LOC122351943


Basic Information

Item Value
gene id LOC122351943
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 10411680 ~ 10415823 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249379.1
GTGACAAGTGGCTTTCTCTCACAGCATGCATTTAACTAGATACGCGCAAGGAGAATATTACTTGtcatttctgttaaaataatcACTTATTTAGACAAAAGTGAATAAAACGTTCTTGCGTTTTAAGCTATGCAACAACCTGCTGTcataccatttttatttattaatttttttccatgcCGATTCATTGTGCAAATTTAACCCCAaattgtgaacaaaaaaaaataaaatgttttgtctgttaACAGAAATAACTAGTCGGCAGAGTTgtctaataaatatttattgaatagaTTGTTAAATGATGAATAAgataattataaattacattcatttatttaataattgttaataattaaattaaacgtaAACAATCAAATGAAAGATTACTTCAATGGCTGCTTGcgtaattatatatgaatagcattaaaaatgaatagaaacaaaatgatgaaaaacaaatgtaggATTGCTACCCAGAAGCAGCGCACATAGTTAGCGTTCGAGGATCCATAGATCCTTCAAAACATACAGAAGGTATAAACTCCCTTGGTGACCACACAGAGTCCACCCAATACCCCAGCAGAAACTTTAGCCGTCCTGCCGTAGTGGCTCTAGctcaaatgtcatttgtttaaTATGAATGGATCTGTACTCATCTTTGCACGTTCTGGTAATATAGATGAGACGCATTCGTCTAAAGTGTATGAACTCACAATTAAGGCGAAATAAAGAGTATAGCCCTTttgatgttgtttatttatgaaCAGGCAAAATGTTCTAAATTGTAATATGTTTCCAAAATGGCatcaaatcaaaactaaaagCATTATAGAACATCACAGTTAACTTGAATCTATcgaaatgtatttgttatatgCAGGTGTTGTATgcaaattgttatattattttcttgctATTCTTgctattttcacatttaaaaaaaaacacatttatatttagttgttaATATGTGGGTGTGTAGTTATATAcagttacataaataaaaatgtcaaataatggCCTGTATTATATGCTATTcagaaagaaaggaaatataatataataactgttatttagttatttaataacTGTTTAACTTTATCCTAGGTGATTCAGGCCTACATGGTTTACCTAAAGGAAGCGGGAATTGAGTCCAAACACCTGCATTctgattaaataatgtttatcggtactaaaatgcatgttatgtaACATGCACAGAGGTAACTGTGGAAGACAGAATAAGCGTGTAGTCTAATATGTCTAACGCCGGTTAATTATTCATGTGCAAGTGTAGAGTTACAAGCTCACCGTCTCCATGGAAACCTAGCGTGACTTCTTTCATGCGGTAAGAAATGGTCATCGCTTGCAATATGTCCTTAACGCGTTTGGATCAAAAACAGCacttcagcaccatggacaagATCGAGCAACTAAACCCCATCGACATGTAAAGAGCGTTTCCGCGCGGAGAGGGACATGGAGAAGCAAGGCAGGCTGGCTAccacaaataaaagtaattatatacACGTAAAGGTTACCAAACAAGCAAGCTGACGTGTTTAACGCTTTTCGGGTGACTTGCTGTAGAGAGTTGTTCTGAGCAAGGGCACGATGGTGATAGATCCCTCGCGGGCTCTGAACCAACAACCTTTCACAAACCAGCCCGAATATTTAGACGCCGAAGGCGCCCGCTGCGATGTTTAAGAAAATCAACGCGGTTTTCCGTCCGAACCATCCCGGATCTCGCTCGCGGGACAGGTTCAGGGCCAGCGAGGACTACCACAGCGCGTGCACGGTCAAACTGGTCCGGAGCACGTCCATGCTCGTGGTGGGGGAGAGCGGTCGCGCGCCGCGGGACCCCGCGCTGAAGAGGAGCGCGAGCGCCGTGAGCGTCGAGGCCAGCACCGCCCTGTACTACTACCAAAGCCGAGAGGACCGAGTGTGGCTCTACTCCCAGAACCAGAACTGCTTGGAGTACTTACAGGAACTGGTCGCGCTCAGGAGGCAGTACACCAAGAGCATCAACGACCTCAAGAGCGGCGAGCGCAAAGAGACCGCGTCCCGCAAGAAGAACCCCGCGCCCCGGCCACCGCAAAACAGAGCTGCACAGactTCGAGGCCTGAACCTTCTGCTCCACCAATCCCAAATGAGGAAGACACACTCCAGTTCTTCGATGCAGTCATTGCAAGCTGCGACCCAGAGCCCAGTCGAAAACCACACGTGGACAATGGGCATGCGGACGTAGACTTCATAGTGGCAACCAGTACCAGCGAGCATGACCTTCACTCTAACTGGGTGCTTCGAGATCCTCGCCGAATCTCCATGACAGAGTCCCAACCCAAGAATCCAGAAATCAGTCATGGGCAGGCAGCCCAGCGGAAGGGGGACATGGGAAGCACAGGCAGCAGGAGACGTCTACAACGAAACCCAATCCACCTGCCAAAAGTGGTGGAGAGTGCCTTTCAGACTTTGCGTTTCAAACCCAAGCTCAAGAAGAAAGACTAGCGGCTTAAGCTGTTCCACCGCTTGTGCCCAGAGGACGACTTGAACTTCACGAAGTTGGAGCTGGAAGCAAGAATAAGGAACAATCTGACTCACCACAGAAGATGTGAGCTCTGTGACGTAATGTCAGTGCTTACTCACTGCCAGAGCTTCATAAATTATCCACAGCAGATCAGAATCTCTCGTTCAGTAGCTCTCCATAGCGAATGTTTAAGGCCATTAACAGAGCGTAACCACTGAACAATCACCCTGCGCACTGATTCCAGACAGAGCAACTGGAATTTTCTTATCACATTAACACAGATCTGAGATCTGATGAGCAAAACACATCAAGGCCAAGGGGCTAGCTATTAACTGCCTGGCTATGATAGGTGAgtcttaaagggacggttcacgccaaaatttaaattctgtcgtcatttactcatcctcaagtagttacaaatctgtatgaatttctttgttctgctgaaaggaaaggaaaatgcTTTGAAGAAAGTtggttgttttgggtcaccattgactcccatagtattttttcctcCTACGGAAGTCAGCGGTGACCCAAgacaactttatttaaaatatcttccgtTGTGTTCGGTACAACAAAGATATTCACGCGGGCTTGGATCTACTtgagaatgagtaaataatgacagaatttgaatttttaagcGGACTAATCCTTTAATGCAAAGCTAACACCTATGCCCTGCATTTAAATCTaatcaaatacagtaaaacgaTGGGGATCATTACTGTagtatttctttatataaatcCCTCCAACTTGTACTAGGTGCCTTAGTGTGTAGGTTTGTAcgatcttttttttgttataatgacTATGATGATTTATGTTAAGGAATAGTTTAAGTAAGCTAAGCAGCAAAAGACCGTCCAATTGTGTGTGAACTACTTCAGCTACTGTTCAAGTGTTGTATTTCTActagtattttttaaaacattaaagcctATAAAGAGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249379.1 True 3499 mRNA 0.42 3 10411680 10415823

Neighbor

gene id symbol gene type direction distance location
LOC122351200 LOC107663844,LOC107555219,LOC107706096,LOC107706098,LOC107663847 coding upstream 3642 10405983 ~ 10408038 (+)
LOC122351198 LOC107706096,LOC107663847,LOC107663844,LOC107555219,LOC107706098 coding upstream 6185 10402345 ~ 10405495 (+)
dcbld2 dcbld2,LOC107600392,LOC107655516,LOC107706081 coding upstream 131777 10262378 ~ 10279903 (+)
LOC122351607 abi3bp,LOC107748202,LOC107655519 coding upstream 185028 10208849 ~ 10226652 (+)
impg2a impg2,LOC107748205,LOC107655518,LOC107600387,LOC107720123 coding upstream 210852 10185746 ~ 10200828 (+)
spryd7b spryd7b,spryd7,LOC107655514 coding downstream 26247 10442070 ~ 10446473 (+)
cenpj cenpj,LOC107663885,LOC107720130 coding downstream 63599 10479422 ~ 10487305 (+)
arhgap20 arhgap20,LOC107706091,LOC107663900 coding downstream 90487 10506310 ~ 10515066 (+)
dnajc3a dnajc3,dnajc3a,LOC107663878 coding downstream 110322 10526145 ~ 10531299 (+)
hs6st3b hs6st3b,LOC107555209,LOC107733651,LOC107663930,LOC107600438,LOC107720131,LOC107655503 coding downstream 142818 10558641 ~ 10602491 (+)
LOC122351843 NA non-coding upstream 232300 10175048 ~ 10179380 (+)
G69042 NA non-coding upstream 303496 10107840 ~ 10108184 (+)
G69034 NA non-coding upstream 340789 10070658 ~ 10070891 (+)
G69033 cx45.6,LOC107663873,LOC107748213,LOC107572527,LOC107655501,LOC107720145,LOC107600426 non-coding upstream 349244 10062208 ~ 10062436 (+)
G69032 NA non-coding upstream 349793 10061685 ~ 10061887 (+)
G69089 NA non-coding downstream 4659 10420482 ~ 10420692 (+)
G69090 NA non-coding downstream 6220 10422043 ~ 10422253 (+)
LOC122351945 NA non-coding downstream 7391 10423214 ~ 10435142 (+)
G69080 NA non-coding downstream 32878 10448701 ~ 10457161 (+)
G69075 NA non-coding downstream 33184 10449007 ~ 10458086 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other upstream 16450 10328731 ~ 10395230 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other upstream 236897 10167336 ~ 10174783 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other upstream 298324 10092350 ~ 10113356 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 844683 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 1250859 9156045 ~ 9160821 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other downstream 605913 11021736 ~ 11030409 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 1049781 11465604 ~ 11490149 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other downstream 1630676 12046499 ~ 12155804 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other downstream 2019165 12434988 ~ 12452365 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other downstream 2211712 12627535 ~ 12629535 (+)

Expression


Co-expression Network