gcgb (gcgb,gcg,LOC107730589,LOC107677918,LOC107722905,LOC107674768,LOC105907977)


Basic Information

Item Value
gene id gcgb
gene name gcgb,gcg,LOC107730589,LOC107677918,LOC107722905,LOC107674768,LOC105907977
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 26065212 ~ 26067013 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249390.1
GGGCATCACTATATAAGACTCAGAACATCAGGCTGGGACCGTGAAATCGCTCtgggagccaggaaggagaaaCCAGTGAGGCAACATCAAAATcttttgactttatttctccGTGAGGACCCGACGCAACCCAGGTAAGATGATGACAAAGATCTACGCCTTCATTGGACTTTTACTTCTTATTCTGATCCAGAGCAGCCTGCAGATGCCCATACAAGAAAACATGGAAGATAACTCCAGCCTTATGTCCGAGGACGCACTATTTAATGACCCAAGAGAAGCAAACAACATGAAGAGACATTCAGAAGGCACATTCTCAAACGATTACAGCAAATACCTGGAGACCAGGAGAGCACAAGACTTCGTTCAGTGGTTAATGAACTCCAAGAGAAGCGGAGTCCCCACGCGACGGCACGCAGACGGCACATTCACCAGCGACGTCAGCTCTTACCTGCAGGACCAGGCGGCAAAAGAGTTTGTGTCCTGGCTCAAAACGGGGAGAGGACGACGGGAATGAGGACTGGCGGCGACCAGATAAAAACTAGCCTGCTCGACTCTGTTTTATAACGCCTAGTGCTGTCAGTTTCTCCGAATCATGCAAATAAATCTTTCTTCAAATGAA

Function

symbol description
gcgb Predicted to enable glucagon receptor binding activity. Predicted to be involved in response to starvation. Predicted to be located in extracellular region. Is expressed in glucagon secreting cell. Human ortholog(s) of this gene implicated in Alzheimer's disease and prediabetes syndrome. Orthologous to human GCG (glucagon).
gcg Enables gastric inhibitory polypeptide receptor binding activity and identical protein binding activity. Predicted to be involved in several processes, including positive regulation of bicellular tight junction assembly; positive regulation of insulin secretion involved in cellular response to glucose stimulus; and protein kinase A signaling. Predicted to act upstream of or within negative regulation of execution phase of apoptosis; positive regulation of gluconeogenesis; and positive regulation of histone H3-K4 methylation. Predicted to be located in cytoplasm. Predicted to be active in extracellular space. Implicated in Alzheimer's disease and prediabetes syndrome.

NR:

description
PREDICTED: glucagon-2

GO: NA

KEGG:

id description
K05259 GCG; glucagon

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249390.1 True 622 mRNA 0.48 4 26065212 26067013

Neighbor

gene id symbol gene type direction distance location
LOC122352035 rbms1,LOC107675130,LOC107730583,LOC107663836,LOC107722911 coding downstream 145516 25862753 ~ 25919696 (-)
LOC122351834 LOC107572957,LOC107663596,LOC107573769,LOC107728255,LOC107661170,LOC108265697 coding downstream 602363 25459895 ~ 25462849 (-)
gpbar1 LOC107656509,LOC107564146,LOC107688960,LOC107739693,LOC107596586 coding downstream 1257431 24803623 ~ 24807781 (-)
zgc:92380 zgc:92380,LOC107656510,LOC107564128,LOC107688951,LOC107739632 coding downstream 1268158 24789506 ~ 24797054 (-)
LOC122351587 NA coding downstream 1278975 24784903 ~ 24786237 (-)
LOC122351282 fap,LOC107563829,LOC107722901,LOC107677917,LOC107561562 coding upstream 1225 26068238 ~ 26080787 (-)
ifih1 ifih1,LOC107722900,LOC107563828,LOC107730588,LOC107561563 coding upstream 15135 26082148 ~ 26104816 (-)
G73385 NA non-coding downstream 2380 26054867 ~ 26062832 (-)
G73379 slc4a10,LOC107722898,LOC107674766,LOC107730592 non-coding downstream 19799 26044164 ~ 26045413 (-)
G73308 NA non-coding downstream 99318 25945401 ~ 25965894 (-)
G73351 NA non-coding downstream 202800 25860328 ~ 25862412 (-)
G73350 NA non-coding downstream 218416 25834317 ~ 25846796 (-)
LOC122351758 LOC107663860,LOC107722919,LOC107561565,LOC107585695,LOC107675138 other downstream 211909 25794083 ~ 25853303 (-)
G73347 NA other downstream 272156 25790517 ~ 25793056 (-)
G73300 LOC107577510,LOC107663597,LOC107729051,LOC107728259,LOC107661178 other downstream 606470 25456414 ~ 25458742 (-)
G73301 NA other downstream 715572 25348778 ~ 25349640 (-)
G73201 NA other downstream 1034247 25027585 ~ 25030965 (-)
LOC122351579 LOC107563831,LOC107730593,LOC107677922,LOC107674758,LOC107722906 other upstream 39644 26106657 ~ 26187631 (-)
fign fign,LOC107730568,LOC107722902,LOC107677893,LOC107674765,LOC107600675 other upstream 205363 26272376 ~ 26331126 (-)

Expression


Co-expression Network