igsf3l (LOC107730347,LOC107670329,LOC107721263,LOC107549899)


Basic Information

Item Value
gene id igsf3l
gene name LOC107730347,LOC107670329,LOC107721263,LOC107549899
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5377251 ~ 5386269 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249322.1
ATAGAGAATATCAGGTTCAGTCGGTCTTGTTGAAACCTGCATAACTACCGAGATGAGGACAAAGCGGAAGGATCGATCAGTTTAAGGATGATGGACCTTTGGTGTCGGCTGTGGCACCTGCCACTCTTGCTGTATCTCACAGGACTCCTGCAGTCTGACCTGTGCAGCGGTCAGCGTCTGGTCCAGATCCAGGAAGGTCCTCTGTATAGAGTAAAAGGATATCCCATCTTCATATCCTGTAATGTTAGTGGGTTTAAAGGCTCACCACTGCAGGATTTTCAATTCATTCTTAAGAAAGGAAATATCGATATAAATATGATCAGCACTTTTGACACAGACTTTCCCTACAGAATGTACTCTGATAGGgtaacaaataaagatattgaGATTCAAAGGTTGTCAGGATCTTCAGTTCTCTTGAGGATCAATGATTTGATGGAGGAGGATGCTGGGGATTTGTTTTGTGAGACGCCAAACACAGATGGCATTTATCTTGGAAGTTATGCTGCCGAAACAAAGCTTAATGTGATTGCAGACACCCTGGAGGCATCATACTCTGGCTCTCCTTCTCAGAGCTTGTCTGAAGGTGATCCTCTTCAGCTTGAGTGTCAGGTCTTCAGCCAGACTTTTCAACATACTCATCTGTCGGTCACCTGGTTTCTCCATGGTGAAGAAGATGAAAACCCCCAGCCAGTCATTACTCTGGACAAAGATCTGACTGTAAAGCCAGGAGCTGGATTTGAGGATCGCTATGGTTCTGGTCTTATCAGCATGGATAAGGTGGAAGACACAACCTACAGGCTGAAGATGTCTCAAGTGCAGCAGTCAGACCAAGGCAAGTTCTTCTGCAAAGCCATTGAGTGGATCCAAGACCCAGACCGCTCCTGGACACAGATTGCCTACAAAACCACCCCAGCATGCGACGTGGAGATCAAATTACTTGTGGCCCCTGATGTGGGCTCGTTCAGTGTAAATCTGAAGGTTTCAAAGGGGCCATTAAAGGAGGGAGATGCACTGGACATCCGTTGCAGTGTGAATGCACAAAACCTTCCTGGTCATTTCTTCTCTGTGACTTGGCTGAAGAACCAGCAGAAAGTGGCCCAGATTGGATCTTCTGGGGTGCTCACTGTCTCTGACAgttacaaagagagagagaatgcagcAGAGATGAAAGCAGTGAAAACCAGTCAGATGGACTATCTGCTGACCATCCGTTCGGCTCGGACTGAGGACCAGGGACAATACCAGTGTGAAGTATGGCAGGAAAACATGAATGAAGATGGCAtcttcacaaaaatacaaaaaaaaatgtccagtcCAGAGACTGTGAGCATCACAGCTAAAGAGAGTGATCTGGCGGTGTTGATGGTGATGAATGACATGGTGACTGAGGGAGATGCACTACGGGTCACCTGCTCAGTGACGGGGTTCAAAGGTCCTTTATCAGTGTCATGGCAACACAAGAAAGACTCCGGGGTTTCCTTCAGTGATGTCATTAGTCTGACCCATGAGGGAGTGATGAAAGATGTTGGGGCAAGATATCAGAGAAGAAATATCCAAACACTTCATTCTCCAGCTGGAAACTTTACTCTGGAGATTGGTGCAGCTGCAACATCTGACAGCGGCGAATATAAGTGCATTGTGTCTGAATGGACAGTACAGAGCAATGGAGAGATGAAGAAAGCCAACACTCAATCTCAGCAAAAAGCCATTCCAGTGAATTCTGTTGAATCTCTAATGAGGGTGAGCTTGAAAAGTCGTACAACAAATGTGCCAATAGATTCTCCAGTAGAGCTGCTATGCACAATCAGAGGGCCTAAAGTGACTTTGGCTGTACGCTGGATGTTTCAGCCTCGCAATTCAACtgttcaaacaaacattttatccATACGCCACACTGGGGAAATGACCTGGACGGCAGATCAGAGAAACTATCAGCTGTCTATTCAAGCTCAGCCGACAGAGACTCGTTTTATTCTCATGATTCCAAGAGTCAGCAAGAAACAAGAAGGACAGTACCAGTGTCAAGTTGATGCCTATCAAAAAGATGTTCAGAAAGCCTTGAAAAACTCTAACCCACTGGCGGTGACTGTACAAAAACCTGtcagcAGGATGAGACTGAACCCACCCACCCCTCATCTGGAAACCACTGTCAACACTGATGCAAAGCTTGAATGTTCAGTCACGAAGACAACCACAAATACCTCTCGTTTCACAATAACATGGAGTTTTGGGTCCCAGATGCTCTTAACTATGGACTTAGATGCTGTTGTCAAGTTTGGCCCTGCAGCTGGCCTAGAGATGGACCAGAGGATCCGTATGGACataagagagaaacagagcttCCAGCTGAATATACAACAGACCAGAACATCTGACAGTGGGAAATATGATTGTGAGGTGGAAGAGTGGCTTCAGGATCCTGTTGGTGACTGGTATTCCCTGAAGAAAATGTCTGTTTCCACAGAGCTGGTTGTTAGAGAGAAAGAAAGTAAACTGCATGTTCAGAAGGAGAACCGAATGCTCAACATTACCAAACATCAGGCTGAGTTCACCATTGACTGTGTCATTGACTCACAAACCAGTGATAAGCCTTTCTTTGAGGTCACCTGGTTCAAAGTTCAGGAGAAAAAAGGACCAGTCACCATGTTCACCGCCAAGCATGATGGGACTTTACACACTGCAATTAGTGAAAAAAATCTTCTGTTTGGACGACCACTAGCCACACACTATAAACTGACTGTACCACAGATCAGCCCCTCTGATATGGGGAAATACTACTGTCAGGTTGAGGAGTGGCTTCTAACTGATAACACCTGGATGAAATTGGGTTCTGATAGATCTGGAGAGCTCTCCATCTATGTTCACACTGAAGGTAATACTGCAAAACTGATAGACCCATTGGTAATATCACTGGCAATTGCTATTCTTCTGATTTGTTCTCTTGTATTGTTCATAATATTGTTGTTGAGAAAGGGCAAAAAGAGGCAATCTGAaccaaagaagaagaagaacaacaaGAAGAAAGACTGTCTGTGGGCTGACAAAAATGGCCTTCCTCTTGTGCCTACTTGCGATTAGATTGTAGTTTAAAAATGCTTATGATCAGATTGCAGTTACTTTTTTATCAGTTGTATGATTACATACATTCCTACAGTAATCATTTAACTTCTAAGAAAATTACTGTATACTAGGCCTATACATTTCCAAATTTTCTATtggctgcatttaaaatctaaaaaaaaaaaaacattttggttgcATGCCTTATCAACATTTCATATCTGACCCACTgctgacaaaacattttaattattatttgacatCATTGAGTCATTTGATGTTTTACTATAAGGATCTAGTGCCACGACTGCCTACATTGGCACATGAAGAAGTTACACTGGTACATGTGCaagacagatatatatatatgtccctAAGTGCCTCACAGCTGCTTGACAATCGATACTTCTAGGTTATCATTTTTTATACCCAAACAGCCTGTTTTACTATGTTAAAatctataaatgttattaatgtatGAGAATTACGCTGTGCCCAAACAGCAGCTCTGATAAGCCACATGTGCAACCACTGCATATCACAAACCACTGAAACTGCAACACAGGCAAAAAAATAGCGGTTCGCTCTATGTTTTTACGCAAGTACGTTTTTCTTCAGTTGTGCTGCACAACTGAGTGAATGGCAGCTTAcagttttgttatatttattactcTTTGCTTTGAGAGCAAAAGAAGTTGCAGTGTTGAGgtttttcaagttttttaaaaatgtcatgtaatgaaaatgacagtaaatagGTTGAAATCTGTTATTCAAAGTCTATCTTAAGTCTGCTTAAATTACGTTTAGGATTGACATGTTTAAAACCTTTAATGGTCTGACGATggcttcagaaatattttaaatggtgcTTTATTTATGTTTCAGTTTGCAAATCAATTAAGCAAGTCTTTGACTAAAAGGCTTttatcacatacacacacaaacacacaaacaataaataaataaaataaaaaaaatcacataataTTGCATTTACCATGCAACAAcacatatagatatagatatagaacTGTACATAAATTTGCTTTTATGTTGGTGATAACATGTTTGCCTTATAACTTGTCTGATCTGCTACCACAAATGAATGATGTCTATGACGTGTATTTTATTCGAATTATTTGTACaccatgtaaatatatttgcatatttgtagacagtgtaaatatattttccatacAACTTTGATGTTGGCTCTGTTGTCTTCATGTTTATGAATGCTTCttcatgtaatgtaatgtttaaagtCCCAatgtaacagaaataaaagaagtaAAACCAC

Function

NR:

description
PREDICTED: immunoglobulin superfamily member 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249322.1 True 4366 mRNA 0.41 9 5377251 5386269

Neighbor

gene id symbol gene type direction distance location
cd58 NA coding upstream 465 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 229080 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 239101 5128137 ~ 5138150 (+)
en1a LOC107670337,LOC107720935 coding upstream 268861 5105850 ~ 5108390 (+)
marco NA coding upstream 277875 5094242 ~ 5099376 (+)
si:dkey-11f4.14 NA coding downstream 203 5386472 ~ 5391186 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 137291 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 242853 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 430576 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 597620 5983889 ~ 6002637 (+)
G67970 NA non-coding upstream 35962 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 63691 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 80246 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 275587 5101359 ~ 5101664 (+)
G67882 NA non-coding upstream 292950 5084043 ~ 5084301 (+)
G68013 NA non-coding downstream 81272 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 360586 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 380070 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 409825 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 447871 5834140 ~ 5914281 (+)
ndufb3 ndufb3,LOC107752587,LOC107549774,LOC107549916,LOC107689503,LOC107720946 other upstream 235099 5140145 ~ 5142152 (+)
LOC122351471 NA other upstream 348612 5025563 ~ 5028639 (+)
c9h2orf76 zgc:101851,cunh2orf76,LOC107670315,LOC107747242,LOC107560816,LOC107752580,LOC107549781,LOC107689495 other upstream 358913 5015470 ~ 5018338 (+)
rbm45 rbm45,LOC107716918,LOC107752596 other upstream 660018 4709053 ~ 4717233 (+)
G67717 LOC107716922,LOC107657385,LOC107725823,LOC107671308 other upstream 814649 4523286 ~ 4562602 (+)
trnar-ccu_4 NA other downstream 18960 5405229 ~ 5405301 (+)
trnar-ccu_5 NA other downstream 19634 5405903 ~ 5405975 (+)
trnar-ccu_6 NA other downstream 21207 5407476 ~ 5407548 (+)
trnar-ccu_7 NA other downstream 21980 5408249 ~ 5408321 (+)
trnar-ccu_8 NA other downstream 22715 5408984 ~ 5409056 (+)

Expression


Co-expression Network