serpine3 (serpine3,LOC107555035,LOC107567776,LOC107725220,LOC107695567)


Basic Information

Item Value
gene id serpine3
gene name serpine3,LOC107555035,LOC107567776,LOC107725220,LOC107695567
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13386660 ~ 13400112 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249086.1
cacatttatcatataaattagatcattataaatacagacatgtaaatactttttcaaaatgtatacttttcaaaatgaatgcatttatatataaataataaatacacagaacgCAGACATTTATTGTACagccaacattttttttcttttgtatgcgattaatcacgatcaatataaatatattttaagaagaaaacaatttttaacaatatttcacagttttgctgttttgcaGCCCATTGAGTGTCATACTCCATtccagtcaatcaatcaatcaatcagtcaattaAGCTATGAATGGTTGATGTTAAGCGCTTGGCAAAGCTCACACCTTGGCATTGATTACATGagaatttgaaatgtttaatggCATCTCATGCAGAAATGCTGATGCAGCATGTTACCCTGTGTTATAGCTGCATGGCATTTGCTCATTCTATCAAAAGAACAAGCTGCTTGTGTAATGACTTCCTCTCtctattatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggctgtcgAGTGCGGATTTGCTGGTCGAGCGCATGCCTCCCTCTGCCTGGCTCCTTATAGTGCCGGGCGGGAGGCAGGAATTCTGACCGAGTGGTACGGACATCGCCGCCGGTGACCACAAACACGAAGCTCTCCCTTTAAACAAGGTCTCATGATCGACAACTCTTTCAATCAGTTGTCTTGGCGTGGAGGATCAGGGCGAACGCACGTCCTGCTGGAGTGACAGTGATAGTGGAGCTGAACATCAGGAGCAGCTGACACTCACACAATCCAGAGATCTTGACCTGTTGATCATGCATCAGCTGTCTGTGACTTCGCTGTTGCTATGTCTGTGGCTGCTGGAGcgctgccatggcaacagccTCAATGATCTACACACACAGTTTGGAGTCAGCCTCTACCAAACACTCACAGAGACGGAGAACAACTCCAACCTGATCGTGTCTCCAGCCAGCGTCTCGTTGTGTCTTGGTCTTCTTCAGCTCGGTGCCAGGGGAAACACTCTAGCACAACTCGAGGAAACTCTGGGATATGACGTGAATGATGCTCGAGTGCAGGACATTTTGTCTCGCCCACAAGGAGACCTGGGTAATTCCAGTGAAGGGGTACAGCTTCAGCTTGCCAATGCCTTATTTGTCCAGAGTGGTGTGAAACTCCTGCCAGAATTTACCCAGCATGCCTTGGGATGGGGTAACAGTAGTCTACTGAGTGTAAACTTCAGTAATCCAAACCACACTCATAGTCGGCTACAGCAGTGGACACGTTCCCAGAGTAAAGctGATGACCATCTCCAGACAAAAGAGGAACAGCTTCCGTCCCAGGAAGAGGCCTCCAGGCAAGACAGTTTACTGCACATGGCTCTTCTGAGCACGGTGGTGTTTCACGGTGCCTGGCAGAAACAATTTCTCTTCACTGACACTCAGAACCTGCCCTTCAGCCTCTCAGACGGCAGCACAGTCAAAGTCCCGATGATGTACCAGTCAACCGGAGTCAATATTGGTCATTTCCGCCTGCCGTCTGAGCAGGAGTACACTGTGCTGGAGCTTCCGTACTTAGATCGCTCACTCAGGCTACTGGTGGCCTTACCTAGTGACCGGAAAACCTCTCTGTCCCAGCTGGAAAAGCAGCTCACTTCCCATTCTGTGGGACTGTGGGATACTGCATTAAGACGCACTAAAATGGATATATTTCTGCCCAGGTTTAAGATGCAGAGCAGGTTCAATCTGAAGCCCGTTTTACAGTCTCTCGGTATCTCTGATGTCTTCAGTCCGTCAGCTGCTGATTTTAGAGGCATCTCAGACGGAGAAGGGCTTTTTGTGTCAGAGGCTTTCCATGAGGCAAGAATAGAAGTGACCGAGGAAGGGACAAAAGCAGCTTCAGCTACAGCAATGGTGCTTTTGAAAAGATCCCGTTCAGCGGTTTTCAAAGCAGATCGACCGTTTCTCTTCATCTTACGGCAGATTAGTACAGGGTCATTGTTGTTTATAGGTCGAGTTCTGAATCCAGCCGAGATGTCTTGAGATGACGCACGCAATCACGACTGCTTCaaatgacaaacacacaggagACTTGTTTTAATATACACTTGTATGATTTTGCCAACTCCACACCCCCCTCCTCCCTCATGGGTGGGGGGTCAGAGGGATATCTGAGGACCGTAAGGAGGGTCCACTGACGCTTCAGGAAGAGGGACGAGACTTTTGTACAtatctgtaaataaaattttattacatcagggtttttgca
>XM_043249087.1
acacatttatcatataaattagatcattataaatacagacatgtaaatactttttcaaaatgtatacttttcaaaatgaatgcatttatatataaataataaatacacagaacgCAGACATTTATTGTACagccaacattttttttcttttgtatgcgattaatcacgatcaatataaatatattttaagaagaaaacaatttttaacaatatttcacagttttgctgttttgcaGCCCATTGAGTGTCATACTCCATtccagtcaatcaatcaatcaatcagtcaattaAGCTATGAATGGTTGATGTTAAGCGCTTGGCAAAGCTCACACCTTGGCATTGATTACATGagaatttgaaatgtttaatggCATCTCATGCAGAAATGCTGATGCAGCATGTTACCCTGTGTTATAGCTGCATGGCATTTGCTCATTCTATCAAAAGAACAAGCTGCTTGTGTAATGACTTCCTCTCtctattatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggctgtcgAGTGCGGATTTGCTGGTCGAGCGCATGCCTCCCTCTGCCTGGCTCCTTATAGTGCCGGGCGGGAGGCAGGAATTCTGACCGAGTGGTACGGACATCGCCGCCGGTGACCACAAACACGAAGCTCTCCCTTTAAACAAGGTCTCATGATCGACAACTCTTTCAATCAGTTGTCTTGGCGTGGAGGATCAGGGCGAACGCACGTCCTGCTGGAGTGACAGTGATAGTGGAGCTGAACATCAGGAGCAGCTGACACTCACACAATCCAGAGaagaaagtatgacttacaggtttggaatgacatgaggATCTTGACCTGTTGATCATGCATCAGCTGTCTGTGACTTCGCTGTTGCTATGTCTGTGGCTGCTGGAGcgctgccatggcaacagccTCAATGATCTACACACACAGTTTGGAGTCAGCCTCTACCAAACACTCACAGAGACGGAGAACAACTCCAACCTGATCGTGTCTCCAGCCAGCGTCTCGTTGTGTCTTGGTCTTCTTCAGCTCGGTGCCAGGGGAAACACTCTAGCACAACTCGAGGAAACTCTGGGATATGACGTGAATGATGCTCGAGTGCAGGACATTTTGTCTCGCCCACAAGGAGACCTGGGTAATTCCAGTGAAGGGGTACAGCTTCAGCTTGCCAATGCCTTATTTGTCCAGAGTGGTGTGAAACTCCTGCCAGAATTTACCCAGCATGCCTTGGGATGGGGTAACAGTAGTCTACTGAGTGTAAACTTCAGTAATCCAAACCACACTCATAGTCGGCTACAGCAGTGGACACGTTCCCAGAGTAAAGctGATGACCATCTCCAGACAAAAGAGGAACAGCTTCCGTCCCAGGAAGAGGCCTCCAGGCAAGACAGTTTACTGCACATGGCTCTTCTGAGCACGGTGGTGTTTCACGGTGCCTGGCAGAAACAATTTCTCTTCACTGACACTCAGAACCTGCCCTTCAGCCTCTCAGACGGCAGCACAGTCAAAGTCCCGATGATGTACCAGTCAACCGGAGTCAATATTGGTCATTTCCGCCTGCCGTCTGAGCAGGAGTACACTGTGCTGGAGCTTCCGTACTTAGATCGCTCACTCAGGCTACTGGTGGCCTTACCTAGTGACCGGAAAACCTCTCTGTCCCAGCTGGAAAAGCAGCTCACTTCCCATTCTGTGGGACTGTGGGATACTGCATTAAGACGCACTAAAATGGATATATTTCTGCCCAGGTTTAAGATGCAGAGCAGGTTCAATCTGAAGCCCGTTTTACAGTCTCTCGGTATCTCTGATGTCTTCAGTCCGTCAGCTGCTGATTTTAGAGGCATCTCAGACGGAGAAGGGCTTTTTGTGTCAGAGGCTTTCCATGAGGCAAGAATAGAAGTGACCGAGGAAGGGACAAAAGCAGCTTCAGCTACAGCAATGGTGCTTTTGAAAAGATCCCGTTCAGCGGTTTTCAAAGCAGATCGACCGTTTCTCTTCATCTTACGGCAGATTAGTACAGGGTCATTGTTGTTTATAGGTCGAGTTCTGAATCCAGCCGAGATGTCTTGAGATGACGCACGCAATCACGACTGCTTCaaatgacaaacacacaggagACTTGTTTTAATATACACTTGTATGATTTTGCCAACTCCACACCCCCCTCCTCCCTCATGGGTGGGGGGTCAGAGGGATATCTGAGGACCGTAAGGAGGGTCCACTGACGCTTCAGGAAGAGGGACGAGACTTTTGTACAtatctgtaaataaaattttattacatcagggtttttgca
>XM_043249088.1
acacatttatcatataaattagatcattataaatacagacatgtaaatactttttcaaaatgtatacttttcaaaatgaatgcatttatatataaataataaatacacagaacgCAGACATTTATTGTACagccaacattttttttcttttgtatgcgattaatcacgatcaatataaatatattttaagaagaaaacaatttttaacaatatttcacagttttgctgttttgcaGCCCATTGAGTGTCATACTCCATtccagtcaatcaatcaatcaatcagtcaattaAGCTATGAATGGTTGATGTTAAGCGCTTGGCAAAGCTCACACCTTGGCATTGATTACATGagaatttgaaatgtttaatggCATCTCATGCAGAAATGCTGATGCAGCATGTTACCCTGTGTTATAGCTGCATGGCATTTGCTCATTCTATCAAAAGAACAAGCTGCTTGTGTAATGACTTCCTCTCtctattatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggctgtcgAGTGCGGATTTGCTGGTCGAGCGCATGCCTCCCTCTGCCTGGCTCCTTATAGTGCCGGGCGGGAGGCAGGAATTCTGACCGAGTGGTACGGACATCGCCGCCGGTGACCACAAACACGAAGCTCTCCCTTTAAACAAGGTCTCATGATCGACAACTCTTTCAATCAGTTGTCTTGGCGTGGAGGATCAGGGCGAACGCACGTCCTGCTGGAGTGACAGTGATAGTGGAGCTGAACATCAGGAGCAGCTGACACTCACACAATCCAGAGTGTTTGCAGATCTTGACCTGTTGATCATGCATCAGCTGTCTGTGACTTCGCTGTTGCTATGTCTGTGGCTGCTGGAGcgctgccatggcaacagccTCAATGATCTACACACACAGTTTGGAGTCAGCCTCTACCAAACACTCACAGAGACGGAGAACAACTCCAACCTGATCGTGTCTCCAGCCAGCGTCTCGTTGTGTCTTGGTCTTCTTCAGCTCGGTGCCAGGGGAAACACTCTAGCACAACTCGAGGAAACTCTGGGATATGACGTGAATGATGCTCGAGTGCAGGACATTTTGTCTCGCCCACAAGGAGACCTGGGTAATTCCAGTGAAGGGGTACAGCTTCAGCTTGCCAATGCCTTATTTGTCCAGAGTGGTGTGAAACTCCTGCCAGAATTTACCCAGCATGCCTTGGGATGGGGTAACAGTAGTCTACTGAGTGTAAACTTCAGTAATCCAAACCACACTCATAGTCGGCTACAGCAGTGGACACGTTCCCAGAGTAAAGctGATGACCATCTCCAGACAAAAGAGGAACAGCTTCCGTCCCAGGAAGAGGCCTCCAGGCAAGACAGTTTACTGCACATGGCTCTTCTGAGCACGGTGGTGTTTCACGGTGCCTGGCAGAAACAATTTCTCTTCACTGACACTCAGAACCTGCCCTTCAGCCTCTCAGACGGCAGCACAGTCAAAGTCCCGATGATGTACCAGTCAACCGGAGTCAATATTGGTCATTTCCGCCTGCCGTCTGAGCAGGAGTACACTGTGCTGGAGCTTCCGTACTTAGATCGCTCACTCAGGCTACTGGTGGCCTTACCTAGTGACCGGAAAACCTCTCTGTCCCAGCTGGAAAAGCAGCTCACTTCCCATTCTGTGGGACTGTGGGATACTGCATTAAGACGCACTAAAATGGATATATTTCTGCCCAGGTTTAAGATGCAGAGCAGGTTCAATCTGAAGCCCGTTTTACAGTCTCTCGGTATCTCTGATGTCTTCAGTCCGTCAGCTGCTGATTTTAGAGGCATCTCAGACGGAGAAGGGCTTTTTGTGTCAGAGGCTTTCCATGAGGCAAGAATAGAAGTGACCGAGGAAGGGACAAAAGCAGCTTCAGCTACAGCAATGGTGCTTTTGAAAAGATCCCGTTCAGCGGTTTTCAAAGCAGATCGACCGTTTCTCTTCATCTTACGGCAGATTAGTACAGGGTCATTGTTGTTTATAGGTCGAGTTCTGAATCCAGCCGAGATGTCTTGAGATGACGCACGCAATCACGACTGCTTCaaatgacaaacacacaggagACTTGTTTTAATATACACTTGTATGATTTTGCCAACTCCACACCCCCCTCCTCCCTCATGGGTGGGGGGTCAGAGGGATATCTGAGGACCGTAAGGAGGGTCCACTGACGCTTCAGGAAGAGGGACGAGACTTTTGTACAtatctgtaaataaaattttattacatcagggtttttgca
>XM_043249089.1
acacatttatcatataaattagatcattataaatacagacatgtaaatactttttcaaaatgtatacttttcaaaatgaatgcatttatatataaataataaatacacagaacgCAGACATTTATTGTACagccaacattttttttcttttgtatgcgattaatcacgatcaatataaatatattttaagaagaaaacaatttttaacaatatttcacagttttgctgttttgcaGCCCATTGAGTGTCATACTCCATtccagtcaatcaatcaatcaatcagtcaattaAGCTATGAATGGTTGATGTTAAGCGCTTGGCAAAGCTCACACCTTGGCATTGATTACATGagaatttgaaatgtttaatggCATCTCATGCAGAAATGCTGATGCAGCATGTTACCCTGTGTTATAGCTGCATGGCATTTGCTCATTCTATCAAAAGAACAAGCTGCTTGTGTAATGACTTCCTCTCtctattatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggctgtcgAGTGCGGATTTGCTGGTCGAGCGCATGCCTCCCTCTGCCTGGCTCCTTATAGTGCCGGGCGGGAGGCAGGAATTCTGACCGAGTGGTACGGACATCGCCGCCGGTGACCACAAACACGAAGCTCTCCCTTTAAACAAGGTCTCATGATCGACAACTCTTTCAATCAGTTGTCTTGGCGTGGAGGATCAGGGCGAACGCACGTCCTGCTGGAGTGACAGTGATAGTGGAGCTGAACATCAGGAGCAGCTGACACTCACACAATCCAGAGaagaaagtatgacttacaggtttggaatgacatgaggTTTGGAGTCAGCCTCTACCAAACACTCACAGAGACGGAGAACAACTCCAACCTGATCGTGTCTCCAGCCAGCGTCTCGTTGTGTCTTGGTCTTCTTCAGCTCGGTGCCAGGGGAAACACTCTAGCACAACTCGAGGAAACTCTGGGATATGACGTGAATGATGCTCGAGTGCAGGACATTTTGTCTCGCCCACAAGGAGACCTGGGTAATTCCAGTGAAGGGGTACAGCTTCAGCTTGCCAATGCCTTATTTGTCCAGAGTGGTGTGAAACTCCTGCCAGAATTTACCCAGCATGCCTTGGGATGGGGTAACAGTAGTCTACTGAGTGTAAACTTCAGTAATCCAAACCACACTCATAGTCGGCTACAGCAGTGGACACGTTCCCAGAGTAAAGctGATGACCATCTCCAGACAAAAGAGGAACAGCTTCCGTCCCAGGAAGAGGCCTCCAGGCAAGACAGTTTACTGCACATGGCTCTTCTGAGCACGGTGGTGTTTCACGGTGCCTGGCAGAAACAATTTCTCTTCACTGACACTCAGAACCTGCCCTTCAGCCTCTCAGACGGCAGCACAGTCAAAGTCCCGATGATGTACCAGTCAACCGGAGTCAATATTGGTCATTTCCGCCTGCCGTCTGAGCAGGAGTACACTGTGCTGGAGCTTCCGTACTTAGATCGCTCACTCAGGCTACTGGTGGCCTTACCTAGTGACCGGAAAACCTCTCTGTCCCAGCTGGAAAAGCAGCTCACTTCCCATTCTGTGGGACTGTGGGATACTGCATTAAGACGCACTAAAATGGATATATTTCTGCCCAGGTTTAAGATGCAGAGCAGGTTCAATCTGAAGCCCGTTTTACAGTCTCTCGGTATCTCTGATGTCTTCAGTCCGTCAGCTGCTGATTTTAGAGGCATCTCAGACGGAGAAGGGCTTTTTGTGTCAGAGGCTTTCCATGAGGCAAGAATAGAAGTGACCGAGGAAGGGACAAAAGCAGCTTCAGCTACAGCAATGGTGCTTTTGAAAAGATCCCGTTCAGCGGTTTTCAAAGCAGATCGACCGTTTCTCTTCATCTTACGGCAGATTAGTACAGGGTCATTGTTGTTTATAGGTCGAGTTCTGAATCCAGCCGAGATGTCTTGAGATGACGCACGCAATCACGACTGCTTCaaatgacaaacacacaggagACTTGTTTTAATATACACTTGTATGATTTTGCCAACTCCACACCCCCCTCCTCCCTCATGGGTGGGGGGTCAGAGGGATATCTGAGGACCGTAAGGAGGGTCCACTGACGCTTCAGGAAGAGGGACGAGACTTTTGTACAtatctgtaaataaaattttattacatcagggtttttgca

Function

symbol description
serpine3 Orthologous to human SERPINE3 (serpin family E member 3).

NR:

description
probable serpin E3

GO: NA

KEGG:

id description
K23429 SERPINE3; serpin E3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249086.1 False 2276 mRNA 0.46 9 13386661 13400112
XM_043249087.1 True 2314 mRNA 0.46 10 13386660 13400112
XM_043249088.1 False 2286 mRNA 0.46 9 13386660 13400112
XM_043249089.1 False 2207 mRNA 0.46 10 13386660 13400112

Neighbor

gene id symbol gene type direction distance location
LOC122352182 LOC107685564,LOC107723675,LOC107725243,LOC107695580 coding upstream 167 13371593 ~ 13386493 (+)
asb18 asb18,LOC107723656,LOC107686685,LOC107567774 coding upstream 15733 13363066 ~ 13370927 (+)
LOC122351698 col6a3,LOC107685998,LOC107723650,LOC107695585,LOC107725234 coding upstream 38087 13260261 ~ 13348573 (+)
LOC122351699 LOC107567775,LOC107739950,LOC107670696 coding upstream 108064 13275992 ~ 13278596 (+)
rpe rpe,LOC107695573,LOC107725216,LOC106919839 coding upstream 151391 13232306 ~ 13235269 (+)
wdfy2 wdfy2,LOC107725248,LOC107685482,LOC107723695,LOC107695578 coding downstream 11675 13411787 ~ 13419851 (+)
trnal-caa NA coding downstream 23602 13423714 ~ 13423826 (+)
esyt3 esyt3,LOC107685117,LOC107723684,LOC107695576,LOC107555067,LOC107725232 coding downstream 25078 13425190 ~ 13433984 (+)
parp9 NA coding downstream 44143 13444255 ~ 13449599 (+)
ndufa10 ndufa10,LOC107684997,LOC107567779 coding downstream 56003 13456115 ~ 13460454 (+)
G69796 stk17b non-coding upstream 252821 13130098 ~ 13133839 (+)
G69789 NA non-coding upstream 278828 13107595 ~ 13107832 (+)
G69783 NA non-coding upstream 279903 13106280 ~ 13106757 (+)
G69723 NA non-coding upstream 546509 12837719 ~ 12840151 (+)
G69718 NA non-coding upstream 612810 12773334 ~ 12773850 (+)
G69985 NA non-coding downstream 115577 13515689 ~ 13518237 (+)
G70021 NA non-coding downstream 268994 13669106 ~ 13669444 (+)
G70029 map3k19,LOC107684057,LOC107723646,LOC107555330,LOC107725236,LOC107658294 non-coding downstream 285684 13685796 ~ 13686466 (+)
LOC122351436 LOC107555330 non-coding downstream 286553 13686665 ~ 13689033 (+)
G70032 NA non-coding downstream 292102 13692214 ~ 13692487 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other upstream 82069 13289693 ~ 13304591 (+)
G69755 NA other upstream 400682 12984868 ~ 12985978 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other upstream 583252 12732298 ~ 12803408 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other upstream 757125 12627535 ~ 12629535 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other upstream 934295 12434988 ~ 12452365 (+)
ccnt2a ccnt2a,LOC107658298,LOC107725237,LOC107723659,LOC107684218,LOC107555058,LOC107555362 other downstream 276051 13676163 ~ 13684835 (+)
LOC122351767 NA other downstream 1186970 14587082 ~ 14589439 (+)
si:ch211-168k14.2 si:ch211-168k14.2,LOC107681321,LOC107748618,LOC108441415,LOC105905900,LOC108266656,LOC107600399 other downstream 2001015 15401127 ~ 15425361 (+)
LOC122351678 hspe1,mob4,LOC107690609,LOC107595852,LOC107569672,LOC107731766,LOC106586370,LOC105016277,LOC100701317,LOC103156730,LOC101472107,LOC102310674,LOC102783361,LOC108238849,LOC107690608,LOC106582314,LOC105899369 other downstream 2308089 15708201 ~ 15715901 (+)
plcl1 LOC107569711,LOC107731752,LOC107690606,LOC107719808,LOC107659890,LOC107595846 other downstream 2334458 15734570 ~ 15789702 (+)

Expression


Co-expression Network