tex30 (tex30,LOC107663828,LOC107567637)


Basic Information

Item Value
gene id tex30
gene name tex30,LOC107663828,LOC107567637
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 11379870 ~ 11381952 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249308.1
GCTTCACGTGACCTGTCCACGTGGGAGAAACCCGGGCGTTTGAGTTCTTCCACCAAGCAACCATCAGTTCATAAATGGAATTTTCTGAGGAGAACGTGAGCATCCCGTTCGAGCAGAAGGAGCTGGACGGTGTGGTGACGGTGCCAGCGGACGTCCGCGCGCGACGCTGCACAGCTGTGGTGTTGACGCACGGCGCGGGGGGGGACATGCGCGCCAAACAGCTGGAGAGCGTCGCGCGCGCCCTCGCCCGTTCAGGCGCTCTGTGTCTGAGGTTCACCTGCAGGGCGCTGAACTTTACCTACAGGATCAGAGCTTACAGCGCCGTCGTAGAGTATTTAAAGACCCATGAGAGATATGCACCAGACAGTCTTTTCTTGGGAGGACGCTCTATGGGTGCTCGTACCGCTGTCGCTGTGTGTAAACGTATGTGTGACGTACAGAAGGATGCAGTCCAAGGGGTTTTGTGTTTGTCCTTCCCGCTGAACGTACCAGGAAAACCACAATCATTTGCTGAGCGGAGTCGTGACCTCCATGCACTGTCCCAGACCTCTGTGCTCTTTGTTTCTGGCACTGCAGACAACATGTGTCAACAGAATCTCCTACAAATTAGTATGCATGCCATGAAAAGCCCTTCTGCTGTTCACTGGGTCAAGGATGCAGACCATGGACTCAAAGTACGCGGCAGAACAGAAGAATCAGTAATGGAAGAAGTCAATTCAAAGATTATTGCATGGGTAGAACACCAAAAGTGACATGCATTtctagaaataaataaaggtggTTATTACTGTCTGGATGAAAGAAGAGGGTGAGCTCTGTACATAGTTACCGTATGTTAACTGTGTTACAGATTATGTAAGAACAATACAGATCATAATTATAGTCagcattattatcattaaaattgtgtttgaaCTGAGTACTATTTGGGATATTTTTACTAAACTATAAAAATCATATGTGTTGTTATTCTTATTGAGAGGACATTTGCttgcaaactgtattttcttgtaagctacagctataaaaaataaacactccTGGTAAAtaa

Function

symbol description
tex30 Predicted to enable hydrolase activity. Orthologous to human TEX30 (testis expressed 30).

NR:

description
testis-expressed protein 30

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249308.1 True 1051 mRNA 0.47 5 11379870 11381952

Neighbor

gene id symbol gene type direction distance location
poglut2 kdelc1,LOC107567637,LOC107733631,LOC107675345 coding upstream 448 11372926 ~ 11379422 (+)
stxbp5l stxbp5l,LOC107738516,LOC107663865,LOC107675353 coding upstream 7299 11263726 ~ 11372571 (+)
gtf2e1 gtf2e1,LOC107733656,LOC107738514 coding upstream 135440 11232007 ~ 11244430 (+)
crygs2 crygs2,LOC107663869,LOC107551958,LOC107733648,LOC107598173,LOC107698534 coding upstream 154037 11224548 ~ 11225833 (+)
tbccd1 tbccd1,LOC107551957,LOC107663868,LOC107733647,LOC107738513,LOC107698532,LOC107598171 coding upstream 157699 11217132 ~ 11222171 (+)
nepro si:dkey-22a1.3,LOC107733637 coding downstream 440 11382392 ~ 11385994 (+)
arhgap15 arhgap15,LOC107673132,LOC107709415,LOC107555858,LOC107563181,LOC107711394,LOC107675340 coding downstream 664522 12046474 ~ 12086508 (+)
LOC122351360 arhgap15,LOC107673132,LOC107709415,LOC107555858,LOC107563181,LOC107711394,LOC107675340 coding downstream 740279 12122231 ~ 12155973 (+)
acvr2aa LOC107709421,LOC107673126,LOC107675352,LOC107601072 coding downstream 1010334 12392286 ~ 12429356 (+)
med4 med4,LOC107724027,LOC107673119,LOC107601074,LOC107709409,LOC107675337 coding downstream 1071174 12453126 ~ 12456128 (+)
G69459 NA non-coding upstream 134392 11245151 ~ 11245478 (+)
G69417 armc8,LOC107733643,LOC107663904,LOC107551954 non-coding upstream 178705 11200651 ~ 11201165 (+)
G69403 NA non-coding upstream 289436 11063601 ~ 11090434 (+)
G69358 NA non-coding upstream 438346 10941308 ~ 10941524 (+)
G69355 NA non-coding upstream 456393 10923149 ~ 10923477 (+)
G69483 NA non-coding downstream 38253 11420205 ~ 11423317 (+)
G69518 NA non-coding downstream 597829 11979781 ~ 12009922 (+)
G69539 NA non-coding downstream 817982 12199934 ~ 12200597 (+)
G69578 NA non-coding downstream 940299 12322251 ~ 12322532 (+)
G69625 NA non-coding downstream 1075312 12457264 ~ 12457498 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other upstream 349461 11021736 ~ 11030409 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other upstream 984640 10328731 ~ 10395230 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other upstream 1205087 10167336 ~ 10174783 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other upstream 1266514 10092350 ~ 10113356 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 1812873 9443125 ~ 9566997 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 83652 11465604 ~ 11490149 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other downstream 664547 12046499 ~ 12155804 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other downstream 1053036 12434988 ~ 12452365 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other downstream 1245583 12627535 ~ 12629535 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other downstream 1350346 12732298 ~ 12803408 (+)

Expression


Co-expression Network