LOC122351925


Basic Information

Item Value
gene id LOC122351925
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5349955 ~ 5369589 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249344.1
AAAAGCAGTACGGATCAACATTAGAAAGTATTTTGAAAGTATACGCGGTATTTTGAAGCCACGAGAAAGAAAGTGACTGAAAAAATCCCTAACCGAAAGTATCGAGCCACTTCTGAAATGGACAGAGACGCTAAAAGGGACGTGTTTTACTTGGTGAACAGTGATGCAGAGATGCACATACAGGAACTTACACTCACTTTCAGCTTGACATCTTCAACTAGAACAACTCAGAGAGCTGGATGAAAATGCTGCTAAACTTAACATTAATTATCTTCAGTTTAATCTTCATGTCCTTCTCtgGTAAATTTGTCTCTTCGTGTATCTACAAAGCCACGGGGGAAAAAGCTGTGATTTCATTCGATGGTGCAAAATTACAAGAGGAATATGAACTGAAATGgacacataataaaaacagagtttattttaaaaaaggctcAAAGGTTAAGGTCAAAGAGCTCGATGTCGATGAAGATGGATCTCTGATACTGACGGACGTACAGAAGGATAAATCTGGAGAGTACAAGGGCATCGTCTATGATTCAGAAGGAAGTTTAATAAAGGAAACCGTACAGCAGCTCTGTGTCCTGGAGCCAGTGTCTGAACCTACAGTCGTGGTGGAGTGTGTAGAAAAAGGAGTAAACCTGACTTGTAGCGCAGAGAACCACCGTGAGGTGCTTGTGTCCTGGATGAGAAATCACATGGAGGCTAATGTGACACATGCTTTTTTACACATCAGTCTGTCCGAGATCAAATCTGGAGATAGTTTCTCATGCACAGTCAGCAACCAGATAAGCCAGAAGTCAGCAAAAGAAGTTCAGCCCGCTTGCTCTGACGCAGATACGTCTGAGAAGAGATTTCTATTTGGCTTGGATTCGTGGTTGATGCTGGTGATCCTGACGGGGGGAGGAAgcttcctcatcctcttcatcatctGCTTAGTCGctgtctgctgctgctgcggacGAAACAAGAGGAAAGCAAAACGTGAAGAACAGCATCAGCTTGTCTCTTTAATGCCGTATCTTTAATACCTAAATCAGCCTGATGAGCAGAAAAAGGCAGCATTCTCTTTCTGCTAGTTATAAAAAGATGAAACTAACCTCAGCTTGATTCACATCGACCTGTATTTGATCTGCTGTTATTAATAAGTACCTGTGGAAATGGAAACATATCACACAGTGATTTACATTCAATCTAAGGATTACATGATCCTTTTTTCTTCACAACTCCTCCAGATGGCAGCAATGTGCTGAAAAAGCAAATCATGCTCCACTGAACTAGTATTAGAAACATAATTGTGTTtgacataaatgtgtgttaacCAGGTCAGATCAAGCAGAGTAAACATtacaaagtattttattttaatatgttcaaTGTTTTCtgttgcaaaataaatgcatagacTATTGTGTGacgtaaaaatgacaaaataaataaataaaataaaa
>XM_043249345.1
CTGAAAAAATCCCTAACCGAAAGTATCGAGCCACTTCTGAAATGGACAGAGACGCTAAAAGGTAAACGCACCTTTACGCGAGCCCTAAACAGGATATAGTGCTCCTGCTGGGACGTGTTTTACTTGGTGAACAGTGATGCAGAGATGCACATACAGGAACTTACACTCACTTTCAGCTTGACATCTTCAACTAGAACAACTCAGAGAGCTGGATGAAAATGCTGCTAAACTTAACATTAATTATCTTCAGTTTAATCTTCATGTCCTTCTCtgGTAAATTTGTCTCTTCGTGTATCTACAAAGCCACGGGGGAAAAAGCTGTGATTTCATTCGATGGTGCAAAATTACAAGAGGAATATGAACTGAAATGgacacataataaaaacagagtttattttaaaaaaggctcAAAGGTTAAGGTCAAAGAGCTCGATGTCGATGAAGATGGATCTCTGATACTGACGGACGTACAGAAGGATAAATCTGGAGAGTACAAGGGCATCGTCTATGATTCAGAAGGAAGTTTAATAAAGGAAACCGTACAGCAGCTCTGTGTCCTGGAGCCAGTGTCTGAACCTACAGTCGTGGTGGAGTGTGTAGAAAAAGGAGTAAACCTGACTTGTAGCGCAGAGAACCACCGTGAGGTGCTTGTGTCCTGGATGAGAAATCACATGGAGGCTAATGTGACACATGCTTTTTTACACATCAGTCTGTCCGAGATCAAATCTGGAGATAGTTTCTCATGCACAGTCAGCAACCAGATAAGCCAGAAGTCAGCAAAAGAAGTTCAGCCCGCTTGCTCTGACGCAGATACGTCTGAGAAGAGATTTCTATTTGGCTTGGATTCGTGGTTGATGCTGGTGATCCTGACGGGGGGAGGAAgcttcctcatcctcttcatcatctGCTTAGTCGctgtctgctgctgctgcggacGAAACAAGAGGAAAGCAAAACGTGAAGAACAGCATCAGCTTGTCTCTTTAATGCCGTATCTTTAATACCTAAATCAGCCTGATGAGCAGAAAAAGGCAGCATTCTCTTTCTGCTAGTTATAAAAAGATGAAACTAACCTCAGCTTGATTCACATCGACCTGTATTTGATCTGCTGTTATTAATAAGTACCTGTGGAAATGGAAACATATCACACAGTGATTTACATTCAATCTAAGGATTACATGATCCTTTTTTCTTCACAACTCCTCCAGATGGCAGCAATGTGCTGAAAAAGCAAATCATGCTCCACTGAACTAGTATTAGAAACATAATTGTGTTtgacataaatgtgtgttaacCAGGTCAGATCAAGCAGAGTAAACATtacaaagtattttattttaatatgttcaaTGTTTTCtgttgcaaaataaatgcatagacTATTGTGTGacgtaaaaatgacaaaataaataaataaaataaaa
>XM_043249346.1
AAAGCAGTACGGATCAACATTAGAAAGTATTTTGAAAGTATACGCGGTATTTTGAAGCCACGAGAAAGAAAGTGACTGAAAAAATCCCTAACCGAAAGTATCGAGCCACTTCTGAAATGGACAGAGACGCTAAAAGTGATGCAGAGATGCACATACAGGAACTTACACTCACTTTCAGCTTGACATCTTCAACTAGAACAACTCAGAGAGCTGGATGAAAATGCTGCTAAACTTAACATTAATTATCTTCAGTTTAATCTTCATGTCCTTCTCtgGTAAATTTGTCTCTTCGTGTATCTACAAAGCCACGGGGGAAAAAGCTGTGATTTCATTCGATGGTGCAAAATTACAAGAGGAATATGAACTGAAATGgacacataataaaaacagagtttattttaaaaaaggctcAAAGGTTAAGGTCAAAGAGCTCGATGTCGATGAAGATGGATCTCTGATACTGACGGACGTACAGAAGGATAAATCTGGAGAGTACAAGGGCATCGTCTATGATTCAGAAGGAAGTTTAATAAAGGAAACCGTACAGCAGCTCTGTGTCCTGGAGCCAGTGTCTGAACCTACAGTCGTGGTGGAGTGTGTAGAAAAAGGAGTAAACCTGACTTGTAGCGCAGAGAACCACCGTGAGGTGCTTGTGTCCTGGATGAGAAATCACATGGAGGCTAATGTGACACATGCTTTTTTACACATCAGTCTGTCCGAGATCAAATCTGGAGATAGTTTCTCATGCACAGTCAGCAACCAGATAAGCCAGAAGTCAGCAAAAGAAGTTCAGCCCGCTTGCTCTGACGCAGATACGTCTGAGAAGAGATTTCTATTTGGCTTGGATTCGTGGTTGATGCTGGTGATCCTGACGGGGGGAGGAAgcttcctcatcctcttcatcatctGCTTAGTCGctgtctgctgctgctgcggacGAAACAAGAGGAAAGCAAAACGTGAAGAACAGCATCAGCTTGTCTCTTTAATGCCGTATCTTTAATACCTAAATCAGCCTGATGAGCAGAAAAAGGCAGCATTCTCTTTCTGCTAGTTATAAAAAGATGAAACTAACCTCAGCTTGATTCACATCGACCTGTATTTGATCTGCTGTTATTAATAAGTACCTGTGGAAATGGAAACATATCACACAGTGATTTACATTCAATCTAAGGATTACATGATCCTTTTTTCTTCACAACTCCTCCAGATGGCAGCAATGTGCTGAAAAAGCAAATCATGCTCCACTGAACTAGTATTAGAAACATAATTGTGTTtgacataaatgtgtgttaacCAGGTCAGATCAAGCAGAGTAAACATtacaaagtattttattttaatatgttcaaTGTTTTCtgttgcaaaataaatgcatagacTATTGTGTGacgtaaaaatgacaaaataaataaataaaataaaa
>XR_006251815.1
AAAAGCAGTACGGATCAACATTAGAAAGTATTTTGAAAGTATACGCGGTATTTTGAAGCCACGAGAAAGAAAGTGACTGAAAAAATCCCTAACCGAAAGTATCGAGCCACTTCTGAAATGGACAGAGACGCTAAAAGGGACGTGTTTTACTTGGTGAACAGTGATGCAGAGATGCACATACAGGAACTTACACTCACTTTCAGCTTGACATCTTCAACTAGAACAACTCAGAGAGCTGGATGAAAATGCTGCTAAACTTAACATTAATTATCTTCAGTTTAATCTTCATGTCCTTCTCtgGTAAATTTGTCTCTTCGTGTATCTACAAAGCCACGGGGGAAAAAGCTGTGATTTCATTCGATGGTGCAAAATTACAAGAGGAATATGAACTGAAATGgacacataataaaaacagagtttattttaaaaaaggctcAAAGGTTAAGGTCAAAGAGCTCGATGTCGATGAAGATGGATCTCTGATACTGACGGACGTACAGAAGGATAAATCTGGAGAGTACAAGGGCATCGTCTATGATTCAGAAGGAAGTTTAATAAAGGAAACCGTACAGCAGCTCTGTGTCCTGGAGCCAGTGTCTGAACCTACAGTCGTGGTGGAGTGTGTAGAAAAAGGAGTAAACCTGACTTGTAGCGCAGAGAACCACCGTGAGGTGCTTGTGTCCTGGATGAGAAATCACATGGAGGCTAATGTGACACATGCTTTTTTACACATCAGTCTGTCCGAGATCAAATCTGGAGATAGTTTCTCATGCACAGTCAGCAACCAGATAAGCCAGAAGTCAGCAAAAGAAGTTCAGCCCGCTTGCTCTGACGCAGATACGTCTGAGAAGAGATTTCTATTTGGCTTGGATTCGTGGTTGATGCTGGTGATCCTGACGGGGGGAGGAAgcttcctcatcctcttcatcatctGCTTAGTCGctgtctgctgctgctgcggacGAAACAAGAGGAAAGCAAAACGTGAAGAACAGCATCAGCTTGTCTCTTTAATGCCGTATCTTTAATACCTAAATCAGCCTGATGAGCAGAAAAAGGCAGCATTCTCTTTCTGCTAGTTATAAAAAGATGAAACTAACCTCAGCTTGATTCACATCGACCTGTATTTGATCTGCTGTTATTAATAAGTACCTGTGGAAATGGAAACATATCACACAGTGATTTACATTCAATCTAAGGATTACATGATCCTTTTTTCTTCACAACTCCTCCAGATGGCAGCAATGTGCTGAAAAAGCAAATCATGCTCCACTGAACTAGTATTAGAAACATAATTGTGTTtgacataaatgtgtgttaacCAGGTCAGATCAAGCAGAGTAAACATtacaaagtattttattttaatatgttcaaTGTTTTCtgttgcaaaataaatgcatagacTATTGTGTGacgtaaaaatgacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249344.1 True 1451 mRNA 0.40 6 5366087 5369589
XM_043249345.1 False 1424 mRNA 0.40 6 5366087 5369513
XM_043249346.1 False 1426 mRNA 0.40 6 5366087 5369588
XR_006251815.1 False 1432 transcript 0.40 7 5349955 5369589

Neighbor

gene id symbol gene type direction distance location
LOC122351922 NA coding downstream 852 5346160 ~ 5349103 (-)
LOC122351913 LOC107670336,LOC107720941 coding downstream 8734 5323729 ~ 5341221 (-)
LOC122351912 LOC107670332,LOC107549921,LOC107689507,LOC107752589,LOC107549740 coding downstream 30368 5297506 ~ 5319587 (-)
ybey ybey,LOC107670327,LOC107720944,LOC107689501,LOC107752586 coding downstream 209956 5138114 ~ 5139999 (-)
insig2 insig2,LOC107549777,LOC107689500,LOC107720943,LOC107670326,LOC107549914,LOC107752584 coding downstream 221857 5122207 ~ 5128098 (-)
bzw1b bzw1b,LOC107689509,LOC107549769,LOC107752595,LOC108435180 coding upstream 21764 5391353 ~ 5394547 (-)
myo1b myo1b,LOC107748838,LOC107664008 coding upstream 93725 5463314 ~ 5521286 (-)
LOC122351910 farp1,LOC107689492,LOC107747234 coding upstream 396741 5766330 ~ 5796149 (-)
LOC122351461 si:dkeyp-118h9.7,LOC107689504,LOC107549742,LOC107752607,LOC107549895,LOC107720938 coding upstream 504004 5873593 ~ 5874656 (-)
LOC122351462 LOC107549895,LOC107689504,LOC107720938,LOC107752607,LOC107549742 coding upstream 505080 5874669 ~ 5875367 (-)
G67917 NA non-coding downstream 168455 5141790 ~ 5181500 (-)
G67928 NA non-coding downstream 249178 5099906 ~ 5100777 (-)
G67923 NA non-coding downstream 260562 5089182 ~ 5089393 (-)
G67913 NA non-coding downstream 298663 5050429 ~ 5051292 (-)
G67911 NA non-coding downstream 322358 5027044 ~ 5027597 (-)
G68048 NA non-coding upstream 345752 5715341 ~ 5715637 (-)
G68053 NA non-coding upstream 365335 5734924 ~ 5735172 (-)
G68055 NA non-coding upstream 365748 5735337 ~ 5735783 (-)
G68082 NA non-coding upstream 436351 5805940 ~ 5806327 (-)
G68120 dip2a non-coding upstream 675526 6045115 ~ 6047596 (-)
G67930 LOC107670337 other downstream 241568 5105894 ~ 5108387 (-)
G67912 NA other downstream 320480 5028926 ~ 5029475 (-)
dbi dbi,LOC107560815,LOC107747240,LOC107752581 other downstream 335142 5010513 ~ 5014813 (-)
G67863 farp1,LOC107747234,LOC107670305,LOC107689492,LOC107752600,LOC107549748,LOC101883674 other downstream 366208 4959717 ~ 4983747 (-)
LOC122351456 LOC107747234,LOC107560802,LOC107670305,LOC107752600,LOC107689492,LOC107549748,LOC101883674 other downstream 376000 4856650 ~ 4973955 (-)
LOC122351915 LOC108191338,LOC101883771,LOC101885620 other upstream 27276 5396865 ~ 5399880 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other upstream 543266 5912855 ~ 5931136 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other upstream 673686 6043275 ~ 6043925 (-)
LOC122351979 NA other upstream 729482 6099071 ~ 6099912 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other upstream 877311 6246900 ~ 6261069 (-)

Expression


Co-expression Network