LOC122351880 (ugt1a4,LOC107663839,LOC107556441)


Basic Information

Item Value
gene id LOC122351880
gene name ugt1a4,LOC107663839,LOC107556441
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 9633153 ~ 9636711 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249264.1
ACTCATAGTTATGCACCACTGCTGATTTTGCCTGTGCTGTTGCTTATACTAACTCTCTAATGTGAAGAGAACCCTctttaataatatgaattaacTTACAAAAACCTCTATATGCTGCTGGAAAAAAACGTTTTGGAGAAATGTTAGATTATTTGTGAAAATTGCACCAGTAAGGGATCAATAGAATAGAATTAATAGAAGATGTTGGGAGgagggagaacctgtttgaacAGAAAACAGTAGAAACAATAGTTTGACTATTTCTGGAATTTTATCACTTTACAAAACTCTACAAACCAGTTTTACGGTTTTTGTGCATGTGACAGTGTGCCCCCTTTTCagcttaataaaatatgtagCACATATAACACATTTCCATTTTCTCACTGTAGATGTAACTGTAaccattatttttgtcataccatccattattttgtttatatttccaAATCATTAATTAATGTCTTAGCTAATTCCATGAGCATGATGCATTTGCCTTGCAATTCCTATAGAGGGTAGTCTAAGTGCTAGGAACTGTGAGCCAAGCATGGCTTTGACATTTTTGCTGTATAGCTTTGCCAGTAACCATCACAATttgcagtttttacattttgctttctttttcttttgttttttctatgaCATTAAAAATTCATATCCATTTATTCCTGCAATTTTTTGCATGACAAAATCTTTTTTCAACTTTCACCCCGATTGGTTGCCGCACTGCCTTAGATAGAAGAAGTCCCACCCACCTGCAGTGGTGTCCACCTTCATTGGAGATAAAGTCATTGTGAGACATTGGAGTACTTTACATTGCACATTGCCAGATTGATTTTGCCGACCTCTGCTGCAGCTTGCAAAGGCAAaagtgagagatttttttttttattatatataccaGTGATAAAATGCCTGGCCTGTGGTTGCTTCTGGGTCTCTTCTTGGGTTCAGCTGAAGCTGGGAAACTGTTGGTTATACCATCAGATGGCAGTCACTGGTTGGGGATGAAGCCTATTGTGGAGGAGCTGGGGAGGAAAGGAAACCAGGTGGTGGTCGTCATCCCAGAGGCGAGTCTGAGTATGGGTCCTTCAGAGCATACCACCACTCTGACGTATCCAGTCAACTACACCAAGGCTGAACTACATACACTATTAGAAGGCAATTTAACTGAGATTCTGAGTACGGACCTTTCTTCTGACCTGTCCAAGTTCCTGGTTTTCTTCTACCAAATGCACCTTCTTCGAAGCTTCATAATAAGGAATGCAGAGGGTCTGTTCTTTAAGGAAGACTTGATGAAGAAGCTCCAAGACTACAGCTTTGATGCGATTCTCACCGACCCGTTTGAGCCTGTTGGGGTTATTGTTAGTGAATATCTCTCCATTCCAgctatttatatgcaaataaacctTCCCTGTGGTGTCGACGCTCTTGCCAGCCAATGTCCAAGTCCACCCTCTTATGTTCCACAGCGTAATACCCACTTTACAGACAAGATGAATTTGTGGCAGAGGTGTGTCAACCTGGTAAGGACTCTGCTGCAGCCCATGGCttgtaaatacatgcatactgAAGCAGATGAGATCGCCTCACGTGtacttcagaaaaaaactaCGATTATGGAGATCATGAGCCATGCAGCTCTCTGGTTTATGCGCTTTGACTTTGCTTTTGAATTTCCACGTCCAGTGATGCCTAACATGGTGATGATTGGAGGTATGGCAACCAAGAAGCCCAAACTATTGACACAAGTAAGCTCTAATTTCCATGCAAATCACACACCGCAAGGATCAGTGATATAGCTCTTTTTTTCCATATGTGGTTTTTCAGTCCTTGTCTGTCATTGTCATGGACTGTAAAAAATAGCCAGCAAATGCAAAAGCTCAAACTTCAGACCAGCACCAAAACCCATACcatttagtgttttgtttaaattaatagtgTCTAATGGGGTGAGGCAGAAACTAATGTGGTCTTTTCAGAAAGAGCAAAATCATTTTAGAAATACACATTCTCTTGAAACATCTCTAcctacaataatattaaaaagtctaTTTCTGGACACTGAGGCAAAGTAATATGCTGTCAGTTAACTATTTCCTGGATTTTTCATAACAACATGCTAATTTGTACAGCGATAAAATAGGctataaatagcatatattaTCAACCATAAATGAACGTCATTGCAAAAGGCAAAGTTATTCACACTCAACGGTGGTTTAATGTGAGTTTTGAGTAAAAGTGTACTATTAATCTCATAAATTTTATACATTAGCATGATGCTAATGTTAGCTTTAATGCTGCAGCTCAGTTGCAGTTCTTCTTCATAAAGCATTTTGTCATAATATTGCAAATGTAATGTGAGCACATGTTATCATGATATCGGATTAGAGGGTCTAGTTGGAGTgggacattttaaattacacacTTTTTATAGCCTTACAGCCCAGTGTTGAGGAAGATATGTTAGTGCGTTATAACCACAGTTCTTGCGCTTATtccaaaattttaaatgcattaaaatcttttttaaaatgtattgtttcttCTCAAACTAGATAAAAAAACCTACAGATAGATTAAGCAAACAAACtgacaattatatttaatatagtttgcatttatattggTGACAATATATTACACAAGTATAGATTTGTTTTACTCTTAGTGATTTATATGTAAGTTTTAATATGTAACTATACATACAAAAATCACACACTCTCTGTGGGCTTATTACTTGTTAAGAttgaacatatttaattaagttaagcttaaaatgaaatagctatagttattttaaatggtagtatGGCATTTTGAATTCAGTGCTTTAGGCTTCACTGTTTATTATGCCACTATGGTCagcaggctggttttagaggggtttAGCCAGGCTGGGAgtccagctaaaaccagccacttccagcttaaaccagctaacaCCTGCCAACCAGCCTAGGttggttttagctgtttttttcccagcaGGGATGTGGTTTGGATATTTTCATAACAACATGCTAATTGGTACAGTGATACAAAAAGGCTATACATagcatattttaacaacaacaaattccATGTCATTGCAAAAGGAAAGGTTATTAACACTCAATGGTGGTTTAATGTGAGTTTTGAGTAAAAGTGTACTATTAATTTCATAATGTTTGTACATTAGCATGGTGCTAATGTTAGCTTTAATGCTACAGATCAGTTGCAGTTCTTCTTCATAAAGCATTTTGTCATAATACTGCATGcgagtttccaaaaaaaaccccattttGTTCTATTTATTAAGAAATAGTTAGGTAAAAGTTTACTGGGATTGTGGCTATGTGgcttgataaatgttttattgccagTATAAAGTTTGATAATAGCTGGATAAAAACCAAGAATAATGATAAaggaataataatgataatgtctCATACCTGGTTGAGTGGTAAAAAGATATGTTTCCCTAAACTAAtcatgtatttctttatttgaacaaatttgCATGGAAATCCTAGTATTTAAAATTTGCAATTGATCATGATTAATCAGAGTC

Function

symbol description
ugt1a4 Enables glucuronosyltransferase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in gill; intestine; liver; spleen; and testis.

NR:

description
PREDICTED: UDP-glucuronosyltransferase 1-5-like isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016758 transferase activity, transferring hexosyl groups molecular_function
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249264.1 True 3559 mRNA 0.36 1 9633153 9636711

Neighbor

gene id symbol gene type direction distance location
spopla spopla,LOC107751611,LOC107556446,LOC107720326,LOC107558043,LOC107658226,LOC107663914 coding upstream 22407 9601986 ~ 9610746 (+)
hnmt hnmt,LOC107751616,LOC107720324,LOC107663827,LOC107658225,LOC107577691,LOC107558040 coding upstream 58399 9570400 ~ 9574754 (+)
chpfa chpfa,LOC107749870,LOC107663851,LOC107571864,LOC107672254,LOC107743933 coding upstream 656154 8966861 ~ 8976999 (+)
umps umps coding upstream 801251 8827690 ~ 8831902 (+)
itgav itgav,LOC107663834,LOC107672211,LOC107752904 coding upstream 808762 8801297 ~ 8824391 (+)
LOC122351879 LOC107558046,LOC107658227,LOC107558044,LOC107720327 coding downstream 680 9637391 ~ 9639325 (+)
LOC122351881 ugt1a2,LOC107663839,LOC107732349 coding downstream 2666 9639377 ~ 9641034 (+)
LOC122351878 LOC107558046,LOC107658227,LOC107558044,LOC107720327 coding downstream 5986 9642697 ~ 9650909 (+)
prmt2 prmt2 coding downstream 16945 9653656 ~ 9658375 (+)
LOC122352127 il1rapl1,LOC107756873,LOC107677935,LOC107698784 coding downstream 201604 9838315 ~ 9884933 (+)
G68908 NA non-coding upstream 57499 9575421 ~ 9575654 (+)
G68901 NA non-coding upstream 220418 9255332 ~ 9412735 (+)
G68900 NA non-coding upstream 391766 9240938 ~ 9241387 (+)
G68897 NA non-coding upstream 438850 9180904 ~ 9194303 (+)
G68896 NA non-coding upstream 448585 9180751 ~ 9184568 (+)
G69003 NA non-coding downstream 253940 9890651 ~ 9891580 (+)
G69028 NA non-coding downstream 418785 10055496 ~ 10056501 (+)
G69031 NA non-coding downstream 424347 10061058 ~ 10061611 (+)
G69032 NA non-coding downstream 424974 10061685 ~ 10061887 (+)
G69033 cx45.6,LOC107663873,LOC107748213,LOC107572527,LOC107655501,LOC107720145,LOC107600426 non-coding downstream 425497 10062208 ~ 10062436 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 66156 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 472332 9156045 ~ 9160821 (+)
si:ch1073-416j23.1 si:ch1073-416j23.1,LOC107749868,LOC107663920,LOC107556448 other upstream 483060 9142592 ~ 9150093 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other upstream 761520 8867097 ~ 8871633 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other upstream 766848 8863387 ~ 8866305 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other downstream 455639 10092350 ~ 10113356 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other downstream 530625 10167336 ~ 10174783 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other downstream 692020 10328731 ~ 10395230 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other downstream 1385025 11021736 ~ 11030409 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 1828893 11465604 ~ 11490149 (+)

Expression


Co-expression Network