wdr75 (wdr75,LOC107660592,LOC107714378,LOC107728907,LOC107657531,LOC107602136,LOC107565028)


Basic Information

Item Value
gene id wdr75
gene name wdr75,LOC107660592,LOC107714378,LOC107728907,LOC107657531,LOC107602136,LOC107565028
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19750542 ~ 19766793 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249391.1
CTGGCCCGGCGAGAGACGCTTCAAAATGTTCACACGGAGTCCGGAGACGGCTGCGCGCTCCCGTTTCCTCTCGTGAATGGAGTCCCACGGGGCGCGAATGTCACAGATATCCAGCGAACATGACTGAACGGGTAAACAGTAGGTGGCGGTAAAGCATCTATCAATTGGTTTGCCAAACGCCAAAGAaaccaaagaagaagaaaaactgttGTCGCTGCCAGGCCGCACGGCGGCGCTGTGATCCGGTAGTTTGATTTAACTTCAGGCGAAGAAGAAACGCACCGCGGCCACATGTGATGTGAAGAGAAGCAGAAAAACATGGTGGAGAAGAGCGACATCCGCGTGGTTCGCTGCGGCGGCAGTAAAGTAAACTTTAGACCTTCGGTCATCTCCACTGACTCCAGGTTTGTGTTGTGCGCCTCTGGAGATTTGGTGAAGGTCTATAGCACACGCACAGAAGAGTGGCTCCATAGTCTACAGGGCCACACCAACCAAGTGACGGGCATCTCCTTGAATCCTGCCAATCACCTGCAGGTTTACTCTTGCTCAGTAGATGGCACTGTCAAATTGTGGGACTTCATTGATGGCATCCTTATCAAGacatttatcGTTGGATCTCCTTTGCTTGCAATATACTTGTCCGAGAAACACGAGGGAGTcctttttcttcatgtttccTTGGCTTCAGATTCAATCAATGAGTTTTTCCAGTTGGTTGCTGTACGTCTGCCCAAGTCAGCAGAGCAGGAGGTGCAGGCCGGAGAGATGTCTGCTGTTGTCACTCATATCAGCTCAAACCCCAACTGCACGGCCTTCGGTCGAGAGGGGGAATACATAGCGTTTGCCAGGAATCTCCAacttaatgtttatttcttcagGAAGCAGAAGACATACAATTTTTATCTAAAAGCCACAGATAAGAAAGGagccaaaaatgcattcacGTGCGTAGCCTGTCACCCGACAGACGACTGCATCGCCACTGGTCATGCAGATGGAAAGATCCGCCTCTGGAGAAACTTCATTCACAAAAAAGAGTACACGTATTCCACCCATCACTGGCATCACAATGCTGTGAATACTTTGTGTTTTACTCCCGAAGGCACTCATCTGCTGAGTGGAGGCATTGAGTCGGTGCTGATCCAGTGGCAGTATGGAGCAGGCAACAAAAAAGAGATCCTGCCCCGTCTTGGAGGATCCATATTACATATATCAGTATCATCTGATGGGCAGTTGTTTTGCACTTCTCATTTAGACAACAAGATCAAAATTATCGAGAGCAGCTTCAAAGTCTGTGGAGTAATTCAGGGTTTAGTCAAAGGAGATGGCGTTTTGACTGATCTAATGATTGACCCGCACAGTAAAGCTTTAGTGCTGAATGGGAAACCGGGTCATTTACAGTTCTACTCCCTGCTGCGTGACAAGCATCTCTATGATCTGGACATAGTGCAGCAAGAATATATTTATGAAGCGGGTCTGGATCAGTTTGAAGTGGTGAAGGCTGCTTTTGACATAAAAGGGTCCTGGCTTGCTACGGTGGAGGAAAGGGGACAAAAATCCTCTGATCTTGAGTTTTTCCTCAAACTGTGGGCTTTTGATGAAAGAACGCAAAGTTTCGTACTAAACACTGCCATCACTGCCGCCCACACGGATCGGATTATCTCCATGTGCTTCAGCTCTTCTGAGGAGACCACCGTGCTGGTGACCACAGCAGAGGATGGCCAGTTCAAAGCCTGGTGTCAGGGTGCTGACTCAGACATACAACCGGACCAGAACTTCTGGTCATGTGATTTTGTGGGGAGCTACCATAACCTAAAGCCCACAAACTGCTGCTTCTCTGCCGATAGCTCTCTCCTGGCGGTGAGCTTCCAAGAAGTCATTACCATATGGAGCCCAGACACCTGGGAGATGCTCACCACCCTCTGCCAACCACCTGGAGTAATAAGGGACCTTTGTTTCGGCCGGTTAAGCTGCTCCAAATACTTGCTTAGCACGACCACCAGCAACATGCTCTGCTGCTGGAATCTCCTCTCTTGTGCATTGGAGTGGAGCACATCTGTAGCAGTTTCCAAGCTTCAGCCAGACCCCTTGTCAGAAAATGTGGCCGCCTTTTCGTACCAGTCTAAACATACAGACTTGTTTGTTTTCAAACCGAGCAAGCCGTGGCCTATGTTCACACATAAGAATGTGTGTTCAGAGAAGGTACACCGTGCCGTCTTTGTTCCTCGAGAAGAGCCATTAAACAATTGTGATGACAGTTCTCAGTGGCTCAACAGATCTCAGCTGTACTTCCTCACCCAAAACATGGATTTATTTACCTTCAGCACAGCAACAGAGGAGGACAGAATGTTGTCTTCAAGTAaacggCTTGTCATTGATGACAACGTTGCTGTAACACCATTTTACCTGCTGTTGAGCAAACAAGGACAACAGCAGCAGAAACTCAACACACAGTCCCATCCAGCGGCCGACAAACCCAAACAGCCACAGGGCTCCGTTACCATCAAACAATTGTTACACACACCAGCTCATGTTCTACCTCCCGCGTCGGTCCTATGCTCAATGTTTGTCAATTCTCTCCTGATCTCCAACACCGGAGTCCAGCAAGACCCCCTCAGagagGAAATCGAATCTTCAGAGCAGGTAATGGACagtgagaaagaggaagaggagtcTGAGGAGGAAATGGAGGCATGTGATAGTCAGCAGGAATACAGAGCCCGAGGATCAGTGGATGAGGTGACGCCGAAGCTTTCTAAAGCCCAAGAGAGGGAACTGAAGAGGGTCAGAAAGACTGACTTTAGCTGGATAGCTGGTCTCGTCAACTCCAAACCGTGATGAAGCAATTTCACAAtcctgttaatgtttttttttattttttttaaatatatattcttccCAACTTGCTTCAGATCCAGACCAGTGGTTAGTTAGTAATTGTTTATTTGGACTGCAGAAACCCATTAGTGGTTTGATGATTCTTTTTGGGACAACAATGCTATTTAGTATAATGTTCATCCAGTTTGCATCCACAATAATTTATAAAGACGTTTTTGAACAATGTACTGTGATGTTGAATTTTTGTCagtatatttgtgcatttttataattaacacATGCGGATATATCTTGATCTtgcactgaaaaaagaaaaaaagaacttttgCTCTGTGCTCTATATACAGTTGAAGACAATTATTATCCccctattaaaaaaataaatataaatatatatatttgccaaGTA
>XM_043249392.1
CGGCGAGAGACGCTTCAAAATGTTCACACGGAGTCCGGAGACGGCTGCGCGCTCCCGTTTCCTCTCGTGAATGGAGTCCCACGGGGCGCGAATGTCACAGATATCCAGCGAACATGACTGAACGGGTAAACAGGTGGCGGTAAAGCATCTATCAATTGGTTTGCCAAACGCCAAAGAaaccaaagaagaagaaaaactgttGTCGCTGCCAGGCCGCACGGCGGCGCTGTGATCCGGTAGTTTGATTTAACTTCAGGCGAAGAAGAAACGCACCGCGGCCACATGTGATGTGAAGAGAAGCAGAAAAACATGGTGGAGAAGAGCGACATCCGCGTGGTTCGCTGCGGCGGCAGTAAAGTAAACTTTAGACCTTCGGTCATCTCCACTGACTCCAGGTTTGTGTTGTGCGCCTCTGGAGATTTGGTGAAGGTCTATAGCACACGCACAGAAGAGTGGCTCCATAGTCTACAGGGCCACACCAACCAAGTGACGGGCATCTCCTTGAATCCTGCCAATCACCTGCAGGTTTACTCTTGCTCAGTAGATGGCACTGTCAAATTGTGGGACTTCATTGATGGCATCCTTATCAAGacatttatcGTTGGATCTCCTTTGCTTGCAATATACTTGTCCGAGAAACACGAGGGAGTcctttttcttcatgtttccTTGGCTTCAGATTCAATCAATGAGTTTTTCCAGTTGGTTGCTGTACGTCTGCCCAAGTCAGCAGAGCAGGAGGTGCAGGCCGGAGAGATGTCTGCTGTTGTCACTCATATCAGCTCAAACCCCAACTGCACGGCCTTCGGTCGAGAGGGGGAATACATAGCGTTTGCCAGGAATCTCCAacttaatgtttatttcttcagGAAGCAGAAGACATACAATTTTTATCTAAAAGCCACAGATAAGAAAGGagccaaaaatgcattcacGTGCGTAGCCTGTCACCCGACAGACGACTGCATCGCCACTGGTCATGCAGATGGAAAGATCCGCCTCTGGAGAAACTTCATTCACAAAAAAGAGTACACGTATTCCACCCATCACTGGCATCACAATGCTGTGAATACTTTGTGTTTTACTCCCGAAGGCACTCATCTGCTGAGTGGAGGCATTGAGTCGGTGCTGATCCAGTGGCAGTATGGAGCAGGCAACAAAAAAGAGATCCTGCCCCGTCTTGGAGGATCCATATTACATATATCAGTATCATCTGATGGGCAGTTGTTTTGCACTTCTCATTTAGACAACAAGATCAAAATTATCGAGAGCAGCTTCAAAGTCTGTGGAGTAATTCAGGGTTTAGTCAAAGGAGATGGCGTTTTGACTGATCTAATGATTGACCCGCACAGTAAAGCTTTAGTGCTGAATGGGAAACCGGGTCATTTACAGTTCTACTCCCTGCTGCGTGACAAGCATCTCTATGATCTGGACATAGTGCAGCAAGAATATATTTATGAAGCGGGTCTGGATCAGTTTGAAGTGGTGAAGGCTGCTTTTGACATAAAAGGGTCCTGGCTTGCTACGGTGGAGGAAAGGGGACAAAAATCCTCTGATCTTGAGTTTTTCCTCAAACTGTGGGCTTTTGATGAAAGAACGCAAAGTTTCGTACTAAACACTGCCATCACTGCCGCCCACACGGATCGGATTATCTCCATGTGCTTCAGCTCTTCTGAGGAGACCACCGTGCTGGTGACCACAGCAGAGGATGGCCAGTTCAAAGCCTGGTGTCAGGGTGCTGACTCAGACATACAACCGGACCAGAACTTCTGGTCATGTGATTTTGTGGGGAGCTACCATAACCTAAAGCCCACAAACTGCTGCTTCTCTGCCGATAGCTCTCTCCTGGCGGTGAGCTTCCAAGAAGTCATTACCATATGGAGCCCAGACACCTGGGAGATGCTCACCACCCTCTGCCAACCACCTGGAGTAATAAGGGACCTTTGTTTCGGCCGGTTAAGCTGCTCCAAATACTTGCTTAGCACGACCACCAGCAACATGCTCTGCTGCTGGAATCTCCTCTCTTGTGCATTGGAGTGGAGCACATCTGTAGCAGTTTCCAAGCTTCAGCCAGACCCCTTGTCAGAAAATGTGGCCGCCTTTTCGTACCAGTCTAAACATACAGACTTGTTTGTTTTCAAACCGAGCAAGCCGTGGCCTATGTTCACACATAAGAATGTGTGTTCAGAGAAGGTACACCGTGCCGTCTTTGTTCCTCGAGAAGAGCCATTAAACAATTGTGATGACAGTTCTCAGTGGCTCAACAGATCTCAGCTGTACTTCCTCACCCAAAACATGGATTTATTTACCTTCAGCACAGCAACAGAGGAGGACAGAATGTTGTCTTCAAGTAaacggCTTGTCATTGATGACAACGTTGCTGTAACACCATTTTACCTGCTGTTGAGCAAACAAGGACAACAGCAGCAGAAACTCAACACACAGTCCCATCCAGCGGCCGACAAACCCAAACAGCCACAGGGCTCCGTTACCATCAAACAATTGTTACACACACCAGCTCATGTTCTACCTCCCGCGTCGGTCCTATGCTCAATGTTTGTCAATTCTCTCCTGATCTCCAACACCGGAGTCCAGCAAGACCCCCTCAGagagGAAATCGAATCTTCAGAGCAGGTAATGGACagtgagaaagaggaagaggagtcTGAGGAGGAAATGGAGGCATGTGATAGTCAGCAGGAATACAGAGCCCGAGGATCAGTGGATGAGGTGACGCCGAAGCTTTCTAAAGCCCAAGAGAGGGAACTGAAGAGGGTCAGAAAGACTGACTTTAGCTGGATAGCTGGTCTCGTCAACTCCAAACCGTGATGAAGCAATTTCACAAtcctgttaatgtttttttttattttttttaaatatatattcttccCAACTTGCTTCAGATCCAGACCAGTGGTTAGTTAGTAATTGTTTATTTGGACTGCAGAAACCCATTAGTGGTTTGATGATTCTTTTTGGGACAACAATGCTATTTAGTATAATGTTCATCCAGTTTGCATCCACAATAATTTATAAAGACGTTTTTGAACAATGTACTGTGATGTTGAATTTTTGTCagtatatttgtgcatttttataattaacacATGCGGATATATCTTGATCTtgcactgaaaaaagaaaaaaagaacttttgCTCTGTGCTCTATATACAGTTGAAGACAATTATTATCCccctattaaaaaaataaatataaatatatatatttgccaaGTA

Function

symbol description
wdr75 Predicted to act upstream of or within rRNA processing. Predicted to be located in nucleolus. Is expressed in several structures, including alar plate midbrain region; digestive system; immature eye; nervous system; and segmental plate. Orthologous to human WDR75 (WD repeat domain 75).

NR:

description
PREDICTED: WD repeat-containing protein 75

GO:

id name namespace
GO:0005730 nucleolus cellular_component

KEGG:

id description
K14552 NAN1, UTP17, WDR75; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249391.1 True 3247 mRNA 0.46 22 19750542 19766793
XM_043249392.1 False 3238 mRNA 0.46 22 19750542 19766787

Neighbor

gene id symbol gene type direction distance location
LOC122352057 NA coding downstream 13331 19736033 ~ 19737211 (-)
asnsd1 asnsd1,LOC107728934,LOC107660596,LOC107714374 coding downstream 14421 19733900 ~ 19736121 (-)
adat3 LOC107728938,LOC107714375,LOC107681677,LOC107565014,LOC107660599,LOC107602133 coding downstream 34099 19713485 ~ 19716443 (-)
pms1 pms1,LOC107602147,LOC107728929,LOC107660601,LOC107714373,LOC107565013 coding downstream 41572 19684890 ~ 19708970 (-)
pofut2 LOC107741944,LOC107660604,LOC107714363,LOC107657505,LOC107565035 coding downstream 107609 19636451 ~ 19642933 (-)
obsl1b obsl1b,obsl1,LOC107660652,LOC107602158,LOC107657519,LOC107728922,LOC107714352,LOC107584169,LOC108423904 coding upstream 230682 19997475 ~ 20029805 (-)
calcrla calcrla,LOC107728927,LOC107657513,LOC107602163,LOC107714396 coding upstream 482195 20248988 ~ 20270532 (-)
tfpia LOC107602164,LOC107728931,LOC107714394,LOC107660650,LOC107584163 coding upstream 504427 20271220 ~ 20295378 (-)
LOC122351553 fkbp7,LOC107562709,LOC107717008,LOC107657501,LOC107584168,LOC107714366,LOC107698996 coding upstream 634591 20401384 ~ 20403699 (-)
LOC122351723 ttn,ttnb,LOC107698997,LOC107714355,LOC107601612,LOC107716993,LOC107657493 coding upstream 644602 20411395 ~ 20417109 (-)
G71645 NA non-coding downstream 38358 19709384 ~ 19712184 (-)
LOC122351289 NA non-coding downstream 69143 19674731 ~ 19681399 (-)
G71667 cunh2orf88,LOC107728910,LOC107657540,LOC107714370,LOC798500,LOC103027948 non-coding downstream 79378 19667000 ~ 19671164 (-)
LOC122351304 NA non-coding downstream 224952 19519740 ~ 19525590 (-)
LOC122351387 NA non-coding downstream 242457 19496912 ~ 19508085 (-)
G71692 NA non-coding upstream 24454 19791247 ~ 19791560 (-)
G71727 NA non-coding upstream 120382 19887175 ~ 19941547 (-)
G71732 NA non-coding upstream 149406 19916199 ~ 19922691 (-)
G71912 LOC107602164,LOC107660650,LOC107728931 non-coding upstream 396330 20163123 ~ 20630423 (-)
G71919 LOC107728915 non-coding upstream 448627 20215420 ~ 20218047 (-)
ankar ankar,LOC107728908,LOC107660654 other downstream 18748 19719942 ~ 19731794 (-)
LOC122352185 NA other downstream 1180660 18569755 ~ 18569882 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other downstream 1384275 18251236 ~ 18366267 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other downstream 2228982 17364187 ~ 17521560 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other downstream 2495051 17235872 ~ 17255491 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other upstream 29459 19796252 ~ 19829475 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other upstream 67127 19833920 ~ 19852625 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other upstream 114757 19881550 ~ 19893315 (-)
G71938 nab1,LOC107565022 other upstream 722371 20489164 ~ 20503890 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other upstream 1942495 21709288 ~ 21726820 (-)

Expression


Co-expression Network