LOC122351865 (LOC107664838,LOC107555340,LOC107555341,LOC107555339,LOC107723663)


Basic Information

Item Value
gene id LOC122351865
gene name LOC107664838,LOC107555340,LOC107555341,LOC107555339,LOC107723663
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14152092 ~ 14152848 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249232.1
ATGATGGGCAAGGTGATCTTCTACGAGGACAGGAACTTCCAGGGTCGCTCTTATGAGTGTATGGGTGACTGTGGAGACTTCTCCTCCTACATGAGTCGCTGTCACTCTTGTAGAGTTGAGAGCGGATGCTGGATGATGTACGATAATCCCAACTACATGGGAAACCAGTATTTCTTCAGAAGGGGAGACTATGCTGATTATATGTCTATGTTTGGAATGAACAACTGCATCAGATCCTGCCGTATGATTCCTATGCACAGGGGATCCTACAGAATGAGAATCTACGAGAGGGATAACTTCATGGGTCAGATGTACGAGATGATGGATGACTGTGACAGCATCATGGACCGTTACCGCATGTCTCACTGCCAGTCCTGTCATGTGATGGACGGCCACTGGCTCTTCTATGAGCAGCCCCACTACAGAGGCAGGATGTGGTACTTCAGGCCTGGAGAGTACAGGAACTTCAGCAATTTTGGAGGCATGAGATTCATGAGCATGAGGCGTATCATGGACTCCTGGTACTAG

Function

NR:

description
PREDICTED: gamma-crystallin M2 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249232.1 True 528 mRNA 0.48 3 14152092 14152848

Neighbor

gene id symbol gene type direction distance location
LOC122351864 LOC107664838,LOC107555340,LOC107568713,LOC107555341 coding upstream 3254 14148036 ~ 14148838 (+)
LOC122351866 LOC107664838,LOC107555340,LOC107555341,LOC107568713 coding upstream 9037 14142241 ~ 14143055 (+)
LOC122351860 LOC107664838,LOC107555340,LOC107555341,LOC107568713 coding upstream 14153 14137123 ~ 14137939 (+)
LOC122351239 LOC107724463,LOC107664838,LOC107555344,LOC107555340,LOC107555341 coding upstream 17971 14132827 ~ 14134121 (+)
LOC122351238 LOC107664838,LOC107555340,LOC107555341,LOC107555339,LOC107723663 coding upstream 22450 14128848 ~ 14129642 (+)
LOC122351492 LOC107597405,LOC107705173,LOC107724463 coding downstream 2876 14155724 ~ 14156504 (+)
LOC122351493 LOC107724463,LOC107555344,LOC107664838,LOC107555340 coding downstream 13898 14166746 ~ 14167567 (+)
LOC122351862 LOC107664838,LOC107555340,LOC107568713,LOC107555341 coding downstream 16832 14169680 ~ 14170576 (+)
LOC122352119 crygm2a,LOC107568720,LOC107724460,LOC107663175,LOC107705169,LOC107597400,LOC107724459,LOC107658274 coding downstream 20647 14173495 ~ 14174380 (+)
LOC122352118 LOC107568713,LOC107724462,LOC107663981,LOC107705172,LOC107664838 coding downstream 25525 14178373 ~ 14179175 (+)
G70064 NA non-coding upstream 212362 13931619 ~ 13939730 (+)
G70045 si:dkey-91i10.3,LOC107658292,LOC107725254,LOC107555015,LOC107683415,LOC107723676,LOC107555356 non-coding upstream 364971 13777632 ~ 13787121 (+)
G70043 NA non-coding upstream 382663 13769229 ~ 13769429 (+)
G70032 NA non-coding upstream 459605 13692214 ~ 13692487 (+)
LOC122351436 LOC107555330 non-coding upstream 463059 13686665 ~ 13689033 (+)
LOC122352011 NA non-coding downstream 153699 14306547 ~ 14329484 (+)
G70125 NA non-coding downstream 179452 14332300 ~ 14335751 (+)
G70181 NA non-coding downstream 426422 14579270 ~ 14580468 (+)
G70184 NA non-coding downstream 431383 14584231 ~ 14584488 (+)
G70185 NA non-coding downstream 431743 14584591 ~ 14585026 (+)
ccnt2a ccnt2a,LOC107658298,LOC107725237,LOC107723659,LOC107684218,LOC107555058,LOC107555362 other upstream 467257 13676163 ~ 13684835 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other upstream 847501 13289693 ~ 13304591 (+)
G69755 NA other upstream 1166114 12984868 ~ 12985978 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other upstream 1348684 12732298 ~ 12803408 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other upstream 1522557 12627535 ~ 12629535 (+)
LOC122351767 NA other downstream 434234 14587082 ~ 14589439 (+)
si:ch211-168k14.2 si:ch211-168k14.2,LOC107681321,LOC107748618,LOC108441415,LOC105905900,LOC108266656,LOC107600399 other downstream 1248279 15401127 ~ 15425361 (+)
LOC122351678 hspe1,mob4,LOC107690609,LOC107595852,LOC107569672,LOC107731766,LOC106586370,LOC105016277,LOC100701317,LOC103156730,LOC101472107,LOC102310674,LOC102783361,LOC108238849,LOC107690608,LOC106582314,LOC105899369 other downstream 1555353 15708201 ~ 15715901 (+)
plcl1 LOC107569711,LOC107731752,LOC107690606,LOC107719808,LOC107659890,LOC107595846 other downstream 1581722 15734570 ~ 15789702 (+)
rabl3 rabl3,LOC107569739,LOC107690631,LOC107659889,LOC107595844,LOC107736356 other downstream 1746579 15899427 ~ 15901720 (+)

Expression


Co-expression Network