mid1ip1a (mid1ip1,mid1ip1a,LOC107655494,LOC107748224,LOC107663855,LOC107555231,LOC107600390)


Basic Information

Item Value
gene id mid1ip1a
gene name mid1ip1,mid1ip1a,LOC107655494,LOC107748224,LOC107663855,LOC107555231,LOC107600390
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 10165180 ~ 10166422 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249111.1
ACAGCATTCCTTCAGAAACAACTGAGCGCACGAGAGGCAAACACACTACTCTCGAATCAACCCTCACAAACCAGCACAATGCAGATGTCCGAGCCCCTCAGCCAGAAGAACGCTCTGTTCACGGCAATGAACCGCTTCATCGGCGCCGTCAACAACATGGATCAGACGGTCATGGTGCCCAGTCTGCTGAGAGACGTGCCGCTGGACATAGAGAAAGAGCAGCAGAAACTAACCAACGACCCGGGCAGCTATCTGCGGGATGCTGAGGCCGACATGTACAGCTATTACAGCCAGCTCAAGTCCATCCGGAACAACATCGAGTGGGGCGTCATGCGCGCAGAGGAGCAGAGGCGCAAGAAAGACACGGGAGCGCCGGAACCAGCGCGCACGGAACCCGAGAGCGACACGGACCTGGAGCAGCTCCTGCAGTACCATCTGAGGGGCCTGCATGGGGTGCTGTCCAAACTCACCAGCCAAGCCAACAACCTGACCAACCGCTACAAGCAGGAGATCGGCATCGCTGGCTGGGGACAGTGAGCTGCATCGTGGTCTATtggaagatgaagatgaactATTCTGATCTAATAGGATCTATTTTGCCTTTGTGGAAGAGCCTACCGAAGGGACTGAGCGAACTGAAGTTAAACTGTCAAAAGTTAAAATGCAAGACAAACCGAGAGGGGAAAGTGGGTTTGTTGTAGACTAGTATTGGTTTTGGTGTTGATCACTGATGGGCTGCTTCTTGTCTTGTGGCATTTTATTTGCACTGACAGTTTtccctttaaaaaacaaaaacaaaatccgtTCAAATGGCTGGTTGCCATGCCTTATCttgtatttaaatctatttatgtGCTATGTATAAttgaaagcttttatttttccattctttttcattttgtgagAGGAAGGTTGTTGTCCTGTGACGTTGCCGTATGCTCCGGAGGACTGATAACTTGAAGAACTGATAGTCTGTACGAGTGAGAACTCCTATTGATGAAACAGAAACCCTGTAGAAAATCCTTGGGAGTATTTCCTGCTAATGACCTGAAACTATTTGTGAATTATACTTTGAGTCAATGACGTGCATGGCTCTGAAAACCACTCCGTGTGTCATGAAGAGCAACATGAGATTCTGTGTTAAATTGTGCCTGAAGTCCAgcattattgttaaaaacatttgctgCATTTTGTACTGAATTGttttttactacaaaataaacttttttttaatttgaaaaca

Function

symbol description
mid1ip1a Predicted to be involved in regulation of lipid biosynthetic process. Predicted to be located in cytoplasm; microtubule; and nucleus. Predicted to be active in cytosol. Is expressed in brain. Orthologous to human MID1IP1 (MID1 interacting protein 1).
mid1ip1 Predicted to enable identical protein binding activity and protein C-terminus binding activity. Predicted to be involved in several processes, including negative regulation of microtubule depolymerization; positive regulation of fatty acid biosynthetic process; and protein polymerization. Predicted to be located in cytoplasm and microtubule cytoskeleton. Predicted to be active in cytosol.

NR:

description
PREDICTED: mid1-interacting protein 1A-like

GO:

id name namespace
GO:0005874 microtubule cellular_component
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249111.1 True 1243 mRNA 0.46 1 10165180 10166422

Neighbor

gene id symbol gene type direction distance location
otc otc,LOC107555229,LOC107663890 coding upstream 2244 10160341 ~ 10162936 (+)
sytl5 sytl5,LOC107555233,LOC107663897,LOC107748209,LOC107655524 coding upstream 25935 10117861 ~ 10139245 (+)
asb11 asb11,LOC107748226,LOC107720119,LOC107655497,LOC107600386 coding upstream 47632 10113994 ~ 10117548 (+)
gja8a cx50.5,LOC107748212,LOC107555237,LOC107720117,LOC107600427,LOC107655525 coding upstream 78219 10082276 ~ 10086961 (+)
si:dkey-229b18.3 LOC107748215,LOC107663849,LOC107720115,LOC107655527,LOC107572534 coding upstream 113646 10042165 ~ 10051534 (+)
impg2a impg2,LOC107748205,LOC107655518,LOC107600387,LOC107720123 coding downstream 19324 10185746 ~ 10200828 (+)
LOC122351607 abi3bp,LOC107748202,LOC107655519 coding downstream 42427 10208849 ~ 10226652 (+)
dcbld2 dcbld2,LOC107600392,LOC107655516,LOC107706081 coding downstream 95956 10262378 ~ 10279903 (+)
LOC122351198 LOC107706096,LOC107663847,LOC107663844,LOC107555219,LOC107706098 coding downstream 235923 10402345 ~ 10405495 (+)
LOC122351200 LOC107663844,LOC107555219,LOC107706096,LOC107706098,LOC107663847 coding downstream 239561 10405983 ~ 10408038 (+)
G69042 NA non-coding upstream 56996 10107840 ~ 10108184 (+)
G69034 NA non-coding upstream 94289 10070658 ~ 10070891 (+)
G69033 cx45.6,LOC107663873,LOC107748213,LOC107572527,LOC107655501,LOC107720145,LOC107600426 non-coding upstream 102744 10062208 ~ 10062436 (+)
G69032 NA non-coding upstream 103293 10061685 ~ 10061887 (+)
G69031 NA non-coding upstream 103569 10061058 ~ 10061611 (+)
LOC122351843 NA non-coding downstream 8626 10175048 ~ 10179380 (+)
G69089 NA non-coding downstream 254060 10420482 ~ 10420692 (+)
G69090 NA non-coding downstream 255621 10422043 ~ 10422253 (+)
LOC122351945 NA non-coding downstream 256792 10423214 ~ 10435142 (+)
G69080 NA non-coding downstream 282279 10448701 ~ 10457161 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other upstream 51824 10092350 ~ 10113356 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 598183 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 1004359 9156045 ~ 9160821 (+)
si:ch1073-416j23.1 si:ch1073-416j23.1,LOC107749868,LOC107663920,LOC107556448 other upstream 1015087 9142592 ~ 9150093 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other upstream 1293547 8867097 ~ 8871633 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other downstream 914 10167336 ~ 10174783 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other downstream 162309 10328731 ~ 10395230 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other downstream 855314 11021736 ~ 11030409 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 1299182 11465604 ~ 11490149 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other downstream 1880077 12046499 ~ 12155804 (+)

Expression


Co-expression Network