tmem198a (tmem198a,LOC107688741,LOC107716788,LOC107602903,LOC107551083,LOC107721592,LOC108423970,LOC107668403)


Basic Information

Item Value
gene id tmem198a
gene name tmem198a,LOC107688741,LOC107716788,LOC107602903,LOC107551083,LOC107721592,LOC108423970,LOC107668403
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 7271362 ~ 7291542 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249055.1
CAAAGACACAGAGCATgtgaatcaaaatgaaaacactgagTGCCATCAGATGATACaccagaaagaaagaaagcggaGGGACAGCCAACATGCAGGCGCGTGATGACACCGGACCAGTTTGAGAGCACCTGGACCTCTCGCTAATCATGTGAAACACTTGGTACTGCACGCTTCCCGTCGTGACACACCAGTTATCTCGTTAGATCGCAGACCGGATTCCGAGTGCTTCGGAATGGGGGAAAAAACCCTTCGCCACAAAGGATGCTGAAAGCGAGTTATCTGCGCTTCGCTGCGAGCGACTGAGCACGGATCTCGAGCTGTGACAACGGTAAATTGTTGTGGAGGGGAACCTTCTCTGCACTCCCTACCTTCCACATGACCCCACTTTCCCCGTTTCATCGGCTCCCGTGAAGATACGTAGCACTCTCTAATACACGCTGACAGCATGACGTCCACTGCCCAGATTCTGGCCTTTAAGCTCTCCCCACCCTCTCAGGATGGGAGTCCAGAGCGTCTGTTCAGCTGTGATGAGGACATTGAACGGCGCTATGAGGTGGTCCCGTCTGTCGTCTGCTCCATGTGTTGCCTGTTTGGCATCATCTACTGCTTCTTCGGGTACCGCTGCTTCAAGGCCGTGATGTTCCTCACGGGTCTGATGTTCGGTTCCATCATCATCTTCATGCTCTGCTATAAGGAGAGGGTCATGGATACTCAGCTCAGTGTGGAGGCCAGTGTGGGCATCGGCCTGGGCATTGGCACGTTGTGTGGTTTGGTCACTATGCTGGTCCGCAGCGTGGGGCTTTTCATGGTTGGACTTCTCCTGGGTTTACTGGTGGCCTTGGCCTCTCTTGTGGTTCTGGAGGAGTTTTATCACCCGAGGACAGTGTGGCTTCCCCTGGGTGTGCTGCTGGGCTCGGGCATGCTGTTTGCTGTGCTCACGTTGCAGTGGCAGCGCTGTTTCACCACCCTCTCCACCGCCGTCTTCGGATCAGCTGTGGTGACTGTGACTGTGGATTACTTTGTCGAGCTCTTCGCTCTGACACGCTACATCTATGAGAGGGTGAAGGTGGATCCGCCTCGGCCGGTGTGTTGGTTCACATGGGTGGTCATGGGAGTTTGGCCTGTGCTTGCACTGCTGGGTGTTCTTATTCAGTGGAAGGTCACGGCTGAAGGATATTCACACACTGAAGtcttcaTCAGTCACCAACAGAGACGAGTGCAGCTAATGCGAATTCGtcaaaaggaagaaagaagggaatgccgaaagaaaaagaagaaaaagccaCAGAAACAGCCGCCGCAGCAACAGAAGTACCACCACCCCCCTCAGACCAACCCTCATCCCCCAAACCCTCCTCCCAAACTCCAGCCTCCGGAGCCCACTCACCGCCGGAAACCCAACACCATCCGCCGCTTCGATGGAGATGTGCTTTCTCCAAGTTACATCCAGAACTTCCGCGACAGACGTACGGACAGGAGGGGCTATTCTCATGGCAGGTTGATTGGCGGCTCACATGTTGTAGATTTAGACTATGACTACGGCTCCCAAGTGCCCCTAACAGCCCATACAGGCCCCGCGGTGAGAGGTTGACCCCGCACCCTTTAATGAACAGGAATTGCACTGAACAAACCATTCCGAGAACTGAAAACTTTGTGGCCGGATCAGACCTAAGAGCATGCAATCACAATGGCTGACGGGACTTTCATACCTGAATCCATTTGCTGTattcccatgtttttttttttatgtggcaAATGGATTGTATGCCTACGAAACAATGCGTAACCACACTATGGCTCTGTTCTCTTGCATTTAACTCCATTATATATTGCTGAAGAtggttgtggtgtgtgtgtctgctccTTCGAGGCTCATCTTCCcataattagactgctgtttcACTCCGTCCGAGAAGAACGGTCTCATTACCACAGCAGAAGTTTTAAAGGAGATCCATTATGTTCATTCTGAACACGGGACCAAATACGGCCTTGGCTTTTATGCGACTAGACTGTCATAAAGCATGCATGGTTTCTGCCAGACAGACTATTCGTATATCCAGTTTACAGATTCAAGCTTCAATCCTCCTGACCTTTTAAAGATGTTTCAGATAACATTTGTGTTTACAGCACGGGCAGGGAGgtgtgtaacattttataatgtttcaaaTGGCTTTATCTGCTCTGCGTCAGGGCCTACACAAAATCTGTCAAATAGTGTACGGTGAACACAATCTCTGTTCAGTCTGAGCCTATTGCACAAGCATATGCTGAAATGTGCGTTTATCGTTAGCCAATGCATGTGGTGAAAGTGCCACCATTGCTTTTGTGTTGTAGATGTACActttaatctgtttttgtttttttttttctgtttatcgTTTAGTATCTAGAGACTGTTTGGGTGGCTCCTAGTTAAATCTCAGGGGCTGTGGCATCGAGAAGAGCCCTAACGATGTAACTGTGAACACTAAGGGGTTTTGTGTGAGTGATTTAAGTGTCCTTGCCTACAAGAGAGAGTTTTGAAAGGGATTAAAGAAAGATGCCTAAGACGGGTGGAAGAGATTTACAGTGGTGGACTTCTCAcagaaaaaagattttgtgtatttctgtgtgtgtagaAAGCATGAaagcgagagagggagagatatagagtgtgtgggtgtgtattttgtgttgtgtgtgtgtgtgtgtgtgtgtgtatggatgCGTGAAAGCATTTGTCATACTGTGAGCCTGCAGTAGATTGGCGGCAGGGTTAAGACTTAATTTCTGATTTACCTTCATGTTCGGATGCGGGGTGATTTCACACCTAGTTTCCTGTCTGTGTTTATCAGGGCTGTCGGAGCAATGAAGAGTCAAAGTCTAATCTTTTCCTCACTCTGAAGTAGTGAAAGGGCTCAAAGGCTTAAATTCCTCTCTGTTTACCATGTCTTTTAAAGTGACAGATTGGCTCTCTTGTAAATTTTTGTACATTGTCTGAATGTAAATATGCTTACATGCAATTCTGTATTATTACTAGTGctttgattaattttataatttctttttctctaaTCAGTGGTTACATTTGTGTGTTAAAGAACTGTCTTTTGAATTGTCCCATTGATAgtcatttgtaattataatttatttctaatttattagATTAAGACTTCAAGTGGAGctctatatgtaattaaattgatgttgaccattattattattatgattattatgattattctTGAGCATGTATTTGTACAGTACTGATAACCATAAATGTTGTGCTCCTGAAGTCAAGta
>XM_043249056.1
CAAAGACACAGAGCATgtgaatcaaaatgaaaacactgagTGCCATCAGATGATACaccagaaagaaagaaagcggaGGGACAGCCAACATGCAGGCGCGTGATGACACCGGACCAGTTTGAGAGCACCTGGACCTCTCGCTAATCATGTGAAACACTTGGTACTGCACGCTTCCCGTCGTGACACACCAGTTATCTCGTTAGATCGCAGACCGGATTCCGAGTGCTTCGGAATGGGGGAAAAAACCCTTCGCCACAAAGGATGCTGAAAGCGAGTTATCTGCGCTTCGCTGCGAGCGACTGAGCACGGATCTCGAGCTGTGACAACGatggatgaagGAAGCAGCAGTGCCCCTCAGAGATCCGTGTCTAATTGAGTCAGGCTGCAGCGCACCAAACAGTTCTGGCTCTGATTTGTGGGAGAGTGGAAGATGACGCccaaaaaagacagaaagattgAGATGATGTGATGCAAAGAACGAGTGGATTTGGGTATTGCAGAGAGAAGAACGCGTGATGATGGGCCAGAACGGGGAGATCGGAAAGAGGCTCGTATAGAGAGGTAAATTGTTGTGGAGGGGAACCTTCTCTGCACTCCCTACCTTCCACATGACCCCACTTTCCCCGTTTCATCGGCTCCCGTGAAGATACGTAGCACTCTCTAATACACGCTGACAGCATGACGTCCACTGCCCAGATTCTGGCCTTTAAGCTCTCCCCACCCTCTCAGGATGGGAGTCCAGAGCGTCTGTTCAGCTGTGATGAGGACATTGAACGGCGCTATGAGGTGGTCCCGTCTGTCGTCTGCTCCATGTGTTGCCTGTTTGGCATCATCTACTGCTTCTTCGGGTACCGCTGCTTCAAGGCCGTGATGTTCCTCACGGGTCTGATGTTCGGTTCCATCATCATCTTCATGCTCTGCTATAAGGAGAGGGTCATGGATACTCAGCTCAGTGTGGAGGCCAGTGTGGGCATCGGCCTGGGCATTGGCACGTTGTGTGGTTTGGTCACTATGCTGGTCCGCAGCGTGGGGCTTTTCATGGTTGGACTTCTCCTGGGTTTACTGGTGGCCTTGGCCTCTCTTGTGGTTCTGGAGGAGTTTTATCACCCGAGGACAGTGTGGCTTCCCCTGGGTGTGCTGCTGGGCTCGGGCATGCTGTTTGCTGTGCTCACGTTGCAGTGGCAGCGCTGTTTCACCACCCTCTCCACCGCCGTCTTCGGATCAGCTGTGGTGACTGTGACTGTGGATTACTTTGTCGAGCTCTTCGCTCTGACACGCTACATCTATGAGAGGGTGAAGGTGGATCCGCCTCGGCCGGTGTGTTGGTTCACATGGGTGGTCATGGGAGTTTGGCCTGTGCTTGCACTGCTGGGTGTTCTTATTCAGTGGAAGGTCACGGCTGAAGGATATTCACACACTGAAGtcttcaTCAGTCACCAACAGAGACGAGTGCAGCTAATGCGAATTCGtcaaaaggaagaaagaagggaatgccgaaagaaaaagaagaaaaagccaCAGAAACAGCCGCCGCAGCAACAGAAGTACCACCACCCCCCTCAGACCAACCCTCATCCCCCAAACCCTCCTCCCAAACTCCAGCCTCCGGAGCCCACTCACCGCCGGAAACCCAACACCATCCGCCGCTTCGATGGAGATGTGCTTTCTCCAAGTTACATCCAGAACTTCCGCGACAGACGTACGGACAGGAGGGGCTATTCTCATGGCAGGTTGATTGGCGGCTCACATGTTGTAGATTTAGACTATGACTACGGCTCCCAAGTGCCCCTAACAGCCCATACAGGCCCCGCGGTGAGAGGTTGACCCCGCACCCTTTAATGAACAGGAATTGCACTGAACAAACCATTCCGAGAACTGAAAACTTTGTGGCCGGATCAGACCTAAGAGCATGCAATCACAATGGCTGACGGGACTTTCATACCTGAATCCATTTGCTGTattcccatgtttttttttttatgtggcaAATGGATTGTATGCCTACGAAACAATGCGTAACCACACTATGGCTCTGTTCTCTTGCATTTAACTCCATTATATATTGCTGAAGAtggttgtggtgtgtgtgtctgctccTTCGAGGCTCATCTTCCcataattagactgctgtttcACTCCGTCCGAGAAGAACGGTCTCATTACCACAGCAGAAGTTTTAAAGGAGATCCATTATGTTCATTCTGAACACGGGACCAAATACGGCCTTGGCTTTTATGCGACTAGACTGTCATAAAGCATGCATGGTTTCTGCCAGACAGACTATTCGTATATCCAGTTTACAGATTCAAGCTTCAATCCTCCTGACCTTTTAAAGATGTTTCAGATAACATTTGTGTTTACAGCACGGGCAGGGAGgtgtgtaacattttataatgtttcaaaTGGCTTTATCTGCTCTGCGTCAGGGCCTACACAAAATCTGTCAAATAGTGTACGGTGAACACAATCTCTGTTCAGTCTGAGCCTATTGCACAAGCATATGCTGAAATGTGCGTTTATCGTTAGCCAATGCATGTGGTGAAAGTGCCACCATTGCTTTTGTGTTGTAGATGTACActttaatctgtttttgtttttttttttctgtttatcgTTTAGTATCTAGAGACTGTTTGGGTGGCTCCTAGTTAAATCTCAGGGGCTGTGGCATCGAGAAGAGCCCTAACGATGTAACTGTGAACACTAAGGGGTTTTGTGTGAGTGATTTAAGTGTCCTTGCCTACAAGAGAGAGTTTTGAAAGGGATTAAAGAAAGATGCCTAAGACGGGTGGAAGAGATTTACAGTGGTGGACTTCTCAcagaaaaaagattttgtgtatttctgtgtgtgtagaAAGCATGAaagcgagagagggagagatatagagtgtgtgggtgtgtattttgtgttgtgtgtgtgtgtgtgtgtgtgtgtatggatgCGTGAAAGCATTTGTCATACTGTGAGCCTGCAGTAGATTGGCGGCAGGGTTAAGACTTAATTTCTGATTTACCTTCATGTTCGGATGCGGGGTGATTTCACACCTAGTTTCCTGTCTGTGTTTATCAGGGCTGTCGGAGCAATGAAGAGTCAAAGTCTAATCTTTTCCTCACTCTGAAGTAGTGAAAGGGCTCAAAGGCTTAAATTCCTCTCTGTTTACCATGTCTTTTAAAGTGACAGATTGGCTCTCTTGTAAATTTTTGTACATTGTCTGAATGTAAATATGCTTACATGCAATTCTGTATTATTACTAGTGctttgattaattttataatttctttttctctaaTCAGTGGTTACATTTGTGTGTTAAAGAACTGTCTTTTGAATTGTCCCATTGATAgtcatttgtaattataatttatttctaatttattagATTAAGACTTCAAGTGGAGctctatatgtaattaaattgatgttgaccattattattattatgattattatgattattctTGAGCATGTATTTGTACAGTACTGATAACCATAAATGTTGTGCTCCTGAAGTCAAGta

Function

symbol description
tmem198a Predicted to be involved in positive regulation of canonical Wnt signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasmic vesicle and plasma membrane. Orthologous to human TMEM198 (transmembrane protein 198).

NR:

description
PREDICTED: transmembrane protein 198-B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249055.1 False 3285 mRNA 0.46 5 7271362 7291542
XM_043249056.1 True 3518 mRNA 0.47 6 7271362 7291542

Neighbor

gene id symbol gene type direction distance location
ihha ihha,LOC107716791,LOC107688738,LOC107721594,LOC107668405,LOC107551082,LOC107602904 coding upstream 23764 7241336 ~ 7247598 (+)
LOC122351345 si:dkey-4e7.3,LOC107688734,LOC107602908,LOC107716768 coding upstream 117396 7143119 ~ 7153966 (+)
LOC122351346 si:dkey-4e7.3,LOC107688734,LOC107602908,LOC107716768 coding upstream 117598 7149931 ~ 7153764 (+)
inpp4aa inpp4a,inpp4aa,LOC107676472,LOC107688733,LOC107602877,LOC107721597 coding upstream 128714 7117546 ~ 7142648 (+)
mfsd9 LOC107716769,LOC107688732,LOC107602885,LOC107551077,LOC107721579,LOC107676555 coding upstream 165000 7100429 ~ 7106362 (+)
ptprna ptprna,LOC107551086,LOC107688743,LOC107716786,LOC107602900,LOC107668387,LOC107721560 coding downstream 13298 7304840 ~ 7328592 (+)
mnx2a mnx2a,LOC107551068,LOC107688780,LOC107602884,LOC107716783,LOC107668369,LOC107721589 coding downstream 72422 7363964 ~ 7366993 (+)
cfap65 cfap65,LOC107688747,LOC107668360,LOC107716758,LOC107735777 coding downstream 76122 7367664 ~ 7380524 (+)
LOC122351251 LOC107716765,LOC107721581,LOC107551069,LOC107668359 coding downstream 89276 7380818 ~ 7383202 (+)
fn1a fn1a,LOC107716781,LOC107688749,LOC107668382,LOC107721590 coding downstream 112810 7404352 ~ 7430484 (+)
G68424 NA non-coding upstream 7649 7262541 ~ 7263713 (+)
G68401 NA non-coding upstream 11968 7256680 ~ 7259394 (+)
G68405 NA non-coding upstream 71545 7199269 ~ 7199817 (+)
G68309 NA non-coding upstream 275506 6991833 ~ 6995856 (+)
G68304 si:dkeyp-118h3.5,gpr45,LOC107602888,LOC107688775,LOC107716773,LOC107676540,LOC107721584,LOC107551066 non-coding upstream 296661 6963155 ~ 6974701 (+)
G68435 NA non-coding downstream 43949 7335491 ~ 7336359 (+)
G68446 NA non-coding downstream 561939 7853481 ~ 7854278 (+)
G68668 NA non-coding downstream 912311 8203853 ~ 8205963 (+)
G68678 NA non-coding downstream 931045 8222587 ~ 8222817 (+)
LOC122351403 NA non-coding downstream 1309182 8600724 ~ 8614984 (+)
LOC122351907 LOC107670338,LOC107721263 other upstream 1298239 5962884 ~ 5973123 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other upstream 1385609 5883927 ~ 5885753 (+)
trnam-cau_112 NA other upstream 1813833 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 1814099 5457191 ~ 5457263 (+)
trnam-cau_111 NA other upstream 1814519 5456772 ~ 5456843 (+)
si:ch211-167j6.3 NA other downstream 1049753 8341295 ~ 8342751 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 1139569 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 1169202 8460744 ~ 8506143 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other downstream 1571845 8863387 ~ 8866305 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other downstream 1575555 8867097 ~ 8871633 (+)

Expression


Co-expression Network