evx2 (evx2,evx2a,LOC107657379,LOC107671304)


Basic Information

Item Value
gene id evx2
gene name evx2,evx2a,LOC107657379,LOC107671304
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 4367160 ~ 4371591 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249363.1
tcGGAGAGAGGGAGTGGGAGAGAGCCAGAACAGAAGGAAGGAACAATAGAGAATCAAAGCATAATGATATTCCTAAATGAAGAGGGAAATGTTGCCGCGCTCATTTTATTAATCAGACTGTCAATTTCACCCCAGAGGCCAACCCCAGGAGCCATCTAAAACAGACTCAGATCAGAAGCTGCTCTCCTcacttctcctctctctctccacctggATGTACGCGTCTGGCCGATCAAGGGCCGACTCTATCAAGCGATGACAGTCTCTCTCctatttatttgcttataaaCCTGTTACAATAAATGATCATTCGAGCCGCGTCACGCGCACCTTTAACGACGAAGGCGCAAACCACTTTTTGATGAATGACTTTCTGGACCAGAGAGGATGCGCGGGTCATTTTGAGCAGTCATTCGTCGCCCGCGTACCGGCattcctctgtttttttttcctgcttccAGCTCATAAAGGTGTTATATTATTTAGAGGCGGCAGCTGAGCTGAATGCGGATTAGATCCGCCACCAGTCATCGGAGCACCAGCCCTGGGACTTTGGATTTTTTCTGCACGACTTCATGATGGAGAGGATAAGAAAAGAAATGATTCTGATGGAAAGGGGACTACACAGTCCAGTGGCGGGAAAGAGGCTCTCCAACCTCTCCGACTCGGCCGGGAACGCGGTGCTCGAGGCCCTGGAAAATTCTCAGCACGCGGGTCGCCTCAGTCCGAGAATAACTTCTGCCTCGCTGCATGGCAGCCTCGGGGATATTCCCACCAAAGGCAAGTTCGAAATCGACAGCTTGTTTGGGAACCACCACGGCGACAACACCTCCTCCACGGAAGTGTCGTCCTCCGAAAGCAGGAAGAAAATAAACCTGTACCCCGAAGTTTCTCCCGACTCCGACATGAACAGCGACGTGGAAGTGGGCTGCCCGTCTCACCGATCACCGGGCAGCATCAGCCAGCAGAAGGAAAACAACAGCAAAGGTTTTTCCGACAGTAATTCGGGAACCTCCAATACGAGTTCGTCGTCTCTATCGAATATTAACGGTTCCATCGGTAACTCCGGCAGCTCGAGCTCGGACCAGGTGAGGAGGTACCGGACTGCGTTTACCCGGGAACAGATCGGAAGACTGGAGAAAGAGTTTTACAGGGAAAACTACGTCTCGAGACCCAGGAGATGTGAACTGGCCGCGGCATTAAATTTACCCGAAACGACGATAAAGGTGTGGTTTCAGAACCGACGAATGAAGGACAAGCGGCAGCGGCTCGCCATGTCCTGGCCACATCCCGCCGATCCCAGCTTCTACACCTATATGATGACGCACGCGGCCGCCACCGGAAGTCTGCCTTACCCTTTCCATTCCCACATGCCACTACACTATTACCCCCATGTCGGTGTCACGGCAGCAGCTGCCGCGGCAGCCGCCTCAGGAGCCGCCTCTTCACCTTTTGCTACCTCTATACGTCCCCTCGATACTTTCCGTGCGCTTTCTCATCCGTATTCGCGCCCAGAGCTGTTGTGTAGTTTCCGGCACCCAGGACTATACCAGTCACCGGCGGGTCTGAACAGCTCCGCGGCGGCgtcggcggcggcggcggctgcGGCGGCCGCTGCGGCGGTGAGCGCGCCTTCGGCCGCGGGGCCGTGCTCGTGTCTCAGCTGCCACAGCAGCCAGGCCGCCAGCGCTCTGGGCTCCAGGAGCGCCGGCTCTGATTTCACCTGCACAGCGACAGGGCAGAGGTCCGAGAGCGGATTTTTGCCATACTCGGCAGCGGTTCTCAGCAAAACCGCGGTGCCCTCGCCGGACCAGAGAGAAGAAAGCGCGCTCAATAGATAGCTTAGCACCGGCACACGCTCTTTTATTTGAAGCACATgcggttattattattattattattattatttatttttgttaaattgcGGGACGGCATTTCCATTCCAGTAAGGCCTGTAGCGCCCAGAATTATAtaagaaaactatttaaaatacactgttATTGAAATCAAGGCCTTTTTTTAAACGCGTCAAAACACTGCGTTATAGAACGAGcgtttttgatttattgtttttaaaacgcGAGTAGcatagaaattattttatttattcttatttattacgCAGATATCCTTTTCGATTAGACCGGACTACAGTTTAGAGGATATACACTGGTTGTGCCACTTCAGCATCGGTTAAGGGACCAGGCGTAGGAGAAGGATGCTCTTCTGAAAGTGCTGCTGCTCGagggactctctctctctctctctctctctctctctctttttccctctttctctctcccagaCGCAGGAGTGCGGCGCGTAAAACCCGCACTGCTGCCGCAATGTCAATTCTGCTGTTAATAATGTGAAGATTATGACGAAAATTGCCAATCATGTACCTTGATGGACCTCCTTTGAATGTGGAAACGTAAGAAAGTTCCCGTTCCGAGACTCGCTGTCAAAGCATAACAACCCGCCGTGGGAAGTCATTAGACGAGATAGATAAAAGACCTTGAGCATCTCGCGTTGTTCTCGGTGTGTAGATTGTACAGTATTAAACGTGGTATTCGTTACCtgagatttctttttttattattattttaaaaaaaaaaattccctttCCACCGAGTCCTATTTCCAATCTTCTTATTGGAACGCTGGTCGGCCTGggtagacttttttttttctcagagatGTTCCGCTGATGCGAGCAGTCTCATTAAATCCAAACCGATATTTCCATAATACTCCCAGTAGAGACTCTTCACTCACAATATAATGGGATTATCCACACAACCCCAAACTTCAGACAAATTGCTCATGCATTTCTGTctgcatacatatttttttttttggtcaccgGGCGGAATTCTGCCTTAcataaaaccacatttttaaaaatagcgaAATAGCACTTGTACAGATCAAACGGTGAGATATTTTATCACAACACGCACAGTCAcgtttaaattgtattaaaccGAAATTTTGAcacggattttttttttaaatatgttatttaatttacgTGAGTTGCTGGGTGTTTATTTAACGATTGCTTTAGGCATATAAACAATCTGACTTTGATTCTGACTACAgaacgatttaaaaaaaatacaatattaggCCCGAAATCATGTTGCAAGCCGGGATGGTCACTCATTGTATATAAAGCACATCGCATCGCTGtttccatttcaaatgaaaaaaaaaaaaaagaaaattaaaaataaaaacatttttttttaccatcacCGAGTTGTCGCGCGGGGCTGGCCGCCGTCTGTTCAATAAACGACAATACTAAAATCCCAGTGTTTTTGCTCCTCTCCCAAGGGTTGCCGTGATACACGACTCTGTACATTACGTCTCTGTATTTTACATATTGCCGACTGTatgaattttcatattttcacttgagaaaaatgtgcaatataaaaatgtatattatgttatttattgatGGTGTTGTtcttggaaaataaatatttaa

Function

symbol description
evx2 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within ventral spinal cord interneuron specification. Predicted to be active in nucleus. Is expressed in interneuron; mesenchyme pectoral fin; and spinal cord interneuron. Orthologous to human EVX2 (even-skipped homeobox 2).

NR:

description
homeobox even-skipped homolog protein 2-like

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09320 EVX; homeobox even-skipped homolog protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249363.1 True 3496 mRNA 0.47 3 4367160 4371591

Neighbor

gene id symbol gene type direction distance location
lnpa lnpk,lnpa,LOC107742983,LOC107657390,LOC107725829,LOC107600748,LOC107671324,LOC107588227 coding downstream 5191 4351702 ~ 4361969 (-)
atp5mc3a atp5g3a,atp5g3,LOC108424356,LOC107739460,LOC108266717 coding downstream 144893 4218896 ~ 4222267 (-)
atf2 atf2,LOC107671311,LOC107739459,LOC107657392,LOC107742976,LOC107600703 coding downstream 148666 4197917 ~ 4218494 (-)
chn1 chn1,LOC107742958,LOC107739458,LOC105007244 coding downstream 170893 4158860 ~ 4196267 (-)
gpr155a gpr155,LOC107657393,LOC107600701,LOC107671327 coding downstream 227040 4127366 ~ 4140120 (-)
nfe2l2a nfe2l2a,LOC107716922,LOC107725823,LOC107671308,LOC107657385 coding upstream 185535 4557126 ~ 4571116 (-)
prkra LOC107747227,LOC107670311,LOC107560808,LOC107561731,LOC107689486 coding upstream 403404 4774995 ~ 4780677 (-)
casp10 LOC107560797,LOC107561720 coding upstream 410109 4781700 ~ 4791739 (-)
stk24a stk24a,LOC107560805,LOC107747230,LOC107670316,LOC107561729,LOC107689524,LOC107752612,LOC107705591,LOC103357793 coding upstream 481358 4852949 ~ 4859666 (-)
slc15a1a LOC107752613,LOC107689491 coding upstream 489301 4860892 ~ 4869233 (-)
G67665 NA non-coding downstream 150277 4124730 ~ 4216883 (-)
G67605 NA non-coding downstream 320447 4046486 ~ 4046713 (-)
LOC122351402 NA non-coding downstream 343766 3989592 ~ 4023394 (-)
G67597 zak,LOC107657350,LOC107718456,LOC107600726,LOC107671274,LOC107742952,LOC107588248 non-coding downstream 385970 3979275 ~ 3981190 (-)
G67581 NA non-coding downstream 420255 3945319 ~ 3946905 (-)
G67710 NA non-coding upstream 52386 4423977 ~ 4424298 (-)
G67712 NA non-coding upstream 55697 4427288 ~ 4427646 (-)
G67733 NA non-coding upstream 179646 4551237 ~ 4551875 (-)
G67730 NA non-coding upstream 180833 4552424 ~ 4555750 (-)
G67747 NA non-coding upstream 264419 4636010 ~ 4636342 (-)
wipf1a LOC107657348,LOC107600727 other downstream 216921 4142290 ~ 4150239 (-)
G67668 NA other downstream 245057 4120463 ~ 4122103 (-)
dgkh dgkh,LOC107713732,LOC107549907 other downstream 859868 3437756 ~ 3507292 (-)
G67358 gpx4a other downstream 1172668 3189847 ~ 3194492 (-)
serp2 NA other downstream 1321853 3017043 ~ 3045307 (-)
pde11a pde11a,LOC107657382,LOC107671328 other upstream 244251 4615842 ~ 4666654 (-)
LOC122351499 LOC107670334,LOC107747232 other upstream 420833 4792424 ~ 4822965 (-)
LOC122351456 LOC107747234,LOC107560802,LOC107670305,LOC107752600,LOC107689492,LOC107549748,LOC101883674 other upstream 485059 4856650 ~ 4973955 (-)
G67863 farp1,LOC107747234,LOC107670305,LOC107689492,LOC107752600,LOC107549748,LOC101883674 other upstream 588126 4959717 ~ 4983747 (-)
dbi dbi,LOC107560815,LOC107747240,LOC107752581 other upstream 638922 5010513 ~ 5014813 (-)

Expression


Co-expression Network