LOC122351829 (LOC107670324,LOC107577992,LOC107578707)


Basic Information

Item Value
gene id LOC122351829
gene name LOC107670324,LOC107577992,LOC107578707
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5142408 ~ 5148171 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249172.1
TGATTATGCAGAGGTTATTATGTTATGATTAGCAAAAATAACTGGCTTATCAAACACTAACCCACAGGTTTCACAGATGAGTCTTAAGCTAGTCCcagatcaaaataaaaatactctgACCTTGACgtatcttaaaatatgtaatatgtgttaataaaagttaaatactTAAATCTTAACTTAACCAAGGCCTAGTCCTGGCTAAAGCTAATCCCCGTTTGTGACACTGGGCTTTAATCTTATATGATGAAGTTCATCTTGTGAAAACGATCTTTAAGTGTATTGGAAGCAAATGCAGGCGCAATAAAGTTTGTCAGATGTTTTAAAGCACGATGGAGTACGAAGTGCTGTTGAAACGATCACCTAGGTTACACAAACTACTGAACGACATCggcgtgtttttttttgagcGCCCACTTCCGCCTTTCTCTTTCCATTTCGAGTAAATGGTGTCACGGTCACGGAATTTTTCTGAGTCTCCTCTCCACGCGCTTCCACCGGAGATGCTCCGTTCACTCACAGCACATCTCTCTCGAGAGATCTCGGAGCACGATGTCTGGCCTTTTGCGCACTATCAGTCAGATCACAGACGAGCTCAGCGCCGACGAATGCAAGCGGGTCTCCTACCTGTGCGGCGCTCTCGACGCGGACAAGTTCTCCGCCGATCCCAGAGGCACGTTACAATCCGTGCTGTGCCAAGCCAGGACGGATTACACCTTTCTCATGGAGCTCGTTCTGAGAATAAAGCGCTACGATCTGCTGAGAGAAGTGCTGAGCACCGACAAGAGCTCGGTCGAGGGCCTGCTGAAGAACGGCCATTCTGTGTCCCAGTACAGagtgctGATGGCCGATGTTGGCGAAGACATGGACTCGGAGGACCTGAAGTCGATGATGTTCTTACTCAAAGGCACTTTACCCCAGAAAAAACTGGAAAATGTCCAGAGTTTTTTAGACGTTGTAGTGGAGTTGGAGAAGCTCGACCAGCTCTCCAGTGAGAAGATGGACTTGCTCGAACGCTGCCTGAGGTCCATCCACAGAGCCGATCTGGCTCAAAGGATCCGTCACTACCAGCAGACGGCGCTGATGGCCGGACAAGGATCTTCCCCTCCGGACAGGCTGAAGCTCTGCAGAGCGCCCTTGCCGAGCAGCTCGTTCGGTGTCTCGTCCGCTTCCTGCAACGTCCGGCCGGCTTCCAGAGTCTGTGataaaccgGCTGCAGTGAAGAAGGAGCAGCTTGGAGCTAGCTTTTATTGTCagCAGGAGGAAGTGTACAGTATGCAGAGTGACCCCAGAGGACTGTGTTTAATCATAGACTGTGTCGGCACTGAAGGAGACGCGCTGGAGCAGACGTTCAAGGCCCTGCGCTTCCACGTGATCACGCGCAGGCTGCTGGGTGCGAGGGACGTTCGGTCCGCTCTGAGGGACGCGGCTCGTCAGCGGGGTCACTGCAGAGCGTCCGTCTTCGTCTGCTGTGTTATCAGCCGAAGCCGCCGCTCCGATCTGCTGGCCACCGACTCTCACGGCCCAGGACTGAACCTGGAGAGCGTCAGGCGCCTCTTCACCTCGGACTCCTGCCCGGGCCTGGCAGGCAAGCCCAAGCTCTTCTTTATCCAGAGCTACGACGAGTCCGAGCGCACGGCGTGTGAGGACGACGAGGAGAGCGGAGAGCTGGAGACCGACGGGCATGTGCTCTTATGCTGCGAGGGGACTGTCCCGGCGGATGCGGACATCTTCTGGAGTCACTGCTGGACTCGAGGGAAACAGCTGGAGCTGCCAAACCATCGCTCCGTGTACCTGAAAGCCTTGAGATGCGCCTTGAGCGAGGGGCAGAAGAGgAGGACTCATGTGGTAGACTTGCACGTGGCGGTGAATCGCGCAGTATATGAGCACAATCAGGCATCTCCAGGATCCTCTTACTCTTTAAACCTGAGACACACTCTCAGGAAGACGGTCTATTTGTCTTGATTCCGTCCCGAAGCCTTCCGTTTCAGTGAAGGTAGACGACTATTCAAGAACGTCTGGTTTTTGAGCAGATGATCATCATCGTAATATCGTCGGTGTGAATTGTATCAGATATGATTTGGAACCGTGTTTCAGCGAGTCTTGTGTTGTTGTAGTTTCCCGTTTCGTCCACACGGGGGCGGTGTCGTCCTGTGAACTTCACCGCCGCGCGCGTTAAACCCGTTTtaggattttctttctttaaaacatgAACTTATTGCGCTTAGTAAAATTTACtagtattcatttaatttaataaattaggCAAAGAAAGtctgaacaaaagagaaaaaacataaCCTAAAGGTTATATTCCGTCTATCCAGATGCACGTTTTATAAGCACGTTTATTGTCGTTTCATTTGTCgttgaatgaaaatgtttgtgtatgtatatctCTTGAACGGGTTAACAATGATGTAACTTTATcagacttgtttttgttttcctacACTAGCAAAGTGtttaaagaaactaaaactGTGAAACGGTTcagtattgttttttatatgtttatgtaaatttgACATCCAATCCCTTTGCCTTGTTTTGTCACGAGATTATtgaaactaataaatatatttatacgcTAAATGAACCCTGAAAAAG

Function

NR:

description
PREDICTED: CASP8 and FADD-like apoptosis regulator isoform X2

GO: NA

KEGG:

id description
K04724 CFLAR, FLIP; CASP8 and FADD-like apoptosis regulator

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249172.1 True 2610 mRNA 0.49 10 5142408 5148171

Neighbor

gene id symbol gene type direction distance location
usp37 usp37,LOC107670323,LOC107549772 coding upstream 4258 5128137 ~ 5138150 (+)
en1a LOC107670337,LOC107720935 coding upstream 34018 5105850 ~ 5108390 (+)
marco NA coding upstream 43032 5094242 ~ 5099376 (+)
c1ql2 c1ql2,LOC107670317,LOC107689526,LOC107549752,LOC107752616,LOC104939125 coding upstream 73083 5066823 ~ 5069325 (+)
LOC122351173 LOC107670300,LOC107720934,LOC107576887,LOC107549889 coding upstream 82779 5058563 ~ 5059629 (+)
cd58 NA coding downstream 221432 5369603 ~ 5376786 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding downstream 229080 5377251 ~ 5386269 (+)
si:dkey-11f4.14 NA coding downstream 238301 5386472 ~ 5391186 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 375389 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 480951 5629122 ~ 5732070 (+)
G67888 NA non-coding upstream 40744 5101359 ~ 5101664 (+)
G67882 NA non-coding upstream 58107 5084043 ~ 5084301 (+)
LOC122351367 NA non-coding upstream 90260 5050450 ~ 5052148 (+)
G67872 NA non-coding upstream 117046 5022240 ~ 5025362 (+)
G67867 LOC107752614,LOC107689494,LOC107747239,LOC107670320,LOC107560813 non-coding upstream 130971 5006890 ~ 5011437 (+)
G67955 NA non-coding downstream 148484 5296655 ~ 5297005 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding downstream 158847 5307018 ~ 5313560 (+)
G67970 NA non-coding downstream 190798 5338969 ~ 5341289 (+)
G67979 NA non-coding downstream 225238 5373409 ~ 5392379 (+)
G68013 NA non-coding downstream 319370 5467541 ~ 5562170 (+)
ndufb3 ndufb3,LOC107752587,LOC107549774,LOC107549916,LOC107689503,LOC107720946 other upstream 256 5140145 ~ 5142152 (+)
LOC122351471 NA other upstream 113769 5025563 ~ 5028639 (+)
c9h2orf76 zgc:101851,cunh2orf76,LOC107670315,LOC107747242,LOC107560816,LOC107752580,LOC107549781,LOC107689495 other upstream 124070 5015470 ~ 5018338 (+)
rbm45 rbm45,LOC107716918,LOC107752596 other upstream 425175 4709053 ~ 4717233 (+)
G67717 LOC107716922,LOC107657385,LOC107725823,LOC107671308 other upstream 579806 4523286 ~ 4562602 (+)
trnar-ccu_4 NA other downstream 257058 5405229 ~ 5405301 (+)
trnar-ccu_5 NA other downstream 257732 5405903 ~ 5405975 (+)
trnar-ccu_6 NA other downstream 259305 5407476 ~ 5407548 (+)
trnar-ccu_7 NA other downstream 260078 5408249 ~ 5408321 (+)
trnar-ccu_8 NA other downstream 260813 5408984 ~ 5409056 (+)

Expression


Co-expression Network