LOC122351846 (ankrd44,LOC107719801,LOC107659898,LOC107595853)


Basic Information

Item Value
gene id LOC122351846
gene name ankrd44,LOC107719801,LOC107659898,LOC107595853
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12789290 ~ 12811475 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249204.1
CTATAACGAATGAATACATTACGCAGAACATAAGCGAGAGGGATATAATATCTGAAAACGGTATCGCTGTGGATGCCACTGCTGTAAATGCGGATTGTTTACAGCAGCCCTCGCATCCTTTCCTCCCTCCCCTTTTCCTCTTTCCCGGAGCGCCGGAGCGCTGGTGGCGAGGCAGCGGCTAAAGCAGCCGCCGCTGACCGAAGATAGCGCCTGCAGAGCCGGCCACGGCCGACACATCACCCCGGGCCCCTGGAGGGTGCGATCCGGAGCAAAGCAGGAAGCAAGCTTTTGATGCCACATCATTGTGCAGCATCGTTCTTCCGTGAAGAAAAGCGCACAGCCACTTCTGGATTTTATTAATCTTCACCTCCAGGTCTTTTCAGGAGTTTGGATGTGCAGTTTCACATGATATGGCTGTTCTTAAACTAGTCGACCAGCCACCCCTCGTCCAAGCCATCTTTAATGGAGACCCCGATGAGATTCGTGTGCTCATATGTAAATCAGAAGACGTCAATGCACTGgATGCTGAGAAGCGAGCTCCTCTTCATGCAGCAGCCTTCCTCGGAGATGCTGAGATCACAGAGCTCCTCATTGTGTCAGGGGCGCGGGTCAATGCCAAAGACAACATGTGGTTGACTCCACTCCACAGGGCAGTGGCATCACGTAGCGAGGAGGCCGTTCGCGTGTTGATCCGTCATTCTGCTGACGTTAACGCACGGGATAAGAACTGGCAGACTCCGTTGCATGTTGCTGCCGCCAACAAGGCCCTGCGCTGCGCAGAGGTCATCATCCCGCTCCTGAGCAGCGTCAATGTTTCAGATCGCGGGGGACGCACCGCCCTGCACCACGCTGCCCTTAATGGGCACACAGAGATGGTTAGCCTTCTTCTggccaagggtgccaatatcaATGCCTTTGACAAGAAAGACTGCCGTGCACTGCACTGGGCGGCATATATGGGTCACTTAGATGTAGTGTGTTTACTGGTGAGTCAAGGGGCTGAGATCAGCTCCAAGGACAAAAGAGGATACACACCTCTACATGCTGCTGCTTCCAACGGTCAGATTGCTGTGGTGAAACACTTGCTCAGTCTGGCTGTAGAGATAGATGAAGCCAATGCCTTTGGGAACACCGCGCTGCATGTGGCCTGCTTTAATGGACAAGATGCAGTAGTCAGTGAGCTGATCGATTACGGTGCTAATGTCAGTCAGCCGAATAACAAGGGCTTCACACCTCTGCACTTCGCTGCAGCTTCCACTCACGGTGCCCTGTGTCTGGAGTTCCTGGTCAACAGCGGAGCTGATGTCAATGTCCAAAGTCGCGATGGGAAAAGCCCTCTTCATCTGACAGCAGTTCATGGACGATTCACACGCTCTCAGACGCTCATCCAAAACGGTGGAGAGATTGACTGTGTTGATAAGGATGGAAACACTCCCCTTCATGTTGCTGCTCGATACGGACATGAACTTTTAATAAACACTCTAATCACAAGCGGAGCTGACTGCACCAGAAGAGGAATACATGGCATGTTTCCTTTACATCTGGCCGCTCTGAATGCTCATGCCGACTGCTGCCGAAAGCTTCTTTCCTCAGGCTTCCAAATCGATACTCCAGACAACCTGGGGAGGACGTGTCTGCATGCCGCAGCTGCAGGCGGTAATGTGGAGTGTGTGAAGCTATTACTCAGCAGTGGAGCTGATCATAACCGCAGAGACAAACATGGAAGGACCCCTCTCCACTATGCGGCAGCTAGTCGACACTTTCAGTGCCTGGAGACTTTGGTGTCCTGCGGTACCTGCATTAATGCCACTGACCAGTGGGGGCGCTCTGCTGTGCACTACGCTGCTGCTTCTGACCTGGACAGGAGGCGGCGTGTGGTCCTGGAACCAGAGAGTGACGGAGTTCAAGCTGAGAGGGAGAAGGAGGCAGCTCTgTGTCTTGAGTTCCTGTTGCAGAATGGTGCTGGCCCATCACTCAAAGATAAACAAGGCTACAGTGCTGTTCATTATGCTGCAGCTTACGGCCACAGACACTGTCTGAAACTGcttttggaCAGAGATGAGAGCCAACAAGATGAGATGGAGAACAGCCAAACCAGAAGCCCACTGCATCTAGCCGCATACCATGGTCACGCACAAGCTCTAGAAGTGCTCTTGGAGGGTCACTGTGAGGTGGATCAGGGTGATGAGGTGGGTCGGACTCCACTGGCACTCGCCTCCCTCAGGGGCCACACTGACTGCGCTCTCACGCTTCTGAATCACGGGGCCTCGCCAAGAAGCAAAGATACTACTCGAGGACGAACACCAATCCACCTCGCAGTAATGAATGGTCATACATCTTGTGTGCGCCTCCTGCTGGAAGACTCTGATAATGCAGATCTGGTAGATACAGCGGACTCTCAGGGACAGACCCCTCTAATGCTGGCAGTAATTGGGGGTCATGTGGATGCTGTGTCTCTTCTATTGGAGCGCGAGGCCAGTGTGGACTTGGCTGATCATCAGGGTCTGACCGGTCTGCACCTGGGGGTGAGTTTTCTGATCTTGTCAAACGTATTCAAGTGCAAGATGTACCAGAGCTTTTTTTTTNTGTTGGAGCTGGAGGCATCCGTGCTGCTGGGGGACTCCAGGGGTCGGACAGCAATCCACTTGGCTGCAGCGAGAGGTCACGCTTCCTGGTTGAGCGAATTACTCAATATTGCATGTTCTGAACCCCCGATACCTCCATTACGAGACAACCATGGATACACACCCTTACACTGGGCCTGTTACTACGGTCACGATGGTTGTGTCGAGGTCTTACTCGAACAAAGAGATTTCCATCACTTCGATGGGAACCCCTTCACCCCGCTGCATTGTGCTGTGGTCAATGACCATGAGACCTGtgccaatattttattagaagcCATGGGAACAAAGATCGTAACTTGCAAAGACTCCAAGGGCAGGACACCTCTCCATGCAGCTGCATTTGCTGGCCACATAGACTGTGTTCAGCTGCTTCTGGCCCATAATGCATCTGTGGATGACATTGACCAATCAGGGTGCAGTGCCCTGATTATGGCAGCGGAGAAAGGAAGAGTCGAAGTTGTAGAGGCTCTACTTACTAGTGCCAATGTGAACCTCAGTCTGACTGACCAGAAGGGCAATACAGCACTCCATCTAGCCTGCAGTAACGGAATGGAGGAATGTGCATTGCTCATTCTTGGAAAACTTCCAGACTCTGCCCTCGTCGCTACAAACACTGCACTGCAAACACCTCTTCATTTGGCTGCTCGCAGCGGGATGAAGCAGACAGTGCAAGAGCTGCTCTCTCGTGGGGCCAGTGTTCAAGTGCTAGATGAGAATGGTCTCACCCCTGCTCTGGCTTGCGCTCCCAGCAGGGAAGTGGCTGACTGCCTGCTCATTCTGGCTACCATGATGCCTTTCTGCTCCCCTTGCAGCTCTGGAGCTCCTTCGCCAGGCTCCCTGCTGAAATCTTTGCCCCGCCAGGCCAAGAGCCCCCAAGGCCCCCGCAGTCCAAGGGACCCCTCCGGCCCCTCCAGTGAGGGCACGACCACCGAAAACGACTCAGACTCAGAGACATTTTGACCCCGGCTCCTTTTAAATGCGCCGGTCGTAGTTTTGAACCTTACAGAAGTTGTACAGATTTTTGATTATGGAGCTCAGCCTCTATAACAAGAGATTATGACATATAGCACACACGGTACGCTTTTGTTCTGACACATTTGTTTGCACAGGAGATTTTTTCGAAAGCCATTTTAATCACTTTAACACAGGTTGATTGATGTTGGATTGCCAAATGTCGACTGACTTCTCACACTTGAACGATGATGATGTAATGTGCGGAGTGGTGTGTCTTGATCTGTGGATTTTTGAAAGCACAAACCCTGTGGAAGAACAAGGTGAAGTCACCCTCATTTCACCCATGTTGTCACTGTGGGACCAATCAGGAAACAAGAAATCACATTTTTGGAACAACAGGGGGAATTGGTGTCACTGTTACCAACCtcacttaatatttatttgtaagaaaGGTTGGAATACACCACACAACTTTTCCACAGATTTTTGCCCTGATTTTTGCATCGCAGATTTGACATCTCGCACGTTTCCgtgtaattttgttgtgttcgAACGACTTGAAATTCTAATGGTGTGTGATTATcagccatttaaaaatgttttgagattGGAAAAGTTGCGTAgtgtatttcagttttaagaCTAGTTAGACTTAAtgtgaaatgatgaaaaatgcaaCACAAGTTCTGCATTTCCGAAGTCGTACTTTACACATTATATCTGACATGTGAATAGAAGGCTCTTAAGATTCATATTGCAAAAAGAGCACTTTTATTCCATTGAGAAAACTAAATTTCTAGGCCTTGATGGTCTAAACTTGCGTTTGACGCTTTTGGAGAGTGACACTTTGCCACTCGGTTCCTTCTCAGACATAGAGACAGTGTTCAAATAATACTTCTATTCAGGTTGAATTTTAAATTCTAGTGAGAGAGCGTAGCATGTCATGTCAACCAGGATGTTTTCAAGCCTGTACcgatatttattaacatttagatAACAATGGTACTACAGTTGTATGCACTTACGTATAGGAGTAAATGGGTGtctgaaggaatagttcacctgtAGATTATAATTCTGCCATTGTTTACTCGTGTCATTGttttttgtggaacacaaaagtaaaattattgGAGAATCTTAATGTGGCTCTTTCCACACACCGATGCTATCGTCTGCCaagctccaaaaa

Function

symbol description
ankrd44 Orthologous to human ANKRD44 (ankyrin repeat domain 44).

NR:

description
PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like isoform X2

GO: NA

KEGG:

id description
K15503 ANKRD44; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249204.1 True 4773 mRNA 0.49 28 12789290 12811475

Neighbor

gene id symbol gene type direction distance location
LOC122351844 sf3b1,LOC107731751,LOC107659892,LOC107719800,LOC107690614,LOC107595847,LOC107569635 coding upstream 1853 12777570 ~ 12787437 (+)
LOC122352187 NA coding upstream 58328 12730836 ~ 12730962 (+)
dnah7 dnah7 coding upstream 169868 12562459 ~ 12619422 (+)
rubcnl rubcnl,LOC107709411,LOC107673128 coding upstream 228896 12554613 ~ 12560394 (+)
esd esd,LOC107675365,LOC107601075,LOC107709410,LOC107724032 coding upstream 271221 12514296 ~ 12518069 (+)
tmeff2a tmeff2a,tmeff2,LOC107728299,LOC107670719,LOC107675359 coding downstream 224418 13035893 ~ 13090342 (+)
cavin2a sdpra,LOC107728296,LOC107670717,LOC107555844,LOC107675358,LOC107601077,LOC107718373 coding downstream 282677 13094152 ~ 13106211 (+)
trnas-cga_5 NA coding downstream 296940 13108415 ~ 13108496 (+)
nabp1a nabp1a,nabp1,LOC107728291,LOC107670711,LOC107718374,LOC107555843 coding downstream 297742 13109217 ~ 13112949 (+)
c9h2orf69 zgc:153521,LOC107718378,LOC107675339,LOC107601069,LOC107555833 coding downstream 306804 13118279 ~ 13121043 (+)
G69718 NA non-coding upstream 15440 12773334 ~ 12773850 (+)
G69706 NA non-coding upstream 64450 12665012 ~ 12724840 (+)
G69659 LOC107709425,LOC107724026 non-coding upstream 262417 12518289 ~ 12526873 (+)
G69625 NA non-coding upstream 331792 12457264 ~ 12457498 (+)
G69578 NA non-coding upstream 466758 12322251 ~ 12322532 (+)
G69723 NA non-coding downstream 26244 12837719 ~ 12840151 (+)
G69783 NA non-coding downstream 294805 13106280 ~ 13106757 (+)
G69789 NA non-coding downstream 296120 13107595 ~ 13107832 (+)
G69796 stk17b non-coding downstream 318623 13130098 ~ 13133839 (+)
G69985 NA non-coding downstream 704214 13515689 ~ 13518237 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other upstream 159755 12627535 ~ 12629535 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other upstream 336925 12434988 ~ 12452365 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other upstream 633486 12046499 ~ 12155804 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other upstream 1299141 11465604 ~ 11490149 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other upstream 1758881 11021736 ~ 11030409 (+)
G69755 NA other downstream 173393 12984868 ~ 12985978 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other downstream 478218 13289693 ~ 13304591 (+)
ccnt2a ccnt2a,LOC107658298,LOC107725237,LOC107723659,LOC107684218,LOC107555058,LOC107555362 other downstream 864688 13676163 ~ 13684835 (+)
LOC122351767 NA other downstream 1775607 14587082 ~ 14589439 (+)
si:ch211-168k14.2 si:ch211-168k14.2,LOC107681321,LOC107748618,LOC108441415,LOC105905900,LOC108266656,LOC107600399 other downstream 2589652 15401127 ~ 15425361 (+)

Expression


Co-expression Network