LOC122351844 (sf3b1,LOC107731751,LOC107659892,LOC107719800,LOC107690614,LOC107595847,LOC107569635)


Basic Information

Item Value
gene id LOC122351844
gene name sf3b1,LOC107731751,LOC107659892,LOC107719800,LOC107690614,LOC107595847,LOC107569635
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12777570 ~ 12787437 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249201.1
CATGCGCCTTGTTTGTGCCGCAGGGGACGCGCCTGCGCGTTCTCGTGAGCGCAGCGGAGTCGGATGTGCAGTCAAAGGCCTTCCGGTACTGAGGTTCACACAACAGAAGGAAAATGGCGCAGATCGCCAAAACACATGACGacattgaGGCTCAGATCCTGGAAATCCAGGGGATGAAAGCTGCCCTGGTGGAGGGAGCAGAGCAGGGGGTTGGGCTCGATTCCACTGGATATTATGACCAAGAGATCTACGGAGGCAGCGATAGCCGCTTTGCTGGCTATGTGACATCGATTGCTGCCAATGAGCAGGAGGATgaTGATGAGGAAGATTCGTCCACGAGTCTGCTTGGACAGAAGAAACCAGGATACCATGCACCGGTTGCAATACTCAATTCCATTCCTCAATCAGATGAGCAGTACGATCCCTTTGCTGAACACCGACCACAGAAGATTTCAGACCGTGAGGATGAGTACAAGAAACGCAGACAAAAGATGATCATCTCCCCAGAGCGTCACGACCCATTTGCTGATGGGGGCAAAACGCCGGATCCCAAGATGCAGGTCAGGACATACATGGATGTTATGAAGGAGCAGCATCTGTCCAAAGAAGAGAGAGAGATCAGGCTGCAGATGGTAGAGAAAGCAAAGTCTGGAGAGCTGAAAGCAGTGAACGGCTCTGCTGCATCTCAGGCTGCTGGGGCCAAACGCAAACGACGCTGGGACCAGACAGCTGACCAAACCCCCAGTAATACCACACCCAGAAAAGTGTCCAGCTGGGACCAGGCAGATGCGGGTCCCGAAACACCAGGACACACACCTTCCAACAGTCGCTGGGATGAGACACCCGGGCGCCCCAAAGGTAGCGAGACCCCGGGAGCTACTCCAAGCACCCGTATGTGGGAACCCACACCAAGCCACACCCCAGCTGGAGCCGCAACACCAGGTCGAGACACTCCTGGACACGCCACTCCTGGCCACGGAGGGGCTACTTCCAGTGTGCGCAAGAACCGCTGGGATGAAACaccaaagacagagagagagacaCCTGGTCATGGCAGTGGCTGGGCTGAGACTCCACGTACAGACAGAGGAGATGAGTCAGTGGGTGAGACGCCCACCCCAGGTGCTAGCAAGAGGAAGTCAAGATGGGATGAGACACCAGCCAGTCAGATGGGCTCTTCAACTCCTCTGCTCACCCCTGGAAAAACCCCTCTGGGCACACCTGCTATGAATATGGCCACACCCACTCCAGGTCACCTGATGAGCATGACTCCAGAACAGCTGCAGGCTTGGCGCTGGGAGCGAGAGATTGACGAGAGGAATCGTCCACTGACTGATGAGGAGCTTGATGCCATGTTTCCAGAAGGATACAAAGTACTGCCACCACCAGCAGGCTATGTACCCATCCGTACCCCAGCACGTAAATTAGCTGCCACCCCCACCCCCATCGGAGGCATGACAGGCTTCCACATGCAAACAGAGGACCGATCTATGAAACAAGTCAACGATCAACCCTCTGGAAACCTGCCCTTCCTCAAGCCAGATGACATTCAGTACTTTGATAAACTGTTGGTCGAAGTTGATGAGTCCACCCTCAGTCCAGAAGAACAGAAGGAGCGCAAGATCATGAAGCTTCTCTTAAAGATCAAGAATGGGACACCTCCCATGAGAAAGGCTGCCCTCCGTCAAATCACAGACAAAGCCAGGGAGTTTGGTGCAGGACCACTCTTTAACCAGATCCTACCATTGCTGATGTCTCCTACACTGGAGGACCAGGAGCGTCATCTCTTGGTTAAAGTCATTGATCGTATCCTCTACAAACTTGATGACTTGGTTCGACCATATGTCCACAAGATTCTTGTGGTCATTGAACCCTTGCTGATTGATGAAGATTACTACGCTAGAGTAGAGGGTAGAGAGATCATCTCCAACTTGGCAAAAGCTGCTGGTCTGGCCACTATGATCTCCACCATGAGGCCTGATATTGACAACATGGACGAGTATGTGAGAAACACAACAGCTCGTGCTTTCGCTGTTGTAGCATCTGCCCTCGGCATTCCATCTCTCCTGCCTTTCCTCAAGGCTGTTTGCAAGAGCAAGAAATCCTGGCAGGCTCGTCACACGGGTATCAAGATCGTACAGCAGATCGCTATTCTCATGGGCTGTGCTATCCTGCCCCATCTCCGCAGCTTGGTGGAGATTATTGAGCATGgtCTCGTGGATGAGCAGCAGAAAGTGCGAACCATTAGTGCTCTGGCTATCGCTGCCCTGGCTGAAGCTGCTACACCATATGGTATCGAGTCCTTTGATTCTGTACTAAAACCTCTCTGGAAAGGTATCAGGCAACACAGAGGCAAGGGTCTTGCTGCCTTCTTGAAAGCCATTGGATACTTGATTCCTCTTATGGATGCTGAATATGCCAACTATTACACCAGAGAAGTGATGCTTATCCTTATTCGAGAGTTCCAGTCACCTGATGAGGAAATGAAGAAGATTGTCCTCaaggTGGTGAAGCAGTGCTGTGGCACAGATGGTGTGGAAgccaattacattaaaacagagATTTTGCCCCcctttttcaaacatttctggCAGCACCGAATGGCATTGGATAGGCGCAACTACAGACAGTTAGTGGACACTACAGTGGAGCTGGCCAATAAGGTCGGGGCAGCTGAGATTATTTCCCGCATCGTGGATGATTTAAAGGATGAAGCTGAGCAGTACAGAAAAATGGTCATGGAGACTATTGAGAAAATTATGGGAAACCTTGGTGCCGCTGACATCGATCACAAACTGGAGGAGCAGCTTATTGATGGAATCCTGTACGCTTTTCAGGAACAGACCACTGAAGACTCTGTGATGCTAAATGGCTTCGGTACGGTGGTAAATGCTCTGGGTAAGAGAGTAAAACCGTACTTGCCTCAGATCTGCGGTACAGTGCTGTGGCGTCTCAACAACAAATCCGCCAAAGTCCGTCAACAGGCTGCTGACCTGATTTCTCGCACAGCGGTGGTCATGAAGACATGCCAGGAGgAAAAGCTGATGGGCCATTTGGGTGTGGTGTTATACGAGTATCTGGGAGAAGAATACCCAGAAGTGCTGGGTAGCATTCTTGGAGCCCTTAAAGCTATTGTCAATGTTATTGGTATGCACAAGATGACACCACCTATCAAAGACTTGCTTCCACGATTGACTCCCATCTTAAAGAACAGACATGAGAAGGTGCAGGAGAACTGCATTGATCTAGTGGGCAGAATCGCTGATAGGGGTGCAGAGTATGTGTCTGCCAGGGAATGGATGCGCATCTGTTTTGAATTGCTGGAGTTGTTGAAAGCCCACAAGAAGGCCATTCGCAGAGCTACTGTCAATACTTTCGGCTACATCGCCAAGGCCATTGGTCCTCACGATGTGCTGGCCACGCTGCTCAACAATCTGAAGGTTCAGGAGCGTCAGAACCGTGTGTGCACAACGGTAGCCATTGCTATCGTGGCTGAGACGTGTTCGCCATTCACCGTGCTTCCTGCGTTGATGAACGAATACCGTGTTCCTGAACTTAATGTTCAGAATGGTGTCCTAAAGTCTTTGTCCTTCCTGTTCGAGTACATTGGTGAAATGGGTAAAGATTATATCTATGCGGTCACACCTTTGTTGGAGGATGCTCTGATGGACAGGGATCTTGTACACAGGCAGACTGCCAGTGCTGTGGTGCAGCATATGTCTCTGGGAGTGTATGGCTTTGGCTGTGAAGATTCTCTCAATCATTTGCTCAACTATGTTTGGCCAAATGTCTTTGAAACGTCTCCTCACGTCATCCAGGCTGTCATGGGGGCCCTAGAGGGTCTGCGGGTAGCAATCGGGCCCTGCCGGATGCTGCAGTACTGCTTGCAGGGGTTGTTCCATCCTGCTCGTAAAGTGCGTGACGTGTACTGGAAGATCTACAACTCCATCTACATTGGCTCCCAGGATGCACTGATCGCACATTATCCGCTTGTCTACAATGATGAGAAGAACTCGTATGTTCGCTATGAGCTGGAGTACTTCCTGTGAATATAACTACCCTTACATGtgcactctctcttttctcctaTATCTGTCTAATTCATGGTTTATAGGACTTggtccactttttttttatgttccctGGTAGGTTACAACCAGTACCACAGATTCTGCGGTCTaaaatttatttcttattaaagaacagaaaaatgtcgaaaaaaagaatgttaaaCGTGATGCTTTTAGGTCTTTGGATTagacttttctgtttttacagcGTGGCACCATGcacagtgacagtaaagatagtAGCAGAGTTTCTGAGGAATGTGATTTATCTTCAGTAAATCTTTTAACTAGAGACTTGTGTCCTGATCTGTCAAGTCCACTCTCTTGCTCAGTCACACATCTGTTCTTATAATGTTGCTTAGTTTGGCTGAATAAACATTTGTGTATTAAAAGTCA
>XM_043249202.1
TGGTAtgctattgtgtgtgtgagttcaaACCCTTTTCCAAAGTGTTACTAATGGTAAAGAGAAATTTTCTAGGCTTCTTTTCTGCCGGTTGAAGTCTGACTGCAGAGGGACCCTTGGCACTGAAAGTGGGGCAAAACGCCGGATCCCAAGATGCAGGTCAGGACATACATGGATGTTATGAAGGAGCAGCATCTGTCCAAAGAAGAGAGAGAGATCAGGCTGCAGATGGTAGAGAAAGCAAAGTCTGGAGAGCTGAAAGCAGTGAACGGCTCTGCTGCATCTCAGGCTGCTGGGGCCAAACGCAAACGACGCTGGGACCAGACAGCTGACCAAACCCCCAGTAATACCACACCCAGAAAAGTGTCCAGCTGGGACCAGGCAGATGCGGGTCCCGAAACACCAGGACACACACCTTCCAACAGTCGCTGGGATGAGACACCCGGGCGCCCCAAAGGTAGCGAGACCCCGGGAGCTACTCCAAGCACCCGTATGTGGGAACCCACACCAAGCCACACCCCAGCTGGAGCCGCAACACCAGGTCGAGACACTCCTGGACACGCCACTCCTGGCCACGGAGGGGCTACTTCCAGTGTGCGCAAGAACCGCTGGGATGAAACaccaaagacagagagagagacaCCTGGTCATGGCAGTGGCTGGGCTGAGACTCCACGTACAGACAGAGGAGATGAGTCAGTGGGTGAGACGCCCACCCCAGGTGCTAGCAAGAGGAAGTCAAGATGGGATGAGACACCAGCCAGTCAGATGGGCTCTTCAACTCCTCTGCTCACCCCTGGAAAAACCCCTCTGGGCACACCTGCTATGAATATGGCCACACCCACTCCAGGTCACCTGATGAGCATGACTCCAGAACAGCTGCAGGCTTGGCGCTGGGAGCGAGAGATTGACGAGAGGAATCGTCCACTGACTGATGAGGAGCTTGATGCCATGTTTCCAGAAGGATACAAAGTACTGCCACCACCAGCAGGCTATGTACCCATCCGTACCCCAGCACGTAAATTAGCTGCCACCCCCACCCCCATCGGAGGCATGACAGGCTTCCACATGCAAACAGAGGACCGATCTATGAAACAAGTCAACGATCAACCCTCTGGAAACCTGCCCTTCCTCAAGCCAGATGACATTCAGTACTTTGATAAACTGTTGGTCGAAGTTGATGAGTCCACCCTCAGTCCAGAAGAACAGAAGGAGCGCAAGATCATGAAGCTTCTCTTAAAGATCAAGAATGGGACACCTCCCATGAGAAAGGCTGCCCTCCGTCAAATCACAGACAAAGCCAGGGAGTTTGGTGCAGGACCACTCTTTAACCAGATCCTACCATTGCTGATGTCTCCTACACTGGAGGACCAGGAGCGTCATCTCTTGGTTAAAGTCATTGATCGTATCCTCTACAAACTTGATGACTTGGTTCGACCATATGTCCACAAGATTCTTGTGGTCATTGAACCCTTGCTGATTGATGAAGATTACTACGCTAGAGTAGAGGGTAGAGAGATCATCTCCAACTTGGCAAAAGCTGCTGGTCTGGCCACTATGATCTCCACCATGAGGCCTGATATTGACAACATGGACGAGTATGTGAGAAACACAACAGCTCGTGCTTTCGCTGTTGTAGCATCTGCCCTCGGCATTCCATCTCTCCTGCCTTTCCTCAAGGCTGTTTGCAAGAGCAAGAAATCCTGGCAGGCTCGTCACACGGGTATCAAGATCGTACAGCAGATCGCTATTCTCATGGGCTGTGCTATCCTGCCCCATCTCCGCAGCTTGGTGGAGATTATTGAGCATGgtCTCGTGGATGAGCAGCAGAAAGTGCGAACCATTAGTGCTCTGGCTATCGCTGCCCTGGCTGAAGCTGCTACACCATATGGTATCGAGTCCTTTGATTCTGTACTAAAACCTCTCTGGAAAGGTATCAGGCAACACAGAGGCAAGGGTCTTGCTGCCTTCTTGAAAGCCATTGGATACTTGATTCCTCTTATGGATGCTGAATATGCCAACTATTACACCAGAGAAGTGATGCTTATCCTTATTCGAGAGTTCCAGTCACCTGATGAGGAAATGAAGAAGATTGTCCTCaaggTGGTGAAGCAGTGCTGTGGCACAGATGGTGTGGAAgccaattacattaaaacagagATTTTGCCCCcctttttcaaacatttctggCAGCACCGAATGGCATTGGATAGGCGCAACTACAGACAGTTAGTGGACACTACAGTGGAGCTGGCCAATAAGGTCGGGGCAGCTGAGATTATTTCCCGCATCGTGGATGATTTAAAGGATGAAGCTGAGCAGTACAGAAAAATGGTCATGGAGACTATTGAGAAAATTATGGGAAACCTTGGTGCCGCTGACATCGATCACAAACTGGAGGAGCAGCTTATTGATGGAATCCTGTACGCTTTTCAGGAACAGACCACTGAAGACTCTGTGATGCTAAATGGCTTCGGTACGGTGGTAAATGCTCTGGGTAAGAGAGTAAAACCGTACTTGCCTCAGATCTGCGGTACAGTGCTGTGGCGTCTCAACAACAAATCCGCCAAAGTCCGTCAACAGGCTGCTGACCTGATTTCTCGCACAGCGGTGGTCATGAAGACATGCCAGGAGgAAAAGCTGATGGGCCATTTGGGTGTGGTGTTATACGAGTATCTGGGAGAAGAATACCCAGAAGTGCTGGGTAGCATTCTTGGAGCCCTTAAAGCTATTGTCAATGTTATTGGTATGCACAAGATGACACCACCTATCAAAGACTTGCTTCCACGATTGACTCCCATCTTAAAGAACAGACATGAGAAGGTGCAGGAGAACTGCATTGATCTAGTGGGCAGAATCGCTGATAGGGGTGCAGAGTATGTGTCTGCCAGGGAATGGATGCGCATCTGTTTTGAATTGCTGGAGTTGTTGAAAGCCCACAAGAAGGCCATTCGCAGAGCTACTGTCAATACTTTCGGCTACATCGCCAAGGCCATTGGTCCTCACGATGTGCTGGCCACGCTGCTCAACAATCTGAAGGTTCAGGAGCGTCAGAACCGTGTGTGCACAACGGTAGCCATTGCTATCGTGGCTGAGACGTGTTCGCCATTCACCGTGCTTCCTGCGTTGATGAACGAATACCGTGTTCCTGAACTTAATGTTCAGAATGGTGTCCTAAAGTCTTTGTCCTTCCTGTTCGAGTACATTGGTGAAATGGGTAAAGATTATATCTATGCGGTCACACCTTTGTTGGAGGATGCTCTGATGGACAGGGATCTTGTACACAGGCAGACTGCCAGTGCTGTGGTGCAGCATATGTCTCTGGGAGTGTATGGCTTTGGCTGTGAAGATTCTCTCAATCATTTGCTCAACTATGTTTGGCCAAATGTCTTTGAAACGTCTCCTCACGTCATCCAGGCTGTCATGGGGGCCCTAGAGGGTCTGCGGGTAGCAATCGGGCCCTGCCGGATGCTGCAGTACTGCTTGCAGGGGTTGTTCCATCCTGCTCGTAAAGTGCGTGACGTGTACTGGAAGATCTACAACTCCATCTACATTGGCTCCCAGGATGCACTGATCGCACATTATCCGCTTGTCTACAATGATGAGAAGAACTCGTATGTTCGCTATGAGCTGGAGTACTTCCTGTGAATATAACTACCCTTACATGtgcactctctcttttctcctaTATCTGTCTAATTCATGGTTTATAGGACTTggtccactttttttttatgttccctGGTAGGTTACAACCAGTACCACAGATTCTGCGGTCTaaaatttatttcttattaaagaacagaaaaatgtcgaaaaaaagaatgttaaaCGTGATGCTTTTAGGTCTTTGGATTagacttttctgtttttacagcGTGGCACCATGcacagtgacagtaaagatagtAGCAGAGTTTCTGAGGAATGTGATTTATCTTCAGTAAATCTTTTAACTAGAGACTTGTGTCCTGATCTGTCAAGTCCACTCTCTTGCTCAGTCACACATCTGTTCTTATAATGTTGCTTAGTTTGGCTGAATAAACATTTGTGTATTAAAAGTCA
>XM_043249203.1
GAGTACAAGAAACGCAGACAAAAGATGATCATCTCCCCAGAGCGTCACGACCCATTTGCTGATGGCTTCTTTTCTGCCGGTTGAAGTCTGACTGCAGAGGGACCCTTGGCACTGAAAGTGGGGCAAAACGCCGGATCCCAAGATGCAGGTCAGGACATACATGGATGTTATGAAGGAGCAGCATCTGTCCAAAGAAGAGAGAGAGATCAGGCTGCAGATGGTAGAGAAAGCAAAGTCTGGAGAGCTGAAAGCAGTGAACGGCTCTGCTGCATCTCAGGCTGCTGGGGCCAAACGCAAACGACGCTGGGACCAGACAGCTGACCAAACCCCCAGTAATACCACACCCAGAAAAGTGTCCAGCTGGGACCAGGCAGATGCGGGTCCCGAAACACCAGGACACACACCTTCCAACAGTCGCTGGGATGAGACACCCGGGCGCCCCAAAGGTAGCGAGACCCCGGGAGCTACTCCAAGCACCCGTATGTGGGAACCCACACCAAGCCACACCCCAGCTGGAGCCGCAACACCAGGTCGAGACACTCCTGGACACGCCACTCCTGGCCACGGAGGGGCTACTTCCAGTGTGCGCAAGAACCGCTGGGATGAAACaccaaagacagagagagagacaCCTGGTCATGGCAGTGGCTGGGCTGAGACTCCACGTACAGACAGAGGAGATGAGTCAGTGGGTGAGACGCCCACCCCAGGTGCTAGCAAGAGGAAGTCAAGATGGGATGAGACACCAGCCAGTCAGATGGGCTCTTCAACTCCTCTGCTCACCCCTGGAAAAACCCCTCTGGGCACACCTGCTATGAATATGGCCACACCCACTCCAGGTCACCTGATGAGCATGACTCCAGAACAGCTGCAGGCTTGGCGCTGGGAGCGAGAGATTGACGAGAGGAATCGTCCACTGACTGATGAGGAGCTTGATGCCATGTTTCCAGAAGGATACAAAGTACTGCCACCACCAGCAGGCTATGTACCCATCCGTACCCCAGCACGTAAATTAGCTGCCACCCCCACCCCCATCGGAGGCATGACAGGCTTCCACATGCAAACAGAGGACCGATCTATGAAACAAGTCAACGATCAACCCTCTGGAAACCTGCCCTTCCTCAAGCCAGATGACATTCAGTACTTTGATAAACTGTTGGTCGAAGTTGATGAGTCCACCCTCAGTCCAGAAGAACAGAAGGAGCGCAAGATCATGAAGCTTCTCTTAAAGATCAAGAATGGGACACCTCCCATGAGAAAGGCTGCCCTCCGTCAAATCACAGACAAAGCCAGGGAGTTTGGTGCAGGACCACTCTTTAACCAGATCCTACCATTGCTGATGTCTCCTACACTGGAGGACCAGGAGCGTCATCTCTTGGTTAAAGTCATTGATCGTATCCTCTACAAACTTGATGACTTGGTTCGACCATATGTCCACAAGATTCTTGTGGTCATTGAACCCTTGCTGATTGATGAAGATTACTACGCTAGAGTAGAGGGTAGAGAGATCATCTCCAACTTGGCAAAAGCTGCTGGTCTGGCCACTATGATCTCCACCATGAGGCCTGATATTGACAACATGGACGAGTATGTGAGAAACACAACAGCTCGTGCTTTCGCTGTTGTAGCATCTGCCCTCGGCATTCCATCTCTCCTGCCTTTCCTCAAGGCTGTTTGCAAGAGCAAGAAATCCTGGCAGGCTCGTCACACGGGTATCAAGATCGTACAGCAGATCGCTATTCTCATGGGCTGTGCTATCCTGCCCCATCTCCGCAGCTTGGTGGAGATTATTGAGCATGgtCTCGTGGATGAGCAGCAGAAAGTGCGAACCATTAGTGCTCTGGCTATCGCTGCCCTGGCTGAAGCTGCTACACCATATGGTATCGAGTCCTTTGATTCTGTACTAAAACCTCTCTGGAAAGGTATCAGGCAACACAGAGGCAAGGGTCTTGCTGCCTTCTTGAAAGCCATTGGATACTTGATTCCTCTTATGGATGCTGAATATGCCAACTATTACACCAGAGAAGTGATGCTTATCCTTATTCGAGAGTTCCAGTCACCTGATGAGGAAATGAAGAAGATTGTCCTCaaggTGGTGAAGCAGTGCTGTGGCACAGATGGTGTGGAAgccaattacattaaaacagagATTTTGCCCCcctttttcaaacatttctggCAGCACCGAATGGCATTGGATAGGCGCAACTACAGACAGTTAGTGGACACTACAGTGGAGCTGGCCAATAAGGTCGGGGCAGCTGAGATTATTTCCCGCATCGTGGATGATTTAAAGGATGAAGCTGAGCAGTACAGAAAAATGGTCATGGAGACTATTGAGAAAATTATGGGAAACCTTGGTGCCGCTGACATCGATCACAAACTGGAGGAGCAGCTTATTGATGGAATCCTGTACGCTTTTCAGGAACAGACCACTGAAGACTCTGTGATGCTAAATGGCTTCGGTACGGTGGTAAATGCTCTGGGTAAGAGAGTAAAACCGTACTTGCCTCAGATCTGCGGTACAGTGCTGTGGCGTCTCAACAACAAATCCGCCAAAGTCCGTCAACAGGCTGCTGACCTGATTTCTCGCACAGCGGTGGTCATGAAGACATGCCAGGAGgAAAAGCTGATGGGCCATTTGGGTGTGGTGTTATACGAGTATCTGGGAGAAGAATACCCAGAAGTGCTGGGTAGCATTCTTGGAGCCCTTAAAGCTATTGTCAATGTTATTGGTATGCACAAGATGACACCACCTATCAAAGACTTGCTTCCACGATTGACTCCCATCTTAAAGAACAGACATGAGAAGGTGCAGGAGAACTGCATTGATCTAGTGGGCAGAATCGCTGATAGGGGTGCAGAGTATGTGTCTGCCAGGGAATGGATGCGCATCTGTTTTGAATTGCTGGAGTTGTTGAAAGCCCACAAGAAGGCCATTCGCAGAGCTACTGTCAATACTTTCGGCTACATCGCCAAGGCCATTGGTCCTCACGATGTGCTGGCCACGCTGCTCAACAATCTGAAGGTTCAGGAGCGTCAGAACCGTGTGTGCACAACGGTAGCCATTGCTATCGTGGCTGAGACGTGTTCGCCATTCACCGTGCTTCCTGCGTTGATGAACGAATACCGTGTTCCTGAACTTAATGTTCAGAATGGTGTCCTAAAGTCTTTGTCCTTCCTGTTCGAGTACATTGGTGAAATGGGTAAAGATTATATCTATGCGGTCACACCTTTGTTGGAGGATGCTCTGATGGACAGGGATCTTGTACACAGGCAGACTGCCAGTGCTGTGGTGCAGCATATGTCTCTGGGAGTGTATGGCTTTGGCTGTGAAGATTCTCTCAATCATTTGCTCAACTATGTTTGGCCAAATGTCTTTGAAACGTCTCCTCACGTCATCCAGGCTGTCATGGGGGCCCTAGAGGGTCTGCGGGTAGCAATCGGGCCCTGCCGGATGCTGCAGTACTGCTTGCAGGGGTTGTTCCATCCTGCTCGTAAAGTGCGTGACGTGTACTGGAAGATCTACAACTCCATCTACATTGGCTCCCAGGATGCACTGATCGCACATTATCCGCTTGTCTACAATGATGAGAAGAACTCGTATGTTCGCTATGAGCTGGAGTACTTCCTGTGAATATAACTACCCTTACATGtgcactctctcttttctcctaTATCTGTCTAATTCATGGTTTATAGGACTTggtccactttttttttatgttccctGGTAGGTTACAACCAGTACCACAGATTCTGCGGTCTaaaatttatttcttattaaagaacagaaaaatgtcgaaaaaaagaatgttaaaCGTGATGCTTTTAGGTCTTTGGATTagacttttctgtttttacagcGTGGCACCATGcacagtgacagtaaagatagtAGCAGAGTTTCTGAGGAATGTGATTTATCTTCAGTAAATCTTTTAACTAGAGACTTGTGTCCTGATCTGTCAAGTCCACTCTCTTGCTCAGTCACACATCTGTTCTTATAATGTTGCTTAGTTTGGCTGAATAAACATTTGTGTATTAAAAGTCA

Function

symbol description
sf3b1 Predicted to enable mRNA binding activity. Acts upstream of or within several processes, including hemopoiesis; melanocyte differentiation; and neural crest cell development. Predicted to be located in nucleus. Predicted to be part of U2 snRNP and spliceosomal complex. Is expressed in brain; neural tube; and trunk. Human ortholog(s) of this gene implicated in hepatocellular carcinoma and myelodysplastic syndrome. Orthologous to human SF3B1 (splicing factor 3b subunit 1).

NR:

description
PREDICTED: splicing factor 3B subunit 1 isoform X1

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process
GO:0014032 neural crest cell development biological_process
GO:0030318 melanocyte differentiation biological_process

KEGG:

id description
K12828 SF3B1, SAP155; splicing factor 3B subunit 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249201.1 True 4466 mRNA 0.50 25 12777570 12787437
XM_043249202.1 False 4062 mRNA 0.49 22 12780434 12787437
XM_043249203.1 False 4054 mRNA 0.49 23 12778913 12787437

Neighbor

gene id symbol gene type direction distance location
LOC122352187 NA coding upstream 46608 12730836 ~ 12730962 (+)
dnah7 dnah7 coding upstream 158148 12562459 ~ 12619422 (+)
rubcnl rubcnl,LOC107709411,LOC107673128 coding upstream 217176 12554613 ~ 12560394 (+)
esd esd,LOC107675365,LOC107601075,LOC107709410,LOC107724032 coding upstream 259501 12514296 ~ 12518069 (+)
htr2aa htr2a,htr2aa,LOC107673120,LOC107709424,LOC107601068,LOC107724025,LOC107675342 coding upstream 270083 12482174 ~ 12507487 (+)
LOC122351846 ankrd44,LOC107719801,LOC107659898,LOC107595853 coding downstream 1853 12789290 ~ 12811475 (+)
tmeff2a tmeff2a,tmeff2,LOC107728299,LOC107670719,LOC107675359 coding downstream 248456 13035893 ~ 13090342 (+)
cavin2a sdpra,LOC107728296,LOC107670717,LOC107555844,LOC107675358,LOC107601077,LOC107718373 coding downstream 306715 13094152 ~ 13106211 (+)
trnas-cga_5 NA coding downstream 320978 13108415 ~ 13108496 (+)
nabp1a nabp1a,nabp1,LOC107728291,LOC107670711,LOC107718374,LOC107555843 coding downstream 321780 13109217 ~ 13112949 (+)
G69718 NA non-coding upstream 3720 12773334 ~ 12773850 (+)
G69706 NA non-coding upstream 52730 12665012 ~ 12724840 (+)
G69659 LOC107709425,LOC107724026 non-coding upstream 250697 12518289 ~ 12526873 (+)
G69625 NA non-coding upstream 320072 12457264 ~ 12457498 (+)
G69578 NA non-coding upstream 455038 12322251 ~ 12322532 (+)
G69723 NA non-coding downstream 50282 12837719 ~ 12840151 (+)
G69783 NA non-coding downstream 318843 13106280 ~ 13106757 (+)
G69789 NA non-coding downstream 320158 13107595 ~ 13107832 (+)
G69796 stk17b non-coding downstream 342661 13130098 ~ 13133839 (+)
G69985 NA non-coding downstream 728252 13515689 ~ 13518237 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other upstream 148035 12627535 ~ 12629535 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other upstream 325205 12434988 ~ 12452365 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other upstream 621766 12046499 ~ 12155804 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other upstream 1287421 11465604 ~ 11490149 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other upstream 1747161 11021736 ~ 11030409 (+)
G69755 NA other downstream 197431 12984868 ~ 12985978 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other downstream 502256 13289693 ~ 13304591 (+)
ccnt2a ccnt2a,LOC107658298,LOC107725237,LOC107723659,LOC107684218,LOC107555058,LOC107555362 other downstream 888726 13676163 ~ 13684835 (+)
LOC122351767 NA other downstream 1799645 14587082 ~ 14589439 (+)
si:ch211-168k14.2 si:ch211-168k14.2,LOC107681321,LOC107748618,LOC108441415,LOC105905900,LOC108266656,LOC107600399 other downstream 2613690 15401127 ~ 15425361 (+)

Expression


Co-expression Network