sf3b1 (sf3b1,LOC107731751,LOC107569635,LOC107659892,LOC107719800,LOC107595847,LOC107690614)


Basic Information

Item Value
gene id sf3b1
gene name sf3b1,LOC107731751,LOC107569635,LOC107659892,LOC107719800,LOC107595847,LOC107690614
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 15682700 ~ 15692615 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249076.1
CATGCGCCTTGTTTGTGCCGCAGGGGACGCGCCTGCGCGTTCTCGTGAGCGCAGCGGAGTCGGATGTGCAGTCAAAGGCCTTCCGGTACTGAGGTTCACACAACAGAAGGAAAATGGCGCAGATCGCCAAAACACATGACGacattGAGGCTCAGATCCTGGAAATCCAGGGGATGAAAGCTGCCCTGGTGGAGGGAGCAGAGCAGGGGGTTGGGCTCGATTCCACTGGATATTATGACCAAGAGATCTACGGAGGCAGCGATAGCCGCTTTGCTGGCTATGTGACATCGATTGCTGCCAATGAGCAGGAGGATgaTGATGAGGAAGATTCGTCCACGAGTCTGCTTGGACAGAAGAAACCAGGATACCATGCACCGGTTGCAATACTCAATTCCATTCCTCAATCAGATGAGCAGTACGATCCCTTTGCTGAACACCGACCACAGAAGATTTCAGACCGTGAGGATGAGTACAAGAAACGCAGACAAAAGATGATCATCTCCCCAGAGCGTCACGACCCATTTGCTGATGGGGGCAAAACGCCGGATCCCAAGATGCAGGTCAGGACATACATGGATGTTATGAAGGAGCAGCATCTGTCCAAAGAAGAGAGAGAGATCAGGCTGCAGATGGTAGAGAAAGCAAAGTCTGGAGAGCTGAAAGCAGTGAACGGCTCTGCTGCATCTCAGGCTGCTGGGGCCAAACGCAAACGACGCTGGGACCAGACAGCTGACCAAACCCCCAGTAATACCACACCCAGAAAAGTGTCCAGCTGGGACCAGGCAGATGCGGGTCCCGAAACACCAGGACACACACCTTCCAACAGTCGCTGGGATGAGACACCCGGGCGCCCCAAAGGTAGCGAGACCCCGGGAGCTACTCCAAGCACCCGTATGTGGGAACCCACACCAAGCCACACCCCAGCTGGAGCCGCAACACCAGGTCGAGACACTCCTGGACACGCCACTCCTGGCCACGGAGGGGCTACTTCCAGTGTGCGCAAGAACCGCTGGGATGAAACaccaaagacagagagagagacaCCTGGTCATGGCAGTGGCTGGGCTGAGACTCCACGTACAGACAGAGGAGATGAGTCAGTGGGTGAGACGCCCACCCCAGGTGCTAGCAAGAGGAAGTCAAGATGGGATGAGACACCAGCCAGTCAGATGGGCTCTTCAACTCCTCTGCTCACCCCTGGAAAAACCCCTCTGGGCACACCTGCTATGAATATGGCCACACCCACTCCAGGTCACCTGATGAGCATGACTCCAGAACAGCTGCAGGCTTGGCGCTGGGAGCGAGAGATTGACGAGAGGAATCGTCCACTGACTGATGAGGAGCTTGATGCCATGTTTCCAGAAGGATACAAAGTACTGCCACCACCAGCAGGCTATGTACCCATCCGTACCCCAGCACGTAAATTAGCTGCCACCCCCACCCCCATCGGAGGCATGACAGGCTTCCACATGCAAACAGAGGACCGATCTATGAAACAAGTCAACGATCAACCCTCTGGAAACCTGCCCTTCCTCAAGCCAGATGACATTCAGTACTTTGATAAACTGTTGGTCGAAGTTGATGAGTCCACCCTCAGTCCAGAAGAACAGAAGGAGCGCAAGATCATGAAGCTTCTCTTAAAGATCAAGAATGGGACACCTCCCATGAGAAAGGCTGCCCTCCGTCAAATCACAGACAAAGCCAGGGAGTTTGGTGCAGGACCACTCTTTAACCAGATCCTACCATTGCTGATGTCTCCTACACTGGAGGACCAGGAGCGTCATCTCTTGGTTAAAGTCATTGATCGTATCCTCTACAAACTTGATGACTTGGTTCGACCATATGTCCACAAGATTCTTGTGGTCATTGAACCCTTGCTGATTGATGAAGATTACTACGCTAGAGTAGAGGGTAGAGAGATCATCTCCAACTTGGCAAAAGCTGCTGGTCTGGCCACTATGATCTCCACCATGAGGCCTGATATTGACAACATGGACGAGTATGTGAGAAACACAACAGCTCGTGCTTTCGCTGTTGTAGCATCTGCCCTCGGCATTCCATCTCTCCTGCCTTTCCTCAAGGCTGTTTGCAAGAGCAAGAAATCCTGGCAGGCTCGTCACACGGGTATCAAGATCGTACAGCAGATCGCTATTCTCATGGGCTGTGCTATCCTGCCCCATCTCCGCAGCTTGGTGGAGATTATTGAGCATGgtCTCGTGGATGAGCAGCAGAAAGTGCGAACCATTAGTGCTCTGGCTATCGCTGCCCTGGCTGAAGCTGCTACACCATATGGTATCGAGTCCTTTGATTCTGTACTAAAACCTCTCTGGAAAGGTATCAGGCAACACAGAGGCAAGGGTCTTGCTGCCTTCTTGAAAGCCATTGGATACTTGATTCCTCTTATGGATGCTGAATATGCCAACTATTACACCAGAGAAGTGATGCTTATCCTTATTCGAGAGTTCCAGTCACCTGATGAGGAAATGAAGAAGATTGTCCTCaaggTGGTGAAGCAGTGCTGTGGCACAGATGGTGTGGAAgccaattacattaaaacagagATTTTGCCCCcctttttcaaacatttctggCAGCACCGAATGGCATTGGATAGGCGCAACTACAGACAGTTAGTGGACACTACAGTGGAGCTGGCCAATAAGGTCGGGGCAGCTGAGATTATTTCCCGCATCGTGGATGATTTAAAGGATGAAGCTGAGCAGTACAGAAAAATGGTCATGGAGACTATTGAGAAAATTATGGGAAACCTTGGTGCCGCTGACATCGATCACAAACTGGAGGAGCAGCTTATTGATGGAATCCTGTACGCTTTTCAGGAACAGACCACTGAAGACTCTGTGATGCTAAATGGCTTCGGTACGGTGGTAAATGCTCTGGGTAAGAGAGTAAAACCGTACTTGCCTCAGATCTGCGGTACAGTGCTGTGGCGTCTCAACAACAAATCCGCCAAAGTCCGTCAACAGGCTGCTGACCTGATTTCTCGCACAGCGGTGGTCATGAAGACATGCCAGGAGgAAAAGCTGATGGGCCATTTGGGTGTGGTGTTATACGAGTATCTGGGAGAAGAATACCCAGAAGTGCTGGGTAGCATTCTTGGAGCCCTTAAAGCTATTGTCAATGTTATTGGTATGCACAAGATGACACCACCTATCAAAGACTTGCTTCCACGATTGACTCCCATCTTAAAGAACAGACATGAGAAGGTGCAGGAGAACTGCATTGATCTAGTGGGCAGAATCGCTGATAGGGGTGCAGAGTATGTGTCTGCCAGGGAATGGATGCGCATCTGTTTTGAATTGCTGGAGTTGTTGAAAGCCCACAAGAAGGCCATTCGCAGAGCTACTGTCAATACTTTCGGCTACATCGCCAAGGCCATTGGTCCTCACGATGTGCTGGCCACGCTGCTCAACAATCTGAAGGTTCAGGAGCGTCAGAACCGTGTGTGCACAACGGTAGCCATTGCTATCGTGGCTGAGACGTGTTCGCCATTCACCGTGCTTCCTGCGTTGATGAACGAATACCGTGTTCCTGAACTTAATGTTCAGAATGGTGTCCTAAAGTCTTTGTCCTTCCTGTTCGAGTACATTGGTGAAATGGGTAAAGATTATATCTATGCGGTCACACCTTTGTTGGAGGATGCTCTGATGGACAGGGATCTTGTACACAGGCAGACTGCCAGTGCTGTGGTGCAGCATATGTCTCTGGGAGTGTATGGCTTTGGCTGTGAAGATTCTCTCAATCATTTGCTCAACTATGTTTGGCCAAATGTCTTTGAAACGTCTCCTCACGTCATCCAGGCTGTCATGGGGGCCCTAGAGGGTCTGCGGGTAGCAATCGGGCCCTGCCGGATGCTGCAGTACTGCTTGCAGGGGTTGTTCCATCCTGCTCGTAAAGTGCGTGACGTGTACTGGAAGATCTACAACTCCATCTACATTGGCTCCCAGGATGCACTGATCGCACATTATCCGCTTGTCTACAATGATGAGAAGAACTCGTATGTTCGCTATGAGCTGGAGTACTTCCTGTGAATATAACTACCCTTACATGtgcactctctcttttctcctaTATCTGTCTAATTCATGGTTTATAGGACTTggtccactttttttttatgttccctGGTAGGTTACAACCAGTACCACAGATTCTGCGGTCTaaaatttatttcttattaaagaacagaaaaatgtcgaaaaaaagaatgttaaaCGTGATGCTTTTAGGTCTTTGGATTagacttttctgtttttacagcGTGGCACCATGcacagtgacagtaaagatagtAGCAGAGTTTCTGAGGAATGTGATTTATCTTCAGTAAATCTTTTAACTAGAGACTTGTGTCCTGATCTGTCAAGTCCACTCTCTTGCTCAGTCACACATCTGTTCTTATAATGTTGCTTAGTTTGGCTGAATAAACATTTGTGTATTAAAAGTCA
>XM_043249077.1
GTGACGTTCCTGTCCAGACCATTTTTGGTTAACCCTTCGAACACCACCCAACAACTTGCTCCCTGGATTCAACTGACCTGTAAGATACAAATCTTTTAATGGGATGTGCTGAGAGCCAGTTATTCCTTGATTCAGAGATGTAAATGAGTTGGGCAGCAAAGGTTTTGGGAGACAGTTGGTTGGGTGGTGTCATTTGTCCCAACAGAACATAGGTTGCAGGTAGGTGTGTTGTTCGAAGGGTTAATGTACTTTGTGTGTGAAACAGAGAATACGATAGTCAGACACCTCAAACAgacactctttcttttctttttttttagtttaataatgCCAGAGGTTGCAGTGCACTTTGTGCAATTACTGTcagttttcttttcactttcgTCTTGTTCTATATTATACGCAACATTTATCCAATGGCATGTTGGCTAGACACCCAAGATGTGTCaaagtaatattttcaaaaggAGTGGAACTCTTAATAATCCTGATCCACCTTTTAACACACTTTACAATTTACTGTGCATATGGTTTAGTCTGTTACAAATTGTATCGACGGAGATATTGaacatctaataaaaaaatttccagcCATTTTAGTTTCTTTAAACCTATGGCCTGTGGGTGCTCATACTGGTACAAATTAGCAAGGAGTTTAGGAACTTCAGAATATGTTGCAACAGGCTGCACACACTCAAACTGCACCAGATCGGGTCAGGTTATGGGAAGGAATTGATTCTGGATCAAACAAAAGATCTTGCATGTAGTCCCTGACAGAGGAAGCTTTACGAAACtgttgtgtaaatatatttctattttataatcataaaatagaaatatatctATTTGAAGAATCTGTGTACCAAGATTCCACAGGCCCATACTAACTGTCCTTAATTTCTCTCCTACAGCAGTACTGCTATGCCAGTCCTGTCTGCACTCTCTTAAGGGTGCAGCAACTCGTCCTGTGTAGGTTATGGTCAACAAAAAGCAGCGTGTTTATCAGATAAATCAAGACCGTAGTTGGTAGTTTTGCTCTGGTGTCAGACCAGAGGGTCTTTCAGGGGAATCTACCATGGTTTCactaaacgttttttttctgttgttctttTACTGTTatgaagttatttatttatttttttaagcctcATCAAGGACAATTTTCTCTTCAACTTCATGTCCTCCCTTCtcattttaacttttcattCCAATCCAttgtagatatttttttcaaattaaaacatatgCACAAGTATGCACGTGCATTGCAAGTACttaatttttcagatttaaatgtagtttttaaagagtttattaGAAATTCCCCAAAGTGTTCAGTGTCTCTGGCTGCAACACATTTAGTaccataaatgataaaaaaaaaaaaaatttgcaaagtcgagggttttttttggtttttttacaaGAGCAGAACAGGTGGTAtgctattgtgtgtgtgagttcaaACCCTTTTCCAAAGTGTTACTAATGGTAAAGAGAAATTTTCTAGGCTTCTTTTCTGCCGGTTGAAGTCTGACTGCAGAGGGACCCTTGGCACTGAAAGTGGGGCAAAACGCCGGATCCCAAGATGCAGGTCAGGACATACATGGATGTTATGAAGGAGCAGCATCTGTCCAAAGAAGAGAGAGAGATCAGGCTGCAGATGGTAGAGAAAGCAAAGTCTGGAGAGCTGAAAGCAGTGAACGGCTCTGCTGCATCTCAGGCTGCTGGGGCCAAACGCAAACGACGCTGGGACCAGACAGCTGACCAAACCCCCAGTAATACCACACCCAGAAAAGTGTCCAGCTGGGACCAGGCAGATGCGGGTCCCGAAACACCAGGACACACACCTTCCAACAGTCGCTGGGATGAGACACCCGGGCGCCCCAAAGGTAGCGAGACCCCGGGAGCTACTCCAAGCACCCGTATGTGGGAACCCACACCAAGCCACACCCCAGCTGGAGCCGCAACACCAGGTCGAGACACTCCTGGACACGCCACTCCTGGCCACGGAGGGGCTACTTCCAGTGTGCGCAAGAACCGCTGGGATGAAACaccaaagacagagagagagacaCCTGGTCATGGCAGTGGCTGGGCTGAGACTCCACGTACAGACAGAGGAGATGAGTCAGTGGGTGAGACGCCCACCCCAGGTGCTAGCAAGAGGAAGTCAAGATGGGATGAGACACCAGCCAGTCAGATGGGCTCTTCAACTCCTCTGCTCACCCCTGGAAAAACCCCTCTGGGCACACCTGCTATGAATATGGCCACACCCACTCCAGGTCACCTGATGAGCATGACTCCAGAACAGCTGCAGGCTTGGCGCTGGGAGCGAGAGATTGACGAGAGGAATCGTCCACTGACTGATGAGGAGCTTGATGCCATGTTTCCAGAAGGATACAAAGTACTGCCACCACCAGCAGGCTATGTACCCATCCGTACCCCAGCACGTAAATTAGCTGCCACCCCCACCCCCATCGGAGGCATGACAGGCTTCCACATGCAAACAGAGGACCGATCTATGAAACAAGTCAACGATCAACCCTCTGGAAACCTGCCCTTCCTCAAGCCAGATGACATTCAGTACTTTGATAAACTGTTGGTCGAAGTTGATGAGTCCACCCTCAGTCCAGAAGAACAGAAGGAGCGCAAGATCATGAAGCTTCTCTTAAAGATCAAGAATGGGACACCTCCCATGAGAAAGGCTGCCCTCCGTCAAATCACAGACAAAGCCAGGGAGTTTGGTGCAGGACCACTCTTTAACCAGATCCTACCATTGCTGATGTCTCCTACACTGGAGGACCAGGAGCGTCATCTCTTGGTTAAAGTCATTGATCGTATCCTCTACAAACTTGATGACTTGGTTCGACCATATGTCCACAAGATTCTTGTGGTCATTGAACCCTTGCTGATTGATGAAGATTACTACGCTAGAGTAGAGGGTAGAGAGATCATCTCCAACTTGGCAAAAGCTGCTGGTCTGGCCACTATGATCTCCACCATGAGGCCTGATATTGACAACATGGACGAGTATGTGAGAAACACAACAGCTCGTGCTTTCGCTGTTGTAGCATCTGCCCTCGGCATTCCATCTCTCCTGCCTTTCCTCAAGGCTGTTTGCAAGAGCAAGAAATCCTGGCAGGCTCGTCACACGGGTATCAAGATCGTACAGCAGATCGCTATTCTCATGGGCTGTGCTATCCTGCCCCATCTCCGCAGCTTGGTGGAGATTATTGAGCATGgtCTCGTGGATGAGCAGCAGAAAGTGCGAACCATTAGTGCTCTGGCTATCGCTGCCCTGGCTGAAGCTGCTACACCATATGGTATCGAGTCCTTTGATTCTGTACTAAAACCTCTCTGGAAAGGTATCAGGCAACACAGAGGCAAGGGTCTTGCTGCCTTCTTGAAAGCCATTGGATACTTGATTCCTCTTATGGATGCTGAATATGCCAACTATTACACCAGAGAAGTGATGCTTATCCTTATTCGAGAGTTCCAGTCACCTGATGAGGAAATGAAGAAGATTGTCCTCaaggTGGTGAAGCAGTGCTGTGGCACAGATGGTGTGGAAgccaattacattaaaacagagATTTTGCCCCcctttttcaaacatttctggCAGCACCGAATGGCATTGGATAGGCGCAACTACAGACAGTTAGTGGACACTACAGTGGAGCTGGCCAATAAGGTCGGGGCAGCTGAGATTATTTCCCGCATCGTGGATGATTTAAAGGATGAAGCTGAGCAGTACAGAAAAATGGTCATGGAGACTATTGAGAAAATTATGGGAAACCTTGGTGCCGCTGACATCGATCACAAACTGGAGGAGCAGCTTATTGATGGAATCCTGTACGCTTTTCAGGAACAGACCACTGAAGACTCTGTGATGCTAAATGGCTTCGGTACGGTGGTAAATGCTCTGGGTAAGAGAGTAAAACCGTACTTGCCTCAGATCTGCGGTACAGTGCTGTGGCGTCTCAACAACAAATCCGCCAAAGTCCGTCAACAGGCTGCTGACCTGATTTCTCGCACAGCGGTGGTCATGAAGACATGCCAGGAGgAAAAGCTGATGGGCCATTTGGGTGTGGTGTTATACGAGTATCTGGGAGAAGAATACCCAGAAGTGCTGGGTAGCATTCTTGGAGCCCTTAAAGCTATTGTCAATGTTATTGGTATGCACAAGATGACACCACCTATCAAAGACTTGCTTCCACGATTGACTCCCATCTTAAAGAACAGACATGAGAAGGTGCAGGAGAACTGCATTGATCTAGTGGGCAGAATCGCTGATAGGGGTGCAGAGTATGTGTCTGCCAGGGAATGGATGCGCATCTGTTTTGAATTGCTGGAGTTGTTGAAAGCCCACAAGAAGGCCATTCGCAGAGCTACTGTCAATACTTTCGGCTACATCGCCAAGGCCATTGGTCCTCACGATGTGCTGGCCACGCTGCTCAACAATCTGAAGGTTCAGGAGCGTCAGAACCGTGTGTGCACAACGGTAGCCATTGCTATCGTGGCTGAGACGTGTTCGCCATTCACCGTGCTTCCTGCGTTGATGAACGAATACCGTGTTCCTGAACTTAATGTTCAGAATGGTGTCCTAAAGTCTTTGTCCTTCCTGTTCGAGTACATTGGTGAAATGGGTAAAGATTATATCTATGCGGTCACACCTTTGTTGGAGGATGCTCTGATGGACAGGGATCTTGTACACAGGCAGACTGCCAGTGCTGTGGTGCAGCATATGTCTCTGGGAGTGTATGGCTTTGGCTGTGAAGATTCTCTCAATCATTTGCTCAACTATGTTTGGCCAAATGTCTTTGAAACGTCTCCTCACGTCATCCAGGCTGTCATGGGGGCCCTAGAGGGTCTGCGGGTAGCAATCGGGCCCTGCCGGATGCTGCAGTACTGCTTGCAGGGGTTGTTCCATCCTGCTCGTAAAGTGCGTGACGTGTACTGGAAGATCTACAACTCCATCTACATTGGCTCCCAGGATGCACTGATCGCACATTATCCGCTTGTCTACAATGATGAGAAGAACTCGTATGTTCGCTATGAGCTGGAGTACTTCCTGTGAATATAACTACCCTTACATGtgcactctctcttttctcctaTATCTGTCTAATTCATGGTTTATAGGACTTggtccactttttttttatgttccctGGTAGGTTACAACCAGTACCACAGATTCTGCGGTCTaaaatttatttcttattaaagaacagaaaaatgtcgaaaaaaagaatgttaaaCGTGATGCTTTTAGGTCTTTGGATTagacttttctgtttttacagcGTGGCACCATGcacagtgacagtaaagatagtAGCAGAGTTTCTGAGGAATGTGATTTATCTTCAGTAAATCTTTTAACTAGAGACTTGTGTCCTGATCTGTCAAGTCCACTCTCTTGCTCAGTCACACATCTGTTCTTATAATGTTGCTTAGTTTGGCTGAATAAACATTTGTGTATTAAAAGTCA
>XM_043249078.1
GACCGTGAGGATGAGTACAAGAAACGCAGACAAAAGATGATCATCTCCCCAGAGCGTCACGACCCATTTGCTGATGGCTTCTTTTCTGCCGGTTGAAGTCTGACTGCAGAGGGACCCTTGGCACTGAAAGTGGGGCAAAACGCCGGATCCCAAGATGCAGGTCAGGACATACATGGATGTTATGAAGGAGCAGCATCTGTCCAAAGAAGAGAGAGAGATCAGGCTGCAGATGGTAGAGAAAGCAAAGTCTGGAGAGCTGAAAGCAGTGAACGGCTCTGCTGCATCTCAGGCTGCTGGGGCCAAACGCAAACGACGCTGGGACCAGACAGCTGACCAAACCCCCAGTAATACCACACCCAGAAAAGTGTCCAGCTGGGACCAGGCAGATGCGGGTCCCGAAACACCAGGACACACACCTTCCAACAGTCGCTGGGATGAGACACCCGGGCGCCCCAAAGGTAGCGAGACCCCGGGAGCTACTCCAAGCACCCGTATGTGGGAACCCACACCAAGCCACACCCCAGCTGGAGCCGCAACACCAGGTCGAGACACTCCTGGACACGCCACTCCTGGCCACGGAGGGGCTACTTCCAGTGTGCGCAAGAACCGCTGGGATGAAACaccaaagacagagagagagacaCCTGGTCATGGCAGTGGCTGGGCTGAGACTCCACGTACAGACAGAGGAGATGAGTCAGTGGGTGAGACGCCCACCCCAGGTGCTAGCAAGAGGAAGTCAAGATGGGATGAGACACCAGCCAGTCAGATGGGCTCTTCAACTCCTCTGCTCACCCCTGGAAAAACCCCTCTGGGCACACCTGCTATGAATATGGCCACACCCACTCCAGGTCACCTGATGAGCATGACTCCAGAACAGCTGCAGGCTTGGCGCTGGGAGCGAGAGATTGACGAGAGGAATCGTCCACTGACTGATGAGGAGCTTGATGCCATGTTTCCAGAAGGATACAAAGTACTGCCACCACCAGCAGGCTATGTACCCATCCGTACCCCAGCACGTAAATTAGCTGCCACCCCCACCCCCATCGGAGGCATGACAGGCTTCCACATGCAAACAGAGGACCGATCTATGAAACAAGTCAACGATCAACCCTCTGGAAACCTGCCCTTCCTCAAGCCAGATGACATTCAGTACTTTGATAAACTGTTGGTCGAAGTTGATGAGTCCACCCTCAGTCCAGAAGAACAGAAGGAGCGCAAGATCATGAAGCTTCTCTTAAAGATCAAGAATGGGACACCTCCCATGAGAAAGGCTGCCCTCCGTCAAATCACAGACAAAGCCAGGGAGTTTGGTGCAGGACCACTCTTTAACCAGATCCTACCATTGCTGATGTCTCCTACACTGGAGGACCAGGAGCGTCATCTCTTGGTTAAAGTCATTGATCGTATCCTCTACAAACTTGATGACTTGGTTCGACCATATGTCCACAAGATTCTTGTGGTCATTGAACCCTTGCTGATTGATGAAGATTACTACGCTAGAGTAGAGGGTAGAGAGATCATCTCCAACTTGGCAAAAGCTGCTGGTCTGGCCACTATGATCTCCACCATGAGGCCTGATATTGACAACATGGACGAGTATGTGAGAAACACAACAGCTCGTGCTTTCGCTGTTGTAGCATCTGCCCTCGGCATTCCATCTCTCCTGCCTTTCCTCAAGGCTGTTTGCAAGAGCAAGAAATCCTGGCAGGCTCGTCACACGGGTATCAAGATCGTACAGCAGATCGCTATTCTCATGGGCTGTGCTATCCTGCCCCATCTCCGCAGCTTGGTGGAGATTATTGAGCATGgtCTCGTGGATGAGCAGCAGAAAGTGCGAACCATTAGTGCTCTGGCTATCGCTGCCCTGGCTGAAGCTGCTACACCATATGGTATCGAGTCCTTTGATTCTGTACTAAAACCTCTCTGGAAAGGTATCAGGCAACACAGAGGCAAGGGTCTTGCTGCCTTCTTGAAAGCCATTGGATACTTGATTCCTCTTATGGATGCTGAATATGCCAACTATTACACCAGAGAAGTGATGCTTATCCTTATTCGAGAGTTCCAGTCACCTGATGAGGAAATGAAGAAGATTGTCCTCaaggTGGTGAAGCAGTGCTGTGGCACAGATGGTGTGGAAgccaattacattaaaacagagATTTTGCCCCcctttttcaaacatttctggCAGCACCGAATGGCATTGGATAGGCGCAACTACAGACAGTTAGTGGACACTACAGTGGAGCTGGCCAATAAGGTCGGGGCAGCTGAGATTATTTCCCGCATCGTGGATGATTTAAAGGATGAAGCTGAGCAGTACAGAAAAATGGTCATGGAGACTATTGAGAAAATTATGGGAAACCTTGGTGCCGCTGACATCGATCACAAACTGGAGGAGCAGCTTATTGATGGAATCCTGTACGCTTTTCAGGAACAGACCACTGAAGACTCTGTGATGCTAAATGGCTTCGGTACGGTGGTAAATGCTCTGGGTAAGAGAGTAAAACCGTACTTGCCTCAGATCTGCGGTACAGTGCTGTGGCGTCTCAACAACAAATCCGCCAAAGTCCGTCAACAGGCTGCTGACCTGATTTCTCGCACAGCGGTGGTCATGAAGACATGCCAGGAGgAAAAGCTGATGGGCCATTTGGGTGTGGTGTTATACGAGTATCTGGGAGAAGAATACCCAGAAGTGCTGGGTAGCATTCTTGGAGCCCTTAAAGCTATTGTCAATGTTATTGGTATGCACAAGATGACACCACCTATCAAAGACTTGCTTCCACGATTGACTCCCATCTTAAAGAACAGACATGAGAAGGTGCAGGAGAACTGCATTGATCTAGTGGGCAGAATCGCTGATAGGGGTGCAGAGTATGTGTCTGCCAGGGAATGGATGCGCATCTGTTTTGAATTGCTGGAGTTGTTGAAAGCCCACAAGAAGGCCATTCGCAGAGCTACTGTCAATACTTTCGGCTACATCGCCAAGGCCATTGGTCCTCACGATGTGCTGGCCACGCTGCTCAACAATCTGAAGGTTCAGGAGCGTCAGAACCGTGTGTGCACAACGGTAGCCATTGCTATCGTGGCTGAGACGTGTTCGCCATTCACCGTGCTTCCTGCGTTGATGAACGAATACCGTGTTCCTGAACTTAATGTTCAGAATGGTGTCCTAAAGTCTTTGTCCTTCCTGTTCGAGTACATTGGTGAAATGGGTAAAGATTATATCTATGCGGTCACACCTTTGTTGGAGGATGCTCTGATGGACAGGGATCTTGTACACAGGCAGACTGCCAGTGCTGTGGTGCAGCATATGTCTCTGGGAGTGTATGGCTTTGGCTGTGAAGATTCTCTCAATCATTTGCTCAACTATGTTTGGCCAAATGTCTTTGAAACGTCTCCTCACGTCATCCAGGCTGTCATGGGGGCCCTAGAGGGTCTGCGGGTAGCAATCGGGCCCTGCCGGATGCTGCAGTACTGCTTGCAGGGGTTGTTCCATCCTGCTCGTAAAGTGCGTGACGTGTACTGGAAGATCTACAACTCCATCTACATTGGCTCCCAGGATGCACTGATCGCACATTATCCGCTTGTCTACAATGATGAGAAGAACTCGTATGTTCGCTATGAGCTGGAGTACTTCCTGTGAATATAACTACCCTTACATGtgcactctctcttttctcctaTATCTGTCTAATTCATGGTTTATAGGACTTggtccactttttttttatgttccctGGTAGGTTACAACCAGTACCACAGATTCTGCGGTCTaaaatttatttcttattaaagaacagaaaaatgtcgaaaaaaagaatgttaaaCGTGATGCTTTTAGGTCTTTGGATTagacttttctgtttttacagcGTGGCACCATGcacagtgacagtaaagatagtAGCAGAGTTTCTGAGGAATGTGATTTATCTTCAGTAAATCTTTTAACTAGAGACTTGTGTCCTGATCTGTCAAGTCCACTCTCTTGCTCAGTCACACATCTGTTCTTATAATGTTGCTTAGTTTGGCTGAATAAACATTTGTGTATTAAAAGTCA

Function

symbol description
sf3b1 Predicted to enable mRNA binding activity. Acts upstream of or within several processes, including hemopoiesis; melanocyte differentiation; and neural crest cell development. Predicted to be located in nucleus. Predicted to be part of U2 snRNP and spliceosomal complex. Is expressed in brain; neural tube; and trunk. Human ortholog(s) of this gene implicated in hepatocellular carcinoma and myelodysplastic syndrome. Orthologous to human SF3B1 (splicing factor 3b subunit 1).

NR:

description
PREDICTED: splicing factor 3B subunit 1 isoform X1

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process
GO:0014032 neural crest cell development biological_process
GO:0030318 melanocyte differentiation biological_process

KEGG:

id description
K12828 SF3B1, SAP155; splicing factor 3B subunit 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249076.1 False 4466 mRNA 0.50 25 15682700 15692615
XM_043249077.1 True 5500 mRNA 0.46 22 15682700 15691141
XM_043249078.1 False 4066 mRNA 0.49 23 15682700 15691284

Neighbor

gene id symbol gene type direction distance location
ankrd44 ankrd44,LOC107719801,LOC107659898,LOC107595853 coding downstream 1861 15657514 ~ 15680839 (-)
fgf14 fgf14,LOC107569606,LOC107600372,LOC107681314,LOC107690615 coding downstream 55909 15525358 ~ 15626791 (-)
nalcn nalcn coding downstream 192455 15425447 ~ 15490245 (-)
zic5 zic5,LOC107569541,LOC107694589,LOC107740913,LOC107748614,LOC107681322,LOC107600378 coding downstream 415181 15263879 ~ 15267519 (-)
si:ch211-184m13.4 LOC107668872,LOC107748619,LOC107569521,LOC107740921,LOC107600422,LOC107681312 coding downstream 501023 15179474 ~ 15181677 (-)
hspd1 hspd1,LOC107569661,LOC107690611,LOC107659893,LOC107595848 coding upstream 9300 15701915 ~ 15707664 (-)
rftn2 rftn2,LOC107690607,LOC107731757,LOC107719806,LOC107595849,LOC107569700 coding upstream 23707 15716322 ~ 15728800 (-)
satb2 satb2,LOC107731767,LOC107690605,LOC107569722,LOC107595845,LOC107659884,LOC107719815 coding upstream 141924 15834539 ~ 15876097 (-)
dnajb11 dnajb11,LOC107595843,LOC107690604,LOC107719809,LOC107659888,LOC107731764,LOC107569729 coding upstream 201507 15894122 ~ 15899152 (-)
LOC122351158 LOC107690624,LOC107595883 coding upstream 209732 15902347 ~ 15904183 (-)
G70633 pikfyve,LOC107719798,LOC107681306,LOC107731754 non-coding downstream 38424 15642259 ~ 15644276 (-)
LOC122351574 NA non-coding downstream 44264 15628883 ~ 15638436 (-)
G70581 NA non-coding downstream 261123 15418999 ~ 15421577 (-)
LOC122351294 NA non-coding downstream 420024 15256988 ~ 15262676 (-)
LOC122351681 dach1,LOC107668899 non-coding downstream 640970 15034819 ~ 15041730 (-)
G70660 NA non-coding upstream 69768 15762383 ~ 15762669 (-)
LOC122352066 NA non-coding upstream 255498 15948113 ~ 15953976 (-)
G70894 NA non-coding upstream 425667 16118282 ~ 16120319 (-)
LOC122351188 NA non-coding upstream 912752 16605367 ~ 16631420 (-)
G70955 NA non-coding upstream 917655 16610270 ~ 16610561 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other downstream 283263 15389218 ~ 15399437 (-)
G70549 NA other downstream 376725 15303103 ~ 15305975 (-)
LOC122351495 NA other downstream 1310026 14359646 ~ 14372674 (-)
G70317 NA other downstream 1428924 14196479 ~ 14253776 (-)
G70294 NA other downstream 1742832 13938259 ~ 13939868 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other upstream 78806 15771421 ~ 15771864 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other upstream 1028189 16720804 ~ 16746222 (-)
G70986 pou2f1b,LOC107748141 other upstream 1124525 16817140 ~ 16823775 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other upstream 1194138 16886753 ~ 16889547 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other upstream 1543257 17235872 ~ 17255491 (-)

Expression


Co-expression Network