTCCAGTCCACAAAGACATGGTAATAGCGTAATTTGGTGCGATGCCCGCCTGACTTGGTTTCCAACCAGTGCGTaaatcacaatatttatttattattttttcctggAGAATGTTGTACTTGGAGTTTATTAATCCTTGCTTGTTGCTTATCTTGGCCAGGTTTCTCGTCTTCTGAGAGGCATGTTGAAGTGACGGGCATGGCCGACTGCATGCCTTTCTTCGGGATAGGAGACCTGAGGGAGATTCTGCGGGCTATAAAGGTCCAGGATGCAAAAACCGTGGAGCAATGTAGACCTCTCAAA
>XM_043249045.1
GTCATATCCGATACTCGAGCGAGTCTTCAAAACATGTGAAGTGCACTTGTGTTATGAATTTATTGGATAACTTCTAAcggattattgttttttttaatggtttttttttcgaAAAGGAGCAGACTATGAAGGCGCTTCCACCTGAAACCGTGCGTCTGCTGTGCAGCTCTCAGGTTATAACATCTGTCCTGAATGTTGTCAAAGAGCTGGTAGAAAATACACTTGATGCTGGTTCCTCAAGCCTTGAAGTCAAACTGGAGAATTATGGATTGGATCGCATTGAAGTCAGAGACAATGGTTCCGGAATCAAAGCCACTGATGTCCCTGTGATGGCTGTGAAACACTACACATCTAAAATCTCCTGCCACGAAGACCTGGAGCGCCTAGAGACTTACGGCTTCAGAGGAGAGGCTCTGGCATCTATATGTGCCATATCAGAGGTGGTCATTACAACCAAAACTGCGGATGATGATTTTAGCATTCAGTATTCAGTCGATCACAATGGACAGATCGTCTCTCAAAAGCCGTCACATCTTGGCGAGGGCACCACTGTGTGTGCAGCAAATCTGTTCAAGAATCTCCCTGTCAGACGGCAGTATTATTCCAACACTAAAAAATGCAAAGAGGAACTGAAGAGGGTCCAGATTTTACTCACGGCCTATGCTGTTGTTAAACCTGAGTTAAGGATCACATTGAGCCACAACAAGGCTGTGGTCTGGCAGAAGTCCAGGGTGTCGGATCACCGAACTGCCCTCATGGCCGTGCTCGGAGCGGCCTCCGTAGCCAACATGCTCCCCGTCCAGCATCACCAGGAGCAACCAGAGATTGGCATCGATGGATTCTTTCCCAAACCGGGCTCAGATTTTAATTCCACCAGCTCCTCTACGCCTGATAAAacattcatctttgttaatagTCGACCTGTGCATCACAAAGAAATACTTAAGCTTTTTAAGCAATACTACACCAGCGCTCAATCTAATAAAGAATCTGCCAATCGCCGTTATCCCTTTGTGTTGATAAACATCACCATACCTCCCTCGACTGTGGATGTTAACCTGACTCCTGATAAAACCGAAGTGATGCTACAGAACAAGGAAGAAGTCCTGTTAGCATTGGAGACTATGTTAATCTCCTTGTATGGGTACTCCATTGACAATGATGATCTCAAATCTGGAGGAAATCGCCCTGGTGTTAGTTCTGTGAATGCACCTGAACACACTGATGTAGTACCTACACCTTCCACTGATGTTAGTTTGGAAGATGCAGAATTACTTGAGATTTCTCCTGCAAATGCCGATAAACAAGATGGTGAGCTATCCTTGAGCAACACCGCAAACACCAGCTCCTCTTCGATTTCAGAGGATTGGGTGATCAACAGAAGCTCAAGTGATTTCGACAGTATTAATTCCTCATTACCCGCTGACGATGTTGTAATGAACTCTACAGCTGATCTAAACTGTAACTCCCCAAAGGCGTCTAAGAGTGACAGCGGCCCTGGTCAAGAGAGCGAAGTGTCTGCTGAGAGCTGGAGCACGGGCAAGGCCTTCTCAAATGAAGTCACCAGAGAAAGCCTAGAACCTGTGAAACTACATGTCCCGAAAGCCCATGAAGCCCTCGGAGGAACCCAGCCCACATGCACGAGGTCCAGCCCGTCCAAGAGGCCTTCTAACGTTATTATGGAGAAAATGGCCAAGCTGACAGCCTACGAGCTGATCAGCAACCGCTCCGTGCGTCAGCCCTCGTCTGCCTTTTCACTGTTTGAGCAAGACACCAGATCGCTGGTCCTCCAGGAGAGCCCAAGAGCCAGTCCTCAGGATGTCACAACTGCTGTGAAAGAGAGATGGGAAAGCCTCGGGGAGGAAGACCGCAAGAAGTATGAAAGCAAGGCAGAAAAGTCTCTGAACGCCTACAACCTTCAAAGGAAGAGGGCAGCGGAGGGAGGTGGCCAGTGCGGAGAGGGCAAGAAGCAGATGAGCGCCGAGTCTTCATTGAACAAAGCTCAAGGCGTGAAGCGCAAGGCCCCCCTCGCCAACCAGCAGGCCCTGGACAAACTCTTCTCCTCTCAGCCCTCGAGTAAGAGGAGCCCTGCCAAGCTCTCCAAACCCCTCCCGTTCAGTATTGCAACCCTCAAGCAGAGTCTTAACCTCCTCTCCTACCAGAACAGCTCAAGTGCGCAGGGCCTCAGGCTTGTAAACCGCTTGGCTTCTCACGGTGCCTGGGTCGTTTTATGCGGCAGAAAGCTCATGCTGTTGAACCCGTTTCGAGTGGAGGAGGCCTTGCTGTTTAAAAGACTTCTGGAGAATAATATACTTCCAACCGTGAGGCTGCAGACCCCTGTACAGCTGACAGATGGAGTGCTTGGTGGGCCTGAGTACATGGATGTTCTCCTGAACATGGAGAAAGGCAGCGCCTGCTTCAATGGAGACATCTATTTCACTGATCCTAGGCTCGTGGCAAATGGTTTTGAGATTAAGATGATTCCAGTCCACAAAGACATGGTAATAGCGTAATTTGGTGCGATGCCCGCCTGACTTGGTTTCCAACCAGTTTCTCGTCTTCTGAGAGGCATGTTGAAGTGACGGGCATGGCCGACTGCATGCCTTTCTTCGGGATAGGAGACCTGAGGGAGATTCTGCGGGCTATAAAGGTCCAGGATGCAAAAACCGTGGAGCAATGTAGACCTCTC

Function

symbol description
pms1 Predicted to enable ATP hydrolysis activity. Predicted to be involved in mismatch repair. Predicted to act upstream of or within cellular response to DNA damage stimulus. Predicted to be located in nucleus. Predicted to be part of mismatch repair complex. Human ortholog(s) of this gene implicated in Lynch syndrome; dermatomyositis; pancreatic ductal carcinoma; and polymyositis. Orthologous to human PMS1 (PMS1 homolog 1, mismatch repair system component).

NR:

description
PMS1 protein homolog 1

GO:

id name namespace
GO:0006298 mismatch repair biological_process
GO:0006200 obsolete ATP catabolic process biological_process
GO:0007131 reciprocal meiotic recombination biological_process
GO:0032389 MutLalpha complex cellular_component
GO:0030983 mismatched DNA binding molecular_function
GO:0005524 ATP binding molecular_function
GO:0032407 MutSalpha complex binding molecular_function
GO:0003697 single-stranded DNA binding molecular_function
GO:0016887 ATPase activity molecular_function

KEGG:

id description
K10864 PMS1; DNA mismatch repair protein PMS1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249042.1 True 4300 mRNA 0.44 14 19684890 19708970
XM_043249043.1 False 4165 mRNA 0.44 13 19684890 19708970
XM_043249044.1 False 2784 mRNA 0.48 12 19687834 19708970
XM_043249045.1 False 2689 mRNA 0.49 13 19687837 19708970

Neighbor

gene id symbol gene type direction distance location
pofut2 LOC107741944,LOC107660604,LOC107714363,LOC107657505,LOC107565035 coding downstream 41957 19636451 ~ 19642933 (-)
abca12 LOC107657499,LOC107714367,LOC107602131,LOC107660608,LOC107741931,LOC107565025 coding downstream 50089 19569168 ~ 19634801 (-)
bard1 LOC107741928,LOC107660605,LOC107602130 coding downstream 116130 19546224 ~ 19568760 (-)
ikzf2 si:zfos-1425h8.1,LOC107741927,LOC107660609,LOC107662042,LOC107721023,LOC107556196,LOC107568511 coding downstream 399667 19259729 ~ 19285223 (-)
LOC122351886 erbb4,LOC107741926,LOC107660610,LOC107721020,LOC107662043,LOC107555909 coding downstream 435715 18980278 ~ 19249175 (-)
adat3 LOC107728938,LOC107714375,LOC107681677,LOC107565014,LOC107660599,LOC107602133 coding upstream 4515 19713485 ~ 19716443 (-)
asnsd1 asnsd1,LOC107728934,LOC107660596,LOC107714374 coding upstream 24930 19733900 ~ 19736121 (-)
LOC122352057 NA coding upstream 27063 19736033 ~ 19737211 (-)
wdr75 wdr75,LOC107660592,LOC107714378,LOC107728907,LOC107657531,LOC107602136,LOC107565028 coding upstream 41572 19750542 ~ 19766793 (-)
obsl1b obsl1b,obsl1,LOC107660652,LOC107602158,LOC107657519,LOC107728922,LOC107714352,LOC107584169,LOC108423904 coding upstream 288505 19997475 ~ 20029805 (-)
LOC122351289 NA non-coding downstream 3491 19674731 ~ 19681399 (-)
G71667 cunh2orf88,LOC107728910,LOC107657540,LOC107714370,LOC798500,LOC103027948 non-coding downstream 13726 19667000 ~ 19671164 (-)
G71587 NA non-coding downstream 141043 19458787 ~ 19543847 (-)
LOC122351304 NA non-coding downstream 159300 19519740 ~ 19525590 (-)
LOC122351387 NA non-coding downstream 176805 19496912 ~ 19508085 (-)
G71645 NA non-coding upstream 414 19709384 ~ 19712184 (-)
G71692 NA non-coding upstream 82277 19791247 ~ 19791560 (-)
G71727 NA non-coding upstream 178205 19887175 ~ 19941547 (-)
G71732 NA non-coding upstream 207229 19916199 ~ 19922691 (-)
G71912 LOC107602164,LOC107660650,LOC107728931 non-coding upstream 454153 20163123 ~ 20630423 (-)
LOC122352185 NA other downstream 1115008 18569755 ~ 18569882 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other downstream 1318623 18251236 ~ 18366267 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other downstream 2163330 17364187 ~ 17521560 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other downstream 2429399 17235872 ~ 17255491 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other downstream 2795343 16886753 ~ 16889547 (-)
ankar ankar,LOC107728908,LOC107660654 other upstream 10972 19719942 ~ 19731794 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other upstream 87282 19796252 ~ 19829475 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other upstream 124950 19833920 ~ 19852625 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other upstream 172580 19881550 ~ 19893315 (-)
G71938 nab1,LOC107565022 other upstream 780194 20489164 ~ 20503890 (-)

Expression


Co-expression Network