LOC122351832


Basic Information

Item Value
gene id LOC122351832
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 22482226 ~ 22484709 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249180.1
atctttaacatgtttattgtttaatctGAGACTTTCCTTTATGCCTTCGTTATTTGGTCGTGGTCCCTTTAAGAATCTTAGGTTTCGGTATAGAGTTATGCCATGTGATTGAGGAAGCGAGCATGTTCAGCAGAGAGTAGCTTTCGTAGCATTTTTTTGAAGCTTACTGTTATATTGCATACTTCTTGCATCTGTTTTAGCATCGTGGttTCACCTTTCCTCACAACGTCAATAAACCTGTGGACGAGGAGCTTATGTCTTCAGAGTCTTGATGTTAGGGAAAAGTTTACCTGGCTGTCACGTTATATCCAGTACATATAGCAAGGGCAGCACAGTGAAACCACGTTGGCTTAAGACAGGATTGTGCAATGCAAGCTGGCAGTTAATGGTAAAATAGACTACTTAACTTCGCTATGGCAACAGATAACCATTCAATAAAGACACGCTCTCATGCTTCCTGCTCTTCAGTACGATCAAGTACATCGTCAACTGGGTCTGCAGCAGCTAAGGCAAGAGCAAGGGCAGAAGCAGCAAAAGCACGTCTTACCTTTGCCGAAGAGGAAGTTAATCTAAAGCTACAAAAGGCCAGAGTGGAGGCATCTATGGAAGTGCTACAGCATAAGAAGGAGGCAGCTGCAGCAGTCGCCGAAGCAGAGGCGCTTGAAGCTGCTATTGACGAAAATGCTGAGAAACACAGTTGTGTGCTAAGTGTGAATTCTGCCCCTCTGGAAGCCAAACAACGCACTGAACAATATATTATTGATCAAACGGAAGTGCAAGAGACAGAACTGTATCATGTCCCAGCTAAAATAGAACCAATCACAAGTTACGGCATCCCATCTTCATGTCTCAAACCTGAAGCCAAACCTTTCCTTTCACGCCATGCAAGTGTTGCCTTCCAACCACCTGCTACCACCTCACAACAGCCAAGCACCTATGAAAACGAGTATGTTCATAACTCATGCGAAGCTGGATTTGAGAATAACAATTCAACACCCTTGCAACGTTTTAGGCAAAATAGCAATGGTTATCCGACTCCTCAGCCCTACCCTATTTCCCCAAATTCAAACAACTGCAGCTCAAACATGAATGACTTTGTAAGATTTCTTGCTCGTCGTGAGCTAGTGGCAACAGGTTTACTGCAGTTTAATGACAAACCTCAGAATTACAGAGCCTGGAAACGTTCTTTTCAGTCTGCAACTGCTGATTTAAACCTGACTTCTAGTGAAGAGATGGATCTCCTTCTAAAGTGGCTTGGCAAGGAGTCTGCAGAGCATGTTGAACAGATAAGGGCAATACACATCAACCATCCACAAGCAGGACTGGCTATGGCATGGGACAGACTGGATCAAGCGTATGGCTCTACGGAAGTAATAGAAGATGCCCTATTCAAACGTATTGATGCCTTTCCTAAAATAACCAACAGAGATTATTCTAAACTGACAAAATTGAGTGATCTGTTAATGGAGCTTCAGTCAGCTAAGGCAGAAGGAGACTTGCCAGGTCTTGCTTTCTTAGACACTGCAAGAGGTGTCAATCCGATAGTACAGAAGCTACCGTTTCGTTTGTAAGAGAGATGGGCATCAGTCGGCGCAGCCTACAAGCGTCAAAATCGTGTTCCTTATCCCCCCTTTGCCTTCTTTGTGGATTTTGTTTGCCAAGAGGCAAGCATTGGAAACGATCCAAGCTTCAACTTTGTCTCTCAAATAGACTTGACTCCCAAAATGGAGAAGACAGCTTGGAGGCCCAACAAACAACGAGAAATTTCTGTACACAAGACAGCGGTATATTCAAGAGTTGCCAATGATGCTAGGGAGCTTTCAAAAAAATCTGATGATTACGATAAACAGTGTCCTATTCATAGAAAACCGCACCCTCTAAATAAATGCCGCGTTTTCCGGGAAAAGCCGTTTGATGATCGCAAGGCTTTTTTAAGAGAGAATAATGTGTGCTTTAAATGCTGTGTTTCGACATCACATATTGCAAAAGACTGTAAGACTAAAGTCCAATGTTCTGAATGCAAAAGCGAAAGACACCACACTGCGCTCCACCCTGGGCCTGTACCCTGGAGAGATGAAGGCCCTGCTATGGAGCACGGCGGGGAGGGAGAGGAAGTCTTACCTCAATCTCAAGTCACCAGCAAATGTACAGAGGTCTGCGGAGAAAATCAGATGGACCGTTCTTGCTCTAAAATATGCCTTGTTAAAGTATTCCCAGCTGGCCGTAG

Function

GO:

id name namespace
GO:0030145 manganese ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249180.1 True 2227 mRNA 0.44 2 22482226 22484709

Neighbor

gene id symbol gene type direction distance location
LOC122352034 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC106582264 coding downstream 83573 22341408 ~ 22398653 (-)
neurod1 neurod1,LOC107601389,LOC107755376,LOC107676085,LOC107716998,LOC107601620 coding downstream 253727 22225558 ~ 22228499 (-)
LOC122351744 ube2e3,LOC107601610 coding downstream 574513 21897185 ~ 21907713 (-)
LOC122351560 ttn,LOC107657509,LOC107714399,LOC108435065 coding downstream 586179 21744043 ~ 21896047 (-)
LOC122351741 LOC107704498,LOC107549376 coding downstream 1311451 21168939 ~ 21170775 (-)
dusp19a dusp19a,dusp19,LOC107739447,LOC107699004,LOC107601374,LOC107601606,LOC107755360,LOC106586411 coding upstream 53266 22537975 ~ 22541710 (-)
dnajc10 dnajc10,LOC107755373,LOC107739439,LOC107699025,LOC107676092 coding upstream 113119 22597828 ~ 22610069 (-)
LOC122351760 LOC107755372 coding upstream 126649 22611358 ~ 22615781 (-)
LOC122351761 LOC107601373,LOC107755372,LOC107739445,LOC107601614,LOC107601364,LOC107739440 coding upstream 132155 22616864 ~ 22620788 (-)
vil1 vil1,LOC107699006,LOC107676071,LOC107755365,LOC107601613,LOC107739444 coding upstream 137349 22622058 ~ 22635997 (-)
G72535 NA non-coding downstream 23468 22311078 ~ 22458758 (-)
G72537 pde1a,LOC108443795,LOC107716994,LOC107699023 non-coding downstream 171748 22307182 ~ 22310478 (-)
G72502 ppp1r1c,LOC107699022,LOC107601387,LOC107716995,LOC107755374,LOC107676093 non-coding downstream 187158 22286774 ~ 22295068 (-)
G72500 NA non-coding downstream 358818 22123190 ~ 22123408 (-)
G72493 NA non-coding downstream 381988 22100026 ~ 22100238 (-)
G72583 NA non-coding upstream 95094 22579803 ~ 22580772 (-)
LOC122352087 NA non-coding upstream 101035 22585744 ~ 22588251 (-)
G72605 NA non-coding upstream 167793 22652502 ~ 22653575 (-)
G72603 LOC107739437,LOC107699030,LOC107601381,LOC107676090,LOC107755369,LOC107755357 non-coding upstream 173608 22658317 ~ 22658828 (-)
G72608 NA non-coding upstream 182188 22666897 ~ 22667111 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other downstream 258559 22171463 ~ 22223667 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other downstream 755406 21709288 ~ 21726820 (-)
G71938 nab1,LOC107565022 other downstream 1978336 20489164 ~ 20503890 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other downstream 2588911 19881550 ~ 19893315 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other downstream 2629601 19833920 ~ 19852625 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other upstream 1445498 23930207 ~ 23931329 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other upstream 1459276 23943985 ~ 23960325 (-)
G72978 LOC107722896,LOC107674757,LOC107558607,LOC107677899,LOC107755197,LOC107600691 other upstream 1735813 24220522 ~ 24280708 (-)
G73201 NA other upstream 2542876 25027585 ~ 25030965 (-)
G73301 NA other upstream 2864069 25348778 ~ 25349640 (-)

Expression


Co-expression Network