ttll4 (LOC107738099,LOC107688755,LOC107752897,LOC107596548,LOC107593000,LOC107668375)


Basic Information

Item Value
gene id ttll4
gene name LOC107738099,LOC107688755,LOC107752897,LOC107596548,LOC107593000,LOC107668375
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 7893615 ~ 7907304 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249251.1
tatttgattggtTACGTGATTTATTGTGCTTTACTGTAAACGGCATATCAGCTCACAAGAGCATCATTTCTAGACTTTTAGCACCTGTCACAAAAGCTAAATTATAATGAAGCAGATACGAAGTCTTTGTCGTTGACTCTCAGAAATGTTTTCCTCTGAGTACAGCACTTCAACAATGGCCTAGTTAGCGGGAGGGAATTGTCTTTCCATGGTAATGTAACCACAACTTCAGTTCTGCACATGTAACCCTATCCAGTGTCATGTCAGTCTAGGGCTCGTGGAAGAAAAGATCTGATCGAGTCTTCTCTCGCCTGAGAATCTTACACGCAGTGTGATTTGATGAGGGTCGCTGCAATCCTCGATTCAGACTAAAAGtCAGCACCGCAGGCAGCACGAGGGAAAACAGCACGAGGCGGGTTTCTCGAGCGCGACACTCTCTCTGAGGCAGCCCACTAAAACTACCCTGTCACCCGGAGCCGCGGTAGCACCCTCTGTCCTTCGGTTCCCCACTTATGTGTTTGCCTGAGCCCATGCCAGGGGGGTGTGAGATGGCAATTAATGGCCTCCGGTGGAGCTGAAGACGTAAGGAATGGGGCATCTCGGCCAGCCCTCGTCATCCAAGCCAAGTCCGCAGTAGTGCATTCGCCCAATGCACGAGGCACTTTCAATGCTGAAAGAAAGAGACTGCAGGGAGCCGCGGGTGATTCGGTGCCTCAGCCGAATGTGAGAGTGCTGTGTGATCAGCCCTTCTGTGTCTCAGGGATCCCCACACAACGTGCCTATCCACACGTGCCTACAGTAAGAGTCAACCGCGTACAGAGCACAAGTGCGACTTCTTTGAACTGTGCTAGTAACGGTTTGAGGACCCACAGTGTTTTATCCAAGAGTTTGCCACATATCAACGCCGCTCCCGCTGCATGCCATAGCCACCGTCAATCCCACTGGAGCCTTGATTCATTTCGTTTCAAGTCGGGGCTGTTAGGAAAAAGGGCCTTTTCGCCTCAGCTGTCCGTTTGTCCTGCCTGTCCCTCCCCACCCAAGTCGTCTTCTCAAAGGCTTGTAATTGAGAAAATCATGCCTACTAATCAGTCTTTGCCTTGGACGAGCAACAAGCTCAGGGATAACAGCAATGGAGTTGTGCGGCCCCCAAATGCCAAAATGCCCACGTACTCCAAACAAGAGACCGTTGAGCTGCACGGTCCCGCCAATATCGTATCCGGCTGCAATGGGACACATTCGCGAGGCCTCAGAAGCGACGCAACGAAACCTCCCCAACCGAGCGTGCCTTTGAAAGACATATGCACGGACGCGCTTTTGAACTACAGCAAGGCAGCCAAGGATTTAAAGGCGTTTGAGAAGATCGTAGCAGAAGACGCTAGGGCCATCGAGCTGGAGCGCTGTGCGGGACGCGGCGTCGGTGAAGCTCCTCAGAGAGTGACCAAAATCAGCTCTGAGGCAGAGTTCGCTGCCGCCGTCGTGCATAAACTCACCAAAATCAACGCACACGCAAGACACCGGACGCTCAATGGTGTGAGCAACAACGTGAAACATCTCGCAGGTAGCGCCGTACCCATCTGCCTTATTCGTGAAGATGAGGAGTCTTGTTTTGCACCTATGGAAACCAACAGTGCCCTCAGGTCTGATGTAACGGATGACAAGTGCCCCTCTGCTGTCGTGTGTGATGTTAAGACGCAGGGAGCTGGTTGTGCCATTCCAGAGGCGGCTGGCCGAGATGCGGTCTCTCCTCAGTCGCCGTCTGTTTACGCCGTGACAAATCAGATATCTGCCATTCAACTCACTAAAGAGGAATGCTGTCAAGCCTCTCAGGTGGACACAAGCCCCGCGATGGAGGAGGAGGATAGTCATGAGATTCAGAGACAGGGACTGCTTCTAGATGGTGATGAGGAGGAGCTTCCAGATAAGCTGGAGAATGACTTCAGTGATGATGTCGACTCAGATGATTGTGATGTCTCCTCTACAACATCCATGACAGCCTTGTCCAaTGTCGAGGAACCCGTTAGTCCTGATGTGGAGGGGGATCTAGTGGAGAAACCTGCACTTGTTCCCAGTCTCTTCCCCCACATGCCCTCCACGCTGTACTTCAGCACTGCCAGTGAAAGAGTGGAGCTGTTGCCTGCTGAACAGAGGAAGCTGCTCAAATGGAAGATAACTACAGTCACCCCCAATGTTGTGAAAAACACCATCTCCAGATCACACTTCAAAGCCACCAAAAagAGTCATGATTGGCTTGGCTGTTGGGGTCATCATATGAAGTCACCAGGGTTCAAGACCATTAGAGAGTTTCAGAAGCTGAACCACTTTCCAGGCTCCTTTCAGATCGGCCGGAAGGACCGACTTTGGAGGAACCTGTCCAAGATGCAGGCACGCTTTGGCAAAAGAGAGTTTGGCTTCTTCCCACGCTCCTTCATTCTCCCACAGGATATAAAGCTGCTAAGGAAGGCCTGGGAGGATGGAGGCAGCAAGCAGAAATGGATTGTCAAACCGCCCGCATCTGCTCGTGGAATTGGCATTCAGGTCATTCACAAGTGGAGCCAAATGCCACGGAAGAGACCACTCCTTGTGCAGAAGTATCTTCACAAGCCCTACCTCATCAGTGGGAATAAGTTTGATCTACGCATCTATGTGTATGTGACCTCTTATGACCCACTCTGTGTTTACATCTTTAATGATGGACTGGTCCGTTTTGCAAGCTGCAAatacTCTCCTTCTATGAAGACCCTCAACAACAAGTTTATGCACCTTACAAACTACAGTGTAAATAAGAAGAACACGGAGTATCAGAGCAACAGCGACGATAAGGCTTGTCAGGGTCATAAATGGGCCTTGAAGGCGCTGTGGCAGTACTTAGGCTCTCAAGGTATCAATACCACTCTCATTTGGGAGAAGATCAAAGATATGGTCATCAAAACCATCATTGCGTCTGACCCGTACGTGAACTCACTGGTGAAGATGCATGTACGTTCCTCCTACAGCTGTCATGAGCTGTTTGGCTTTGACATCATGTTGGATGAGAATCTGAAGCCATGGGTGCTGGAGGTGAACATCTCGCCCAGcCTACATTCTAACACACCACTGGACGTGAGCATCAAAGGTCAGATGATTCGAGACCTGCTGAATCTTGCTGGCTTTGTGTTGCCTTTGAGAGAAGACGTTGCATCATCCAGTTCCAGTGCCAGCAGCTCCACCAATAGtttatGTGGAGCAGTGCGAGAGAAATGGCGATCAGACATTTCTACAGATGAGAAAGTAAAGAGAGCTTTTTATCTCAGCCAGCGCTTTGGAGATCAGGATTTTTGTGCAACAATCCTGGACGTGCTGACACCTGATGATGTTCGTGTGCTGGCAGAGATTGAGGACGAGTTGAGTCGTAAAGGAGATTTTGAGCGAGTTTTTCCCTCTCATGCTTCCTCCCGGTACCTTCGTTTCTTTGAGCAACCACGCTACCTCAACATCCTCCTCAACCAATGGGAACAGAAATACTGGCTCAACAGGAGCAAAGGTATCAATCTGCTGAGGGATTTATGTGAGAAGAGGGTGCACCTGGGCAACCTGGCAGATTCTGTTCATCACtggTCTTCCAAGTCGTATCATGGACACCGATCTCAGATGACTAGATCTGGTGTTCTGGTCAGTCAGAGGTCTGATGCTGAAGATGAGGATTCGTCTGACCGTGAAGttcagtcagtcactatgaGTCTTCCAGATATGAGTTTGCTGAGCACCATCAGCCTGAGCCCCAGTCCCACCTCCAGCTCCAGTCTGGCCAGCGACAGCCTGCCTTCTCACGATGACCTTTGAGACCCATCGCACAAACCCCTTGACATTCAGAGCTTCCAAACTGTGTGTATACGTGTCACACGCTCCTAGCAGAGCTCCTAGAGTTGTGCTTTCCTGCTTTTGGAGGGAGATGAGACTGAAAAGCAGACTAAAAGAAATAACTGGCCAAATGGATAACAATCGTATTTTGAATGAGTGTTTTGTTGCTGGACCACACATACGGGTGTAACTACACGGTGCTTGTGGGTGGCAGGAGGAATAATACCTTCCTGTTTGGAGTTTTGATTGTGTATCCGTATACTATAGCTACTTGGGCATTGTTTACATCACAGGTCTGTGTATAGTACAGGCATCTGTTGAGCTGATTATTTTAAACGTGTGGGATGAAATGTGAAGTTTGGAAAAGAGAtgctattgtaaaaataaaaatcactgtcATGTCTTTTAATGACATTTGCATGGCCTTCTCAAGGTAGACAACATGCTCAGGTTaaggtttttaaattaaaattgctgTTTGAAATATGA
>XM_043249252.1
tatttgattggtTACGTGATTTATTGTGCTTTACTGTAAACGGCATATCAGCTCACAAGAGCATCATTTCTAGACTTTTAGCACCTGTCACAAAAGCTAAATTATAATGAAGCAGATACGAAGTCTTTGTCGTTGACTCTCAGAAATGTTTTCCTCTGAGTACAGCACTTCAACAATGGCCTAGTTAGCGGGAGGGAATTGTCTTTCCATGGTAATGTAACCACAACTTCAGTTCTGCACATGTAACCCTATCCAGTGTCATGTCAGTCTAGGGCTCGTGGAAGAAAAGATCTGATCGAGTCTTCTCTCGCCTGAGAATCTTACACGCAGTGTGATTTGATGAGGGTCGCTGCAATCCTCGATTCAGACTAAAAGCGGTAGCACCCTCTGTCCTTCGGTTCCCCACTTATGTGTTTGCCTGAGCCCATGCCAGGGGGGTGTGAGATGGCAATTAATGGCCTCCGGTGGAGCTGAAGACGTAAGGAATGGGGCATCTCGGCCAGCCCTCGTCATCCAAGCCAAGTCCGCAGTAGTGCATTCGCCCAATGCACGAGGCACTTTCAATGCTGAAAGAAAGAGACTGCAGGGAGCCGCGGGTGATTCGGTGCCTCAGCCGAATGTGAGAGTGCTGTGTGATCAGCCCTTCTGTGTCTCAGGGATCCCCACACAACGTGCCTATCCACACGTGCCTACAGTAAGAGTCAACCGCGTACAGAGCACAAGTGCGACTTCTTTGAACTGTGCTAGTAACGGTTTGAGGACCCACAGTGTTTTATCCAAGAGTTTGCCACATATCAACGCCGCTCCCGCTGCATGCCATAGCCACCGTCAATCCCACTGGAGCCTTGATTCATTTCGTTTCAAGTCGGGGCTGTTAGGAAAAAGGGCCTTTTCGCCTCAGCTGTCCGTTTGTCCTGCCTGTCCCTCCCCACCCAAGTCGTCTTCTCAAAGGCTTGTAATTGAGAAAATCATGCCTACTAATCAGTCTTTGCCTTGGACGAGCAACAAGCTCAGGGATAACAGCAATGGAGTTGTGCGGCCCCCAAATGCCAAAATGCCCACGTACTCCAAACAAGAGACCGTTGAGCTGCACGGTCCCGCCAATATCGTATCCGGCTGCAATGGGACACATTCGCGAGGCCTCAGAAGCGACGCAACGAAACCTCCCCAACCGAGCGTGCCTTTGAAAGACATATGCACGGACGCGCTTTTGAACTACAGCAAGGCAGCCAAGGATTTAAAGGCGTTTGAGAAGATCGTAGCAGAAGACGCTAGGGCCATCGAGCTGGAGCGCTGTGCGGGACGCGGCGTCGGTGAAGCTCCTCAGAGAGTGACCAAAATCAGCTCTGAGGCAGAGTTCGCTGCCGCCGTCGTGCATAAACTCACCAAAATCAACGCACACGCAAGACACCGGACGCTCAATGGTGTGAGCAACAACGTGAAACATCTCGCAGGTAGCGCCGTACCCATCTGCCTTATTCGTGAAGATGAGGAGTCTTGTTTTGCACCTATGGAAACCAACAGTGCCCTCAGGTCTGATGTAACGGATGACAAGTGCCCCTCTGCTGTCGTGTGTGATGTTAAGACGCAGGGAGCTGGTTGTGCCATTCCAGAGGCGGCTGGCCGAGATGCGGTCTCTCCTCAGTCGCCGTCTGTTTACGCCGTGACAAATCAGATATCTGCCATTCAACTCACTAAAGAGGAATGCTGTCAAGCCTCTCAGGTGGACACAAGCCCCGCGATGGAGGAGGAGGATAGTCATGAGATTCAGAGACAGGGACTGCTTCTAGATGGTGATGAGGAGGAGCTTCCAGATAAGCTGGAGAATGACTTCAGTGATGATGTCGACTCAGATGATTGTGATGTCTCCTCTACAACATCCATGACAGCCTTGTCCAaTGTCGAGGAACCCGTTAGTCCTGATGTGGAGGGGGATCTAGTGGAGAAACCTGCACTTGTTCCCAGTCTCTTCCCCCACATGCCCTCCACGCTGTACTTCAGCACTGCCAGTGAAAGAGTGGAGCTGTTGCCTGCTGAACAGAGGAAGCTGCTCAAATGGAAGATAACTACAGTCACCCCCAATGTTGTGAAAAACACCATCTCCAGATCACACTTCAAAGCCACCAAAAagAGTCATGATTGGCTTGGCTGTTGGGGTCATCATATGAAGTCACCAGGGTTCAAGACCATTAGAGAGTTTCAGAAGCTGAACCACTTTCCAGGCTCCTTTCAGATCGGCCGGAAGGACCGACTTTGGAGGAACCTGTCCAAGATGCAGGCACGCTTTGGCAAAAGAGAGTTTGGCTTCTTCCCACGCTCCTTCATTCTCCCACAGGATATAAAGCTGCTAAGGAAGGCCTGGGAGGATGGAGGCAGCAAGCAGAAATGGATTGTCAAACCGCCCGCATCTGCTCGTGGAATTGGCATTCAGGTCATTCACAAGTGGAGCCAAATGCCACGGAAGAGACCACTCCTTGTGCAGAAGTATCTTCACAAGCCCTACCTCATCAGTGGGAATAAGTTTGATCTACGCATCTATGTGTATGTGACCTCTTATGACCCACTCTGTGTTTACATCTTTAATGATGGACTGGTCCGTTTTGCAAGCTGCAAatacTCTCCTTCTATGAAGACCCTCAACAACAAGTTTATGCACCTTACAAACTACAGTGTAAATAAGAAGAACACGGAGTATCAGAGCAACAGCGACGATAAGGCTTGTCAGGGTCATAAATGGGCCTTGAAGGCGCTGTGGCAGTACTTAGGCTCTCAAGGTATCAATACCACTCTCATTTGGGAGAAGATCAAAGATATGGTCATCAAAACCATCATTGCGTCTGACCCGTACGTGAACTCACTGGTGAAGATGCATGTACGTTCCTCCTACAGCTGTCATGAGCTGTTTGGCTTTGACATCATGTTGGATGAGAATCTGAAGCCATGGGTGCTGGAGGTGAACATCTCGCCCAGcCTACATTCTAACACACCACTGGACGTGAGCATCAAAGGTCAGATGATTCGAGACCTGCTGAATCTTGCTGGCTTTGTGTTGCCTTTGAGAGAAGACGTTGCATCATCCAGTTCCAGTGCCAGCAGCTCCACCAATAGtttatGTGGAGCAGTGCGAGAGAAATGGCGATCAGACATTTCTACAGATGAGAAAGTAAAGAGAGCTTTTTATCTCAGCCAGCGCTTTGGAGATCAGGATTTTTGTGCAACAATCCTGGACGTGCTGACACCTGATGATGTTCGTGTGCTGGCAGAGATTGAGGACGAGTTGAGTCGTAAAGGAGATTTTGAGCGAGTTTTTCCCTCTCATGCTTCCTCCCGGTACCTTCGTTTCTTTGAGCAACCACGCTACCTCAACATCCTCCTCAACCAATGGGAACAGAAATACTGGCTCAACAGGAGCAAAGGTATCAATCTGCTGAGGGATTTATGTGAGAAGAGGGTGCACCTGGGCAACCTGGCAGATTCTGTTCATCACtggTCTTCCAAGTCGTATCATGGACACCGATCTCAGATGACTAGATCTGGTGTTCTGGTCAGTCAGAGGTCTGATGCTGAAGATGAGGATTCGTCTGACCGTGAAGttcagtcagtcactatgaGTCTTCCAGATATGAGTTTGCTGAGCACCATCAGCCTGAGCCCCAGTCCCACCTCCAGCTCCAGTCTGGCCAGCGACAGCCTGCCTTCTCACGATGACCTTTGAGACCCATCGCACAAACCCCTTGACATTCAGAGCTTCCAAACTGTGTGTATACGTGTCACACGCTCCTAGCAGAGCTCCTAGAGTTGTGCTTTCCTGCTTTTGGAGGGAGATGAGACTGAAAAGCAGACTAAAAGAAATAACTGGCCAAATGGATAACAATCGTATTTTGAATGAGTGTTTTGTTGCTGGACCACACATACGGGTGTAACTACACGGTGCTTGTGGGTGGCAGGAGGAATAATACCTTCCTGTTTGGAGTTTTGATTGTGTATCCGTATACTATAGCTACTTGGGCATTGTTTACATCACAGGTCTGTGTATAGTACAGGCATCTGTTGAGCTGATTATTTTAAACGTGTGGGATGAAATGTGAAGTTTGGAAAAGAGAtgctattgtaaaaataaaaatcactgtcATGTCTTTTAATGACATTTGCATGGCCTTCTCAAGGTAGACAACATGCTCAGGTTaaggtttttaaattaaaattgctgTTTGAAATATGA

Function

NR:

description
PREDICTED: tubulin polyglutamylase TTLL4, partial

GO:

id name namespace
GO:0018095 protein polyglutamylation biological_process

KEGG:

id description
K16601 TTLL4; tubulin polyglutamylase TTLL4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249251.1 True 4326 mRNA 0.49 20 7893615 7907304
XM_043249252.1 False 4222 mRNA 0.49 19 7893615 7907304

Neighbor

gene id symbol gene type direction distance location
abcb6b abcb6b,abcb6a,abcb6,LOC107688753,LOC107596549,LOC107716755 coding upstream 12581 7855221 ~ 7881034 (+)
nrp2b nrp2b,LOC107688766,LOC107752901,LOC107668386,LOC107716756,LOC107596550 coding upstream 71721 7756774 ~ 7821894 (+)
pard3bb pard3bb,LOC107688750,LOC107716778,LOC107721601,LOC107668384,LOC107593023 coding upstream 164824 7473998 ~ 7728791 (+)
fn1a fn1a,LOC107716781,LOC107688749,LOC107668382,LOC107721590 coding upstream 463131 7404352 ~ 7430484 (+)
LOC122351251 LOC107716765,LOC107721581,LOC107551069,LOC107668359 coding upstream 510413 7380818 ~ 7383202 (+)
prkag3b prkag3b,LOC107738101,LOC107596559,LOC107752899,LOC107668376 coding downstream 783 7908087 ~ 7920562 (+)
fer1l6 fer1l6,LOC107752896,LOC107596537,LOC107738098 coding downstream 14374 7921678 ~ 7938502 (+)
raph1a raph1,raph1a,LOC107752894,LOC107592998,LOC107688759,LOC107668371 coding downstream 55103 7962407 ~ 8017887 (+)
fzd7a fzd7,fzd7a,LOC107751502,LOC107752890,LOC107668396 coding downstream 262862 8170166 ~ 8172963 (+)
LOC122351256 LOC107668397,LOC107593014,LOC107752910 coding downstream 269531 8176835 ~ 8202936 (+)
G68446 NA non-coding upstream 39337 7853481 ~ 7854278 (+)
G68435 NA non-coding upstream 557256 7335491 ~ 7336359 (+)
G68397 desma,LOC107688742,LOC107602901,LOC107716787 non-coding upstream 592120 7280767 ~ 7301495 (+)
G68424 NA non-coding upstream 629902 7262541 ~ 7263713 (+)
G68401 NA non-coding upstream 634221 7256680 ~ 7259394 (+)
G68668 NA non-coding downstream 296549 8203853 ~ 8205963 (+)
G68678 NA non-coding downstream 315283 8222587 ~ 8222817 (+)
LOC122351403 NA non-coding downstream 693420 8600724 ~ 8614984 (+)
G68808 NA non-coding downstream 918908 8826212 ~ 8827046 (+)
LOC122352063 NA non-coding downstream 952169 8859473 ~ 8860379 (+)
LOC122351907 LOC107670338,LOC107721263 other upstream 1920492 5962884 ~ 5973123 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other upstream 2007862 5883927 ~ 5885753 (+)
trnam-cau_112 NA other upstream 2436086 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 2436352 5457191 ~ 5457263 (+)
trnam-cau_111 NA other upstream 2436772 5456772 ~ 5456843 (+)
si:ch211-167j6.3 NA other downstream 433991 8341295 ~ 8342751 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 523807 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 553440 8460744 ~ 8506143 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other downstream 956083 8863387 ~ 8866305 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other downstream 959793 8867097 ~ 8871633 (+)

Expression


Co-expression Network