LOC122351912 (LOC107670332,LOC107549921,LOC107689507,LOC107752589,LOC107549740)


Basic Information

Item Value
gene id LOC122351912
gene name LOC107670332,LOC107549921,LOC107689507,LOC107752589,LOC107549740
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5297506 ~ 5319587 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249326.1
TTCCTTATCCAACAGAGGGAAAATAtccacacgcgcacgcacgcacgcactcaTCCACTTCCGGACACGACTGTGCCAATCCAACCCTCCGTCCCGAGTTTTATCGTGCGGCGTGCGCAGATGTACCAGCGTTCGCAACGCTAAAGGACTAAACAGCGCGACTCTCGCAAAACTTAATTCAACTTTACCGAGGGGGAGAGCCGTTCGTCCGCCGCGCGCGCACACGGGAGGATCTCACACTCTCTGCTCGGTTTGAATGACAAAGGCGATCCCGTGGGAAAATCACGCGCTTTCACAAAATGGATAAAGGAACGGGACTCCGTCCTGTGATTCTGATCGTTGCTCTTGtGTCGTTCTGTGAGGCCCGTGTGGTGAAGGTTCCGGTCGGTCCTCTAGTCCATGTTGAGGGGCAAGCTGTCTCCATTCGCTGTGATGTGTCCAACTACGAGGGAACCCGAGATCAGGATTTTGAGTGGGCTTTGGTCCTTGCCGGAGAAAAATTGCTCTCGCTCGTCTCCACTTTTGACAGTAATTTTGTGGACCCTTCAGTGAGGGACCGGGTTAACAGTGGTGACATCAGTTATAATAAGCTGGGAGATGCTGCTATTGAACTCAAATTCAAGAAGGTCAGAGCAACAGACAGTGGATTGTATCGCTGCAGTACTCCGAGCACTGATTCAGTCATCAGCGGGAACTACCATGCCGATGTGGAGCTCAAAGtGATTGGGGACAGTCTGAAGGTGGCTCCAGCCATCCCCAAGTCAGCGGTGTCTGAGGGAGAATCAGTGGAACTCCAGTGCAACACGACTCGGGGCTTCACGGAGCACACCTTCCTCTCCGTCACTTGGTCCATCAGGAAAGGGAGCAACCCCTTGGAGGAAGTCTTGACGTTCGGACCGGATGATAAGATCAAAGTAGGGCTCGGCTACACTCAGCGCTACGCAGATGGTGGACTTCAGTTGGACCTTCGTGGAGGTGGTTTTTATGGACTGGTCCTGAAAAGAGCAAAGCCGTCAGACCAAGGGGAGTATGTTTGTACGGCCCAGGAGTGGGTTAGACAGGGTGAAGAAGGGAAAAACTGGCGCAAGATTCTGGAGAAGTCTGAAGAAATGGGAAAGGTGGTTGTCACACCCACAGAGCTGCAATTCAAGGTGAACCTGACACAATCTCTGAACCCTCAGTCGACAAGCGAGCCCACTGAACTGCGCTGTAAGGTGTTCGACCTCCTCCACctccaagatggccgcctgggCGTGACCTGGTCTTACTCTACAAACGCTCCTGGAGATGTATCTCAGAAGAAAATCACTGTAGCCTCCCTGAATGAACAAGGAGCACTGATTGCAGGCAGTCAGTACCAGCAGAGGCTGGACAGTGGGGACATAGCAGTGACCAGGAGAGAGTCTAACATCTTCATTCTGCGAATGCTTCAGACTCGAGACGCAGACATGGGTTCTTATTCCTGTGTGGTCACAGCATGGAAGCCTGCTCAGCAGAGCggatgggaaaaaaaagcaaaggagGTCCAGTCAGCGCCTGTCACTGTTCAGTGGACACCAAAAATTCCAGTTTTGCAAGTTGTAGCCCATCGTGTGAGAGAAGCCTCGACAGGAGGATCCACATTTGAGATGAGCTGTCTGGTGACTGGTCAGAGCCTGAAGAATCCCGGCTACTCTGTGCTCATCCGCTTTGAGGAGACCTTGGGAGGAAAGTCCCATAAAGTGTTGTCACTTAACCAGGACTCAGTCTTGCAGTTAGAGGAGTGGAGCGAGCCGAGCCGCATCGACAGCGTGGTTCTGGAGAAGACCGGGCAGCTCGAGTACCGCTTCCGCTTGTATGGGGCCCAAGTCACAGATCGTGGGTTCTACTATTGTGATGTCACAGCCTGGACACGGGATCAGAGCCAAGACTGGATCAAAGCCGTCAGTGCGGAGTCCAACAAGATTGAGATCACTTTTGTACACACAGGCCCAGTGTTCAACATATCCATTCATTCAGACGCAAACAATGTGTTGCCGGGGGACACAGTCCAAATGAAGTGCATCGTATCCATCCTGGAAGCGTCACCGAACACTGGTGATATGGCATTTGATGTACGCTGGTTCCAGAACACACACCAGGCTTTAGATAACGGAGTCCAGCCTCTCATCAGTATGGACCGCTGGGGAGTGGTAAAGAAGACCGGCTCCAATGACACCAGTCTGGAGCGCACTGACCGACACACGTTTGTCCTGAGCTTGCACAAGATTCAGGATAGAGATGTGGGAGAATACTACTGTACCGCCACACCTTGGCTCCTGTCTCCTGCTACTGGTGCCTGGAACAAGGAGAAGGACCTAGCCTCGGCTTCAACATTTCTATCAGTCAAAACAGAATTGTGGGAATCCTTGAAGATGCCAGTGGGATACGGCTTGGCTGCTGCTGTGATCGCCGGTGTTCTCTCTGTGCTGCTGGGTCTTGCTGTTGCTCACTGCTGTTTCTCCAGGAACCCCATACACACGCCCCGTCCCCGTAACAAGCTTATTGACCTAGAGATGGATTAAACCAGTCCCCTTTTGCACTGCTGTGATCCTGCCCAAACCACTTCGACCGACTTGATGTATTATGCTTTGGGACAGAATATGGATATGTACATTGTTTAATAAGAGATGGAGAACCTGACTATGTGCACTCTGAGGATTGAGCCACTCCAATTGACAGCTCCATATTCCCACTTGGGATGCAATAATACACTTATTATTCTCAGGAATAGAGCCCTGACGGCCACATccaatgtttatttgttttgtttttttcccctgactGCTGATGGGATGAGAGCACCAGGAATGAAAAATTTTGTTGAGTGCAAATTTGGAGCTGCACAATGGCCCAAACCAGCAATGTTACAGTTTTTACGGCTGATTATGAtgattttatagcatttaataGAAAGGACTCTAAAGAGCCAAGAACTTGTCTGTTGTGAGTGTGGCACAAACTCCAATTTTAGATTGACCTTTTAAACCGCTGCAGTCCCAGAGGCTTTGATTGTCACATCGTCGGCGGACATCCGCCGTGCCCCCCACCCTGCCTGCCTGTCAGAGTTATGCTCGCAACAGTAGGGAACCTAATATGACTGACCACAGGCAAAAGGATATATGGCTGATGGATGAGTGCTTCAAGGCTGCACCGCATCATTCTCAGATCCAGAAGTGACCACTCGAGGGAACGGACCAAACAGGCTGTCAGTCCGTGGCTTGGCTTTAAGCGGCCTGCTTTAAAGATCGCTTGTCAGGCATTTCAAAGGCCCTGATAACTGATATCCACACTGTTGGCATTAACTCATTCCTCACTCTTTTTGCTGGTTCCAGTTTCCCAAACCTGCATTTTTGTCAGAAAGCACTCATTATACTGACACAACTGACCCGCACTGACGTTATTATTGTAGATCTTTTGTACAAATGCTCTCTTTATCCACAACGTGGTCAGATAAGTATTTCTGAGAAGGGAAACTGTTGTTATGAGCGTTTTACTGTATCTCAGAGTGAGAGAGCTATGCAGAGCCTCATTTATAGACAAATGTCAAAAGGAATTTCACCAAGATGTTTTATTGTAGTTCATTTATGGATATTAttaaatggatgttttttttcaaagaa

Function

NR:

description
PREDICTED: prostaglandin F2 receptor negative regulator-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249326.1 True 3641 mRNA 0.50 8 5297506 5319587

Neighbor

gene id symbol gene type direction distance location
ybey ybey,LOC107670327,LOC107720944,LOC107689501,LOC107752586 coding downstream 157507 5138114 ~ 5139999 (-)
insig2 insig2,LOC107549777,LOC107689500,LOC107720943,LOC107670326,LOC107549914,LOC107752584 coding downstream 169408 5122207 ~ 5128098 (-)
steap3 steap3,LOC107689493,LOC107747243,LOC107549780,LOC107752579 coding downstream 275151 5017068 ~ 5022355 (-)
tmem37 tmem37,LOC107752614,LOC107689494,LOC107747239,LOC107670320,LOC107560813 coding downstream 287992 5008185 ~ 5009514 (-)
LOC122351620 rap2a,LOC100332969,LOC103043765,LOC107549783,LOC103391592,LOC105907999,LOC106512668,LOC106582448 coding downstream 311910 4977659 ~ 4985596 (-)
LOC122351913 LOC107670336,LOC107720941 coding upstream 4142 5323729 ~ 5341221 (-)
LOC122351922 NA coding upstream 26573 5346160 ~ 5349103 (-)
bzw1b bzw1b,LOC107689509,LOC107549769,LOC107752595,LOC108435180 coding upstream 71766 5391353 ~ 5394547 (-)
myo1b myo1b,LOC107748838,LOC107664008 coding upstream 143727 5463314 ~ 5521286 (-)
LOC122351910 farp1,LOC107689492,LOC107747234 coding upstream 446743 5766330 ~ 5796149 (-)
G67917 NA non-coding downstream 116006 5141790 ~ 5181500 (-)
G67928 NA non-coding downstream 196729 5099906 ~ 5100777 (-)
G67923 NA non-coding downstream 208113 5089182 ~ 5089393 (-)
G67913 NA non-coding downstream 246214 5050429 ~ 5051292 (-)
G67911 NA non-coding downstream 269909 5027044 ~ 5027597 (-)
G68048 NA non-coding upstream 395754 5715341 ~ 5715637 (-)
G68053 NA non-coding upstream 415337 5734924 ~ 5735172 (-)
G68055 NA non-coding upstream 415750 5735337 ~ 5735783 (-)
G68082 NA non-coding upstream 486353 5805940 ~ 5806327 (-)
G68120 dip2a non-coding upstream 725528 6045115 ~ 6047596 (-)
G67930 LOC107670337 other downstream 189119 5105894 ~ 5108387 (-)
G67912 NA other downstream 268031 5028926 ~ 5029475 (-)
dbi dbi,LOC107560815,LOC107747240,LOC107752581 other downstream 282693 5010513 ~ 5014813 (-)
G67863 farp1,LOC107747234,LOC107670305,LOC107689492,LOC107752600,LOC107549748,LOC101883674 other downstream 313759 4959717 ~ 4983747 (-)
LOC122351456 LOC107747234,LOC107560802,LOC107670305,LOC107752600,LOC107689492,LOC107549748,LOC101883674 other downstream 323551 4856650 ~ 4973955 (-)
LOC122351925 NA other upstream 30368 5349955 ~ 5369589 (-)
LOC122351915 LOC108191338,LOC101883771,LOC101885620 other upstream 77278 5396865 ~ 5399880 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other upstream 593268 5912855 ~ 5931136 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other upstream 723688 6043275 ~ 6043925 (-)
LOC122351979 NA other upstream 779484 6099071 ~ 6099912 (-)

Expression


Co-expression Network