stat4 (stat4,LOC107660593,LOC107728930,LOC107714380,LOC107657497)


Basic Information

Item Value
gene id stat4
gene name stat4,LOC107660593,LOC107728930,LOC107714380,LOC107657497
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19766663 ~ 19778896 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249393.1
AACTTCGTCTTGGTTAAACGCgttgctctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagggttagcAGGTGCGTTGTGTCGGTTTCTCTGGAGCGTCGTTCTCGTGAGAGCACCACTATGAGTCAATGGAAACAAATCCAGCAACTGGATATTAAATTCCTCGAACAAGtggattatttttatgatgacAACTTTCCAATGGAGCTGAGGCAGGTGCTGGCCAGCTGGATTGAAAGCCAGGActgGGAAACGGCTTCAAACCACGAATCTATTGCCACGGTACTCTTCAATAATTTCCTCATTCAGCTGGAGAGGCAGTGTTCTCAGGAGCAGAACTTTCTTCACAGACACAACCTAAAGAGAATATTTCATCAGATACAGGTAAAATATAAGGCGAATCCTCTGCACATGGTTGCTGTAATCTGTAACTGCCTGAGGGAAGAAAGACGCATCTTATCCACAGCCAGCATGCAGGAACAGGGACCGCTGGAGAAGTCAATGCAAAACTCAGCCACAGTGGAGAAGCTCAAAGTTCTTGACAACAAAGTGGCAGTCATAAGAAGCAGCGTTCAGATGCTGGACCAGGCTGTGAAGTATCTTGAGGACATGCAGGACGATTTTGACTTTCGCTACAAAACACTCCAGCTTCGAGATCCAGTTGACAGAAACTCTTTAACCATGAAGCAAGAAGTCACTACACTTCAGGAAATACTGAATCGCCTGGATTTCAAAAGAAAGGAGATTTTGTCAAAGATTGCAGATGTTATAAAGGAAATTGATACCCTGATCTCCTCTCAGCTTAACCCTGAGCTTAAGGAATGGAAACGGAGGCAACAGATCGCCTGCATCGGAGGACCGGTTCTGATAGGACTGGACCAGCTCCAAAACTGGTTTACCCTGACAGCCCAGAGTCTTTTCCAGATTAAGAGACAGCTGGACAAACTGGGTGAACTCATCCTGAAAGTCACTTACGAGAGTGATCCAATCCCTCTCCAGAGACCTCAGATGGAGGAGCAAGTCAAATACCTCATCTACCACCTCATTAAAAGCTCCTTTGTGGTGGAGAAGCAGCCATGCATGCCTACACACCCTCAGAAACCTCTAATCATCAAAACACAGGTGCAGTTTACCACCAAGGTCAGattaCTGGTTAAGTTACCTGAGGTGGATTATCAACTCAAAGTCAAGACAACATTTGATAAAGACCTTCCACCAGGCAAAGTAAACAGGCAGTTCTTCATCCTCACCAACAACACCAAAGTGATGGATGTTGAGGAGTCGACTGGATGTCTTTCTGTAGAGTTCAGGCATCTGcagctgaaagagagaaagtgtcCTACCGGAGGAAAAGGAAATGAGGGTCCCCTGTCAGTAACAGAGGAGTTACACTCTCTCAATTTTGAGGCCATGCTGGTGTTGCAGGGCCTGGATATTGATCTTGAGACTTGCTCCCTGCCACTGGTGGTCATCTCCAATGTCAGTCAGCTCCCAGGAGGTTGGGCCTCTGTGATGTGGTACAATCTGCTAACTGATGACCCCAAGAACCTTGGATTCTTCAGTAACCCCTTGCGGGCCAGTTGGAGTCAACTCTCAGAGGTCCTCAGCTGGCAGTTCTCAAGTTTTGCAGGACGAGGACTCAACAAAGAACAACTTAACATGCTGGGAGATAAACTTCTAGGTCAACACGCTTCTTATAATGACTGCCAAGTTTCTTGGTCCAAGTTCTGGAAgGAAAACATTCCTGGCAAATCATTTAGTTTTTGGCTGTGGCTGGATTCGATCCTGGACCTTATCAAGAAGCATTTACTTCCTGTTTGGATTGATGGCTACATAATGGGTTTTGTGAGTAAAGAGATGGAACGCGCCTTACTGAAGGAGAAGGAGCCAGGGACTTTCCTGCTACGCTTTAGTGAAAGTCACCTCGGAGGAATCACCTTCACCTGGGTTGAGCAGGATGAAAATGGAGACCCAAAGTTCATCTCTGTAGAGCCGTACACAAAAAACCGTCTCAACGCCTTGCCCATTGCTGATATAATACGGGACTATAAGGTCATTGCAGATGGTGTCGTCCCAGAAAATCCTCTAAAGTTCCTTTATCCTGATATTCCGAAGGATGAGGCTTTTGGGAAACATTACAACAGCCAGCAAAACAAAGTTTGTCCTTACATTCAGACACAGTTAGTTCCAATTTCCCATCGGAATGGTCCAGTCCAAAATGCGTGTTCCTCTCCCGAACCCCCCATGTCTCCAGGAATGTTTGAAATTATCACCCAGCACCTCAGCCCCTTTGAGTTTGAAAGCGCCATGAGCTCACCCTAGAAAGTACAACGACCACATTTCATTTGGATCTAAGATTATGGACGGGTTCAAATATTTTCATCTCTTTATTTTGGCTTCGttagctgttttttgtttacttttctgGCTGTCTGCCACTATAATCCGTCATTCCCTATTTTCATTTGCCGAAAGATTGTATATTTCTAACATTATAACAGTTTATCTACAATAAACGAGAGTACAATATCACTGGTCTCATCTACCTGTAAAATTCAGATTTTGCCAAAATCATAATCTGCCTTAATTGCGATTGccattttcatgtttatgtatatattatgagaagcattttttcaaataaagaatTTTATGGTTGA
>XM_043249394.1
CCGTTCAGTCATGTTCGCTGGATATCTGTGACATTCGCGCCCCGTGGGACTCCATTCACGAGAGGAAACGGGAGCGCGCAGCCGTCTCCGGACTCCGTGTGAACATTTTGAAGCGTCTCTCGCCGGGCCAGCACCACTATGAGTCAATGGAAACAAATCCAGCAACTGGATATTAAATTCCTCGAACAAGtggattatttttatgatgacAACTTTCCAATGGAGCTGAGGCAGGTGCTGGCCAGCTGGATTGAAAGCCAGGActgGGAAACGGCTTCAAACCACGAATCTATTGCCACGGTACTCTTCAATAATTTCCTCATTCAGCTGGAGAGGCAGTGTTCTCAGGAGCAGAACTTTCTTCACAGACACAACCTAAAGAGAATATTTCATCAGATACAGGTAAAATATAAGGCGAATCCTCTGCACATGGTTGCTGTAATCTGTAACTGCCTGAGGGAAGAAAGACGCATCTTATCCACAGCCAGCATGCAGGAACAGGGACCGCTGGAGAAGTCAATGCAAAACTCAGCCACAGTGGAGAAGCTCAAAGTTCTTGACAACAAAGTGGCAGTCATAAGAAGCAGCGTTCAGATGCTGGACCAGGCTGTGAAGTATCTTGAGGACATGCAGGACGATTTTGACTTTCGCTACAAAACACTCCAGCTTCGAGATCCAGTTGACAGAAACTCTTTAACCATGAAGCAAGAAGTCACTACACTTCAGGAAATACTGAATCGCCTGGATTTCAAAAGAAAGGAGATTTTGTCAAAGATTGCAGATGTTATAAAGGAAATTGATACCCTGATCTCCTCTCAGCTTAACCCTGAGCTTAAGGAATGGAAACGGAGGCAACAGATCGCCTGCATCGGAGGACCGGTTCTGATAGGACTGGACCAGCTCCAAAACTGGTTTACCCTGACAGCCCAGAGTCTTTTCCAGATTAAGAGACAGCTGGACAAACTGGGTGAACTCATCCTGAAAGTCACTTACGAGAGTGATCCAATCCCTCTCCAGAGACCTCAGATGGAGGAGCAAGTCAAATACCTCATCTACCACCTCATTAAAAGCTCCTTTGTGGTGGAGAAGCAGCCATGCATGCCTACACACCCTCAGAAACCTCTAATCATCAAAACACAGGTGCAGTTTACCACCAAGGTCAGattaCTGGTTAAGTTACCTGAGGTGGATTATCAACTCAAAGTCAAGACAACATTTGATAAAGACCTTCCACCAGGCAAAGTAAACAGGCAGTTCTTCATCCTCACCAACAACACCAAAGTGATGGATGTTGAGGAGTCGACTGGATGTCTTTCTGTAGAGTTCAGGCATCTGcagctgaaagagagaaagtgtcCTACCGGAGGAAAAGGAAATGAGGGTCCCCTGTCAGTAACAGAGGAGTTACACTCTCTCAATTTTGAGGCCATGCTGGTGTTGCAGGGCCTGGATATTGATCTTGAGACTTGCTCCCTGCCACTGGTGGTCATCTCCAATGTCAGTCAGCTCCCAGGAGGTTGGGCCTCTGTGATGTGGTACAATCTGCTAACTGATGACCCCAAGAACCTTGGATTCTTCAGTAACCCCTTGCGGGCCAGTTGGAGTCAACTCTCAGAGGTCCTCAGCTGGCAGTTCTCAAGTTTTGCAGGACGAGGACTCAACAAAGAACAACTTAACATGCTGGGAGATAAACTTCTAGGTCAACACGCTTCTTATAATGACTGCCAAGTTTCTTGGTCCAAGTTCTGGAAgGAAAACATTCCTGGCAAATCATTTAGTTTTTGGCTGTGGCTGGATTCGATCCTGGACCTTATCAAGAAGCATTTACTTCCTGTTTGGATTGATGGCTACATAATGGGTTTTGTGAGTAAAGAGATGGAACGCGCCTTACTGAAGGAGAAGGAGCCAGGGACTTTCCTGCTACGCTTTAGTGAAAGTCACCTCGGAGGAATCACCTTCACCTGGGTTGAGCAGGATGAAAATGGAGACCCAAAGTTCATCTCTGTAGAGCCGTACACAAAAAACCGTCTCAACGCCTTGCCCATTGCTGATATAATACGGGACTATAAGGTCATTGCAGATGGTGTCGTCCCAGAAAATCCTCTAAAGTTCCTTTATCCTGATATTCCGAAGGATGAGGCTTTTGGGAAACATTACAACAGCCAGCAAAACAAAGTTTGTCCTTACATTCAGACACAGTTAGTTCCAATTTCCCATCGGAATGGTCCAGTCCAAAATGCGTGTTCCTCTCCCGAACCCCCCATGTCTCCAGGAATGTTTGAAATTATCACCCAGCACCTCAGCCCCTTTGAGTTTGAAAGCGCCATGAGCTCACCCTAGAAAGTACAACGACCACATTTCATTTGGATCTAAGATTATGGACGGGTTCAAATATTTTCATCTCTTTATTTTGGCTTCGttagctgttttttgtttacttttctgGCTGTCTGCCACTATAATCCGTCATTCCCTATTTTCATTTGCCGAAAGATTGTATATTTCTAACATTATAACAGTTTATCTACAATAAACGAGAGTACAATATCACTGGTCTCATCTACCTGTAAAATTCAGATTTTGCCAAAATCATAATCTGCCTTAATTGCGATTGccattttcatgtttatgtatatattatgagaagcattttttcaaataaagaatTTTATGGTTGA
>XM_043249395.1
AACTTCGTCTTGGTTAAACGCgttgctctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagggttagcAGGTGCGTTGTGTCGGTTTCTCTGGAGCGTCGTTCTCGTGAGAGCACCACTATGAGTCAATGGAAACAAATCCAGCAACTGGATATTAAATTCCTCGAACAAGtggattatttttatgatgacAACTTTCCAATGGAGCTGAGGCAGGTGCTGGCCAGCTGGATTGAAAGCCAGGActgGGAAACGGCTTCAAACCACGAATCTATTGCCACGGTACTCTTCAATAATTTCCTCATTCAGCTGGAGAGGCAGTGTTCTCAGGAGCAGAACTTTCTTCACAGACACAACCTAAAGAGAATATTTCATCAGATACAGGTAAAATATAAGGCGAATCCTCTGCACATGGTTGCTGTAATCTGTAACTGCCTGAGGGAAGAAAGACGCATCTTATCCACAGCCAGCATGCAGGAACAGGGACCGCTGGAGAAGTCAATGCAAAACTCAGCCACAGTGGAGAAGCTCAAAGTTCTTGACAACAAAGTGGCAGTCATAAGAAGCAGCGTTCAGATGCTGGACCAGGCTGTGAAGTATCTTGAGGACATGCAGGACGATTTTGACTTTCGCTACAAAACACTCCAGCTTCGAGATCCAGTTGACAGAAACTCTTTAACCATGAAGCAAGAAGTCACTACACTTCAGGAAATACTGAATCGCCTGGATTTCAAAAGAAAGGAGATTTTGTCAAAGATTGCAGATGTTATAAAGGAAATTGATACCCTGATCTCCTCTCAGCTTAACCCTGAGCTTAAGGAATGGAAACGGAGGCAACAGATCGCCTGCATCGGAGGACCGGTTCTGATAGGACTGGACCAGCTCCAAAACTGGTTTACCCTGACAGCCCAGAGTCTTTTCCAGATTAAGAGACAGCTGGACAAACTGGGTGAACTCATCCTGAAAGTCACTTACGAGAGTGATCCAATCCCTCTCCAGAGACCTCAGATGGAGGAGCAAGTCAAATACCTCATCTACCACCTCATTAAAAGCTCCTTTGTGGTGGAGAAGCAGCCATGCATGCCTACACACCCTCAGAAACCTCTAATCATCAAAACACAGGTGCAGTTTACCACCAAGGTCAGattaCTGGTTAAGTTACCTGAGGTGGATTATCAACTCAAAGTCAAGACAACATTTGATAAAGACCTTCCACCAGGCAAAGTAAACAGGCAGTTCTTCATCCTCACCAACAACACCAAAGTGATGGATGTTGAGGAGTCGACTGGATGTCTTTCTGTAGAGTTCAGGCATCTGctgaaagagagaaagtgtcCTACCGGAGGAAAAGGAAATGAGGGTCCCCTGTCAGTAACAGAGGAGTTACACTCTCTCAATTTTGAGGCCATGCTGGTGTTGCAGGGCCTGGATATTGATCTTGAGACTTGCTCCCTGCCACTGGTGGTCATCTCCAATGTCAGTCAGCTCCCAGGAGGTTGGGCCTCTGTGATGTGGTACAATCTGCTAACTGATGACCCCAAGAACCTTGGATTCTTCAGTAACCCCTTGCGGGCCAGTTGGAGTCAACTCTCAGAGGTCCTCAGCTGGCAGTTCTCAAGTTTTGCAGGACGAGGACTCAACAAAGAACAACTTAACATGCTGGGAGATAAACTTCTAGGTCAACACGCTTCTTATAATGACTGCCAAGTTTCTTGGTCCAAGTTCTGGAAgGAAAACATTCCTGGCAAATCATTTAGTTTTTGGCTGTGGCTGGATTCGATCCTGGACCTTATCAAGAAGCATTTACTTCCTGTTTGGATTGATGGCTACATAATGGGTTTTGTGAGTAAAGAGATGGAACGCGCCTTACTGAAGGAGAAGGAGCCAGGGACTTTCCTGCTACGCTTTAGTGAAAGTCACCTCGGAGGAATCACCTTCACCTGGGTTGAGCAGGATGAAAATGGAGACCCAAAGTTCATCTCTGTAGAGCCGTACACAAAAAACCGTCTCAACGCCTTGCCCATTGCTGATATAATACGGGACTATAAGGTCATTGCAGATGGTGTCGTCCCAGAAAATCCTCTAAAGTTCCTTTATCCTGATATTCCGAAGGATGAGGCTTTTGGGAAACATTACAACAGCCAGCAAAACAAAGTTTGTCCTTACATTCAGACACAGTTAGTTCCAATTTCCCATCGGAATGGTCCAGTCCAAAATGCGTGTTCCTCTCCCGAACCCCCCATGTCTCCAGGAATGTTTGAAATTATCACCCAGCACCTCAGCCCCTTTGAGTTTGAAAGCGCCATGAGCTCACCCTAGAAAGTACAACGACCACATTTCATTTGGATCTAAGATTATGGACGGGTTCAAATATTTTCATCTCTTTATTTTGGCTTCGttagctgttttttgtttacttttctgGCTGTCTGCCACTATAATCCGTCATTCCCTATTTTCATTTGCCGAAAGATTGTATATTTCTAACATTATAACAGTTTATCTACAATAAACGAGAGTACAATATCACTGGTCTCATCTACCTGTAAAATTCAGATTTTGCCAAAATCATAATCTGCCTTAATTGCGATTGccattttcatgtttatgtatatattatgagaagcattttttcaaataaagaatTTTATGGTTGA

Function

symbol description
stat4 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within vasculogenesis. Predicted to be located in cytoplasm and nucleus. Is expressed in anterior lateral plate mesoderm and pharyngeal arch. Human ortholog(s) of this gene implicated in several diseases, including IgA glomerulonephritis; autoimmune disease (multiple); dermatomyositis; genital herpes; and systemic scleroderma (multiple). Orthologous to human STAT4 (signal transducer and activator of transcription 4).

NR:

description
signal transducer and activator of transcription 4 isoform X2

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0007165 signal transduction biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K11222 STAT4; signal transducer and activator of transcription 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249393.1 False 2663 mRNA 0.44 24 19766833 19778896
XM_043249394.1 True 2678 mRNA 0.45 24 19766663 19778896
XM_043249395.1 False 2660 mRNA 0.44 24 19766833 19778896

Neighbor

gene id symbol gene type direction distance location
slc40a1 slc40a1,LOC107660595,LOC107602151 coding upstream 18352 19741640 ~ 19748311 (+)
zgc:136439 zgc:136439,LOC107660597,LOC107602150,LOC107728935 coding upstream 32692 19732355 ~ 19733971 (+)
osgepl1 osgepl1,LOC107660598 coding upstream 46228 19717262 ~ 19720435 (+)
mstnb LOC107728928,LOC107602146,LOC107660602,LOC107657539 coding upstream 89827 19673260 ~ 19676836 (+)
hibch hibch,LOC107660603,LOC107714371,LOC107741945 coding upstream 100050 19643049 ~ 19666613 (+)
stat1b stat1,LOC107728932,LOC107660594,LOC107602152,LOC107714382,LOC107565020 coding downstream 2767 19781663 ~ 19790963 (+)
LOC122351701 NA coding downstream 13315 19792211 ~ 19793933 (+)
nemp2 LOC107660589,LOC107728924,LOC107714385,LOC107602139,LOC107565024,LOC107657526 coding downstream 93525 19872421 ~ 19881143 (+)
spegb speg,LOC107602155,LOC107714387,LOC107728905,LOC107657495 coding downstream 119928 19898824 ~ 19972821 (+)
ctdsp1 ctdsp1,LOC107714388,LOC107602156,LOC107660585,LOC107657521,LOC107584167,LOC108423903,LOC103359966 coding downstream 196580 19975476 ~ 19996549 (+)
G71636 NA non-coding upstream 1445 19764954 ~ 19765218 (+)
G71633 NA non-coding upstream 8869 19757305 ~ 19757794 (+)
G71632 NA non-coding upstream 9558 19756560 ~ 19757105 (+)
G71631 LOC107660592,LOC107728907 non-coding upstream 10485 19755866 ~ 19756178 (+)
G71629 NA non-coding upstream 11570 19754524 ~ 19755093 (+)
G71705 LOC107660652,LOC107602158,LOC107728922 non-coding downstream 221900 20000796 ~ 20003786 (+)
G71783 NA non-coding downstream 492112 20271008 ~ 20602247 (+)
G71813 ttn,ttnb,LOC107716993,LOC107714355,LOC107601612,LOC107657493,LOC107698997 non-coding downstream 555190 20334086 ~ 21173177 (+)
LOC122351566 NA non-coding downstream 614783 20393679 ~ 20395192 (+)
G71821 ttnb,ttn,LOC107716993,LOC107657493,LOC107601612 non-coding downstream 642259 20421155 ~ 20431311 (+)
ormdl1 ormdl1,LOC107602148 other upstream 52259 19709364 ~ 19714404 (+)
G71585 NA other upstream 145170 19621284 ~ 19621493 (+)
vwc2l vwc2l,LOC107660607,LOC107657506,LOC107714362,LOC106586444 other upstream 222986 19512854 ~ 19543677 (+)
cps1 cps1,LOC107660611,LOC107741925 other upstream 835201 18896602 ~ 18931462 (+)
lmln lmln,LOC107741941,LOC107555912,LOC107673747,LOC107596075,LOC107714369,LOC107660656 other upstream 1077121 18682672 ~ 18689542 (+)
si:dkey-10c21.1 NA other downstream 434499 20213395 ~ 20218120 (+)
gulp1a gulp1,gulp1a,LOC106581930,LOC107584160,LOC107717010,LOC107657514,LOC107562715,LOC107699007,LOC107714392 other downstream 569931 20348827 ~ 20362462 (+)
G71825 ttnb,LOC107657493,LOC107714355,LOC107601612,LOC107716993,LOC107698997 other downstream 646105 20425001 ~ 20750851 (+)
G71835 ttnb,LOC107716993,LOC107698997,LOC107601612,LOC107714355,LOC107657493 other downstream 658262 20437158 ~ 20764175 (+)
G71842 LOC107728921,LOC107660591,LOC107602138 other downstream 780746 20559642 ~ 20569276 (+)

Expression


Co-expression Network