LOC122351834 (LOC107572957,LOC107663596,LOC107573769,LOC107728255,LOC107661170,LOC108265697)


Basic Information

Item Value
gene id LOC122351834
gene name LOC107572957,LOC107663596,LOC107573769,LOC107728255,LOC107661170,LOC108265697
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 25459895 ~ 25462849 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249181.1
GCAATGTCGCGGTGACGTTCTGTGACGTAGTTACGCACGTACGTGCAATGTCAGGGGTCAAACAACTTCCTGCTTCCGGTTAGCTTTCGAGGaatctgtgtctctctgtgctgtggtgcttCGGCGGACTCGAGGGAGAACATGTTGGCCTGGTTTCTGCTGCTGTGCGCGCAGCTGATGATCGGCTGGATCCGCGCCTCAGAGCTCACCTTCGAGCTGCCAGACAACGCCAAGCAGTGCTTCTACGAGGACATCACCATCGGCACTAAGTGCACTCTGGAGTTCCAGGTGGTCACCGGCGGTCACTATGACGTGGACTGTCGTCTGGAGGACCCGGACGGGACGGTTCTTTATAAAGAGATGAAGAAGCAGTACGACAGCTTCACCTTCACCGCCTCCAGGAACGGCACGTACAAGTTCTGCTTCAGCAACGAGTTCTCCACCTTCACGCACAAGACCGTCTACTTCGACTTCCAGGTCGGAGACGACCCTCCGCTGTTCCCCAACGAGAACCGAGTGACGGCTTTAACACAGATGGAGTCGGCCTGCGTCTCTATTCACGAGGCGCTGAAGTCCGTGATCGACTACCAGACACACTTCCGCCTGCGAGAGGCTCAGGGCCGCAGCCGAGCCGAGGATCTGAACACCAGAGTGGCCTTCTGGTCCATCGGGGAGGCCTTCATCCTGCTGGTGGTCAGCATCAGTCAGGTGGTGCTCCTCAGGAGCTTCTTCTCAGACAAGAAAACCACTACGACCCGCGTGGGATCATAACTCCTCTGACACTGTCCAAGggtttttatatgaatatgagttatttaaagaaaagcCTTGAGCTCGTTTTCTCTAGTCCTGTGTGCGATCCTCAGCTCATATCCAGCAGAGTATTTCAGCGCTGAAAATtaaactgctttatttattttgtggctGTGTTGACTCTCTACATGTATGTGAATGTTAAAGGATGTACAGACACTGTAGACCTGCTTGACACACCGGTGCAGTTTATacccatcatcatcatcatcatcatcatcactcaAGATGTAGTTCAGTCGTCATGTTTGAATGCGAGAGAGCTTTATTTGCTTTATGTTGTACAAAACAAGCATCCTTGCTCGTGTTTCCTAGTCgtaattttcttttcatgacattggtgtaattgtttttttttattaggtgtttatttttattagcggTGCATTGATTCTTGTTTGAATTGGTTAATAAATGTCTGGAGGAACGTC

Function

NR:

description
PREDICTED: transmembrane emp24 domain-containing protein 7-like

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K20349 TMED7; p24 family protein gamma-3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249181.1 True 1244 mRNA 0.50 4 25459895 25462849

Neighbor

gene id symbol gene type direction distance location
gpbar1 LOC107656509,LOC107564146,LOC107688960,LOC107739693,LOC107596586 coding downstream 652114 24803623 ~ 24807781 (-)
zgc:92380 zgc:92380,LOC107656510,LOC107564128,LOC107688951,LOC107739632 coding downstream 662841 24789506 ~ 24797054 (-)
LOC122351587 NA coding downstream 673658 24784903 ~ 24786237 (-)
LOC122351585 LOC107656512,LOC107744835,LOC107596607,LOC107739743,LOC107688961,LOC107564147 coding downstream 687636 24768285 ~ 24772259 (-)
cxcr2 LOC107656519,LOC107596606,LOC107739752,LOC107688962,LOC107564148,LOC107731305 coding downstream 695040 24761541 ~ 24764855 (-)
LOC122352035 rbms1,LOC107675130,LOC107730583,LOC107663836,LOC107722911 coding upstream 399904 25862753 ~ 25919696 (-)
gcgb gcgb,gcg,LOC107730589,LOC107677918,LOC107722905,LOC107674768,LOC105907977 coding upstream 602363 26065212 ~ 26067013 (-)
LOC122351282 fap,LOC107563829,LOC107722901,LOC107677917,LOC107561562 coding upstream 605389 26068238 ~ 26080787 (-)
ifih1 ifih1,LOC107722900,LOC107563828,LOC107730588,LOC107561563 coding upstream 619299 26082148 ~ 26104816 (-)
G73302 NA non-coding downstream 70080 25351063 ~ 25389815 (-)
LOC122351187 NA non-coding downstream 365096 25092636 ~ 25094799 (-)
G73186 NA non-coding downstream 619934 24839606 ~ 24839961 (-)
LOC122351686 NA non-coding downstream 638833 24812316 ~ 24821062 (-)
G73179 NA non-coding downstream 658518 24801038 ~ 24801377 (-)
G73305 cdo1,LOC102791980 non-coding upstream 9417 25472266 ~ 25476938 (-)
LOC122351247 NA non-coding upstream 281172 25744021 ~ 25750389 (-)
G73350 NA non-coding upstream 371468 25834317 ~ 25846796 (-)
G73351 NA non-coding upstream 397479 25860328 ~ 25862412 (-)
G73308 NA non-coding upstream 482552 25945401 ~ 25965894 (-)
G73300 LOC107577510,LOC107663597,LOC107729051,LOC107728259,LOC107661178 other downstream 1153 25456414 ~ 25458742 (-)
G73301 NA other downstream 110255 25348778 ~ 25349640 (-)
G73201 NA other downstream 428930 25027585 ~ 25030965 (-)
G72978 LOC107722896,LOC107674757,LOC107558607,LOC107677899,LOC107755197,LOC107600691 other downstream 1179187 24220522 ~ 24280708 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other downstream 1499570 23943985 ~ 23960325 (-)
G73347 NA other upstream 327668 25790517 ~ 25793056 (-)
LOC122351758 LOC107663860,LOC107722919,LOC107561565,LOC107585695,LOC107675138 other upstream 331234 25794083 ~ 25853303 (-)
LOC122351579 LOC107563831,LOC107730593,LOC107677922,LOC107674758,LOC107722906 other upstream 643808 26106657 ~ 26187631 (-)
fign fign,LOC107730568,LOC107722902,LOC107677893,LOC107674765,LOC107600675 other upstream 809527 26272376 ~ 26331126 (-)

Expression


Co-expression Network