slc15a2 (slc15a2,LOC107722867,LOC107660645,LOC107597582)


Basic Information

Item Value
gene id slc15a2
gene name slc15a2,LOC107722867,LOC107660645,LOC107597582
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 18185732 ~ 18196303 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249403.1
ACAATACTACAGCCTAACCAACGCGACTGCCTCGATATAACTCGACGAAAGACGCCAAGCTTTCCCTGCCAAACGCTTCCGTTGCATTTGCAGCGTTCGTTTACATATTAACGTTTTGGAGCGTGTAGCTCCCGCATAAACCGCATAATCTGATGCATGTGTCGGGTCTCATGTCGCTCATCGACCCGCCCGGTTCGGAGTTAAGGATTCTTTGTCACGAAGTAGAACATTAACCCAAGAAGGTTAAACGGCTTTAACAGCAGCGTGAAGCGGATGAGTTTTCACTCTCTGTGGAGGGACGGGCTTGGACGCGTGCTCAGGAATCCACTAGATGCTGAGTGTCCAGATACACGCTTGGATCAATTGAAGACATGGGGGAAAAGAAGGACAAAAATGTTGATGCAGAAGACCATGGAAAAGGACCGCGCTCACCGAAATTATGTGGCACTAACTACCCAGTTAGCATTGCCTTCATTGTGGTCAACGAGTTCTGTGAAAGATTCTCTTACTATGGAATGAAAGcgGTGCTCACCCTTTACTTCATCCACTACCTACACTGGGACAAGAATCTCTCTACAGCCGTGTACCACGCTTTCTCAAGCCTGTGTTACTTCACACCGCTTCTAGGCGCCCTGATAGCCGACTCGTGGTTGGGGAAGTTTAAaactatcatctatctgtctatagtCTATGTGATTGGTCATGTGGTTAAGTCTGTCGGTGCCATACCTGATGTGGGGGACAGCACTGTTCATGTGGTTTTGTCGATGCTTGGTCTGGTCCTCATAGCTTTTGGGACAGGAGGGATTAAACCATGTGTTGCAGCATTTGGTGGCGACCAGTTTGATGAAGAGCATACAGAAGAGAGGAGAAAATTCTTCTCCATCTTTTACATGTCAATCAATGCTGGAAGTGTCCTGTCCACCGTCATCACACCAATACTAAGAGGCGACGTGAAGTGCTTTGGAGGAGATTGCTACGCCCTGGCCTTTGGAGTTCCTGCAGCTTTAATGGTCATTGCCTTAGTGGTGTTTATCGCTGGGAGTGGATTATATAAGAAAAGTCCTCCAGAAGGAAATGTCCTGGTGCGTGTCTGCAAATGTATTGGGTTTGCTATACGCAATCGATGGAAGAATTCCAAGAAGAGCCCAAAAAGGAGTCACTGGCTTGATTGGGCTGAAGAGAAGTACTCTaaGCGGCTCATTCAGGAAATTAAAATGGTGTTCAGGGTGCTGGTTCTCTATATTCCATTGCCCATGTTTTGGGCTCTCTTTGACCAGCAGGGTTCACGCTGGACTCTGCAGGCCACTCGAATGAACATGGATTTTgGTGGAGGCTTCATATTAAAGCCTGATCAAATGCAGATGCTGAATGCTTTGCTGATTCTGGTGTTCATTCCGATCTTCGACATGGGCATATACCCGCTGATAGGGCTGTGTCGGATTAAACTCACtCCACTAAGAAAGATGGCTGCAGGCATGATCCTCGCTGCACTTGCATTCTGTGCCGCAACTCTCGTAGAAATCAACGTTATCAAAACCGTTGTGGAGCCACCTCCTGCCAAAGAAAGTCTTGTTCAGGTTTACAATCTTATGGAATCGGAGGTCACTGTGCGGTTTCCAGGACACGCTATCCTCTCAGATCCACTTACATCATATGAGGATCCTTCGGGATACACAAGCCTTCCACTCACTGGCGAATCCCAGCTCTACACGGTTACTGTCAGTCACAAGGGGACCGAACACCAGTGCGGACTCACCTTCACAGAGCGGACTGCTTACAGTCTCTTCCTGTACACTGCACCAACCGGTGACGCCGTATGCAAACTGGTGAAAGATCACATCAGCAAATCTGAGACTGGGGCTGCTTATCTAAGGTTTATCAACACTCACACAGAGAATATCAACATAACCGTTGGCACTGAGGAGTTTTATGCAGCTGCTAATTATGGgatttctcaaaatattagtGTGCCTAGGGGAGaACACAACGGTGTTGTTTGCGAAACAAACTCGGACCAATATCAAATCGACCTGGGACTTCTTGATTTCGGTGCCTTCTATACTGTCATACTCTCAAAGGAAAGTGATGGGCTAGCATTCAAAAAGATGGAGGATATCCAGGCCAACGATATTCACATTGCATGGCAGGTTCCTCAGTATGTTTTCCTCACTGCTGGAGAAGTCATGTTCTCCATCACTGGTTTGGAGTTCTCCTACTCGCAGGCGCCGGCAAGCATGAAGTCTGTTCTCCAGGCGGGATGGCTTATGACTGTGGCATTTGGAAATGTCATTGTACTGATTGTGGCAGAGGGAGCTGGGATGGAACAGTGGACAGAGTTCCTACTTTTTGCTGGCCTTTTGGTGGCTGTCAGCATCATCTTCTCCATCATGGCCTATTTCTACACTTACGTGGATCCGGACCAGCTTGACAAGATTTTCAGAGAGGACCCAGATGATGAGAAGATGGAAAGTTCTGAAAGTGCTTTTGGGTTTGTGAGCCAAATGAACAGGAATGAGATGAGGTCCGAAGGGAACCACGAAGGAGACAGACTTCGAAGTTTTTAACAGTCCGCTGGAGTCGCGTTTTCCCAGCTCTGCTCTGGGCTGGTCTGCAAGCGAGGCCATGCCTTCAGTATCATCTCTCCTCTTCTCCAAACAAGCCTTTACTGCCAAGTTCAAATACTGCATGTTTTCATCGTGTGAAG

Function

symbol description
slc15a2 Enables dipeptide transmembrane transporter activity. Acts upstream of or within response to yeast. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including gill; gut; kidney; nervous system; and otic vesicle. Orthologous to human SLC15A2 (solute carrier family 15 member 2).

NR:

description
PREDICTED: solute carrier family 15 member 2-like

GO:

id name namespace
GO:0001878 response to yeast biological_process
GO:0042938 dipeptide transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K14637 SLC15A2, PEPT2; solute carrier family 15 (oligopeptide transporter), member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249403.1 True 2707 mRNA 0.48 24 18185732 18196303

Neighbor

gene id symbol gene type direction distance location
gli2a gli2a,LOC107722873,LOC107660646,LOC107661135,LOC107714335,LOC107596061 coding upstream 6507 18113553 ~ 18179225 (+)
inhbb LOC107597480,LOC107722876,LOC107660647 coding upstream 128988 18049032 ~ 18056744 (+)
si:dkey-3d4.3 LOC107597481,LOC107660648,LOC107596097,LOC107661133,LOC107714494,LOC107597559 coding upstream 138782 18040897 ~ 18046950 (+)
atp1a1b atp1a1b,atp1a1,LOC107656784,LOC107756749,LOC107569141 coding upstream 513215 17662488 ~ 17672517 (+)
mab21l3 LOC107597583,LOC107673652,LOC107756750,LOC107656782,LOC107569145 coding upstream 529645 17652270 ~ 17656087 (+)
slc49a4 dirc2,LOC107597477,LOC107596062 coding downstream 9345 18205648 ~ 18240718 (+)
pdia5 pdia5,LOC107661141,LOC107596065,LOC107660642,LOC107555900 coding downstream 172440 18368743 ~ 18412641 (+)
sec22a sec22a,LOC107722877,LOC107555913,LOC107660641,LOC107596098,LOC107661143,LOC107714480 coding downstream 219880 18416183 ~ 18425068 (+)
stam2 stam2,LOC107661142,LOC107596068,LOC107555917,LOC107714296,LOC107660637,LOC107741902 coding downstream 303999 18500302 ~ 18510026 (+)
cacnb4a cacnb4,cacnb4a,LOC107660636,LOC107741900,LOC108434427 coding downstream 321909 18518212 ~ 18537051 (+)
G71221 NA non-coding upstream 155184 18028361 ~ 18030548 (+)
G71167 NA non-coding upstream 543294 17641910 ~ 17642438 (+)
G71162 NA non-coding upstream 577902 17607512 ~ 17607830 (+)
G71133 NA non-coding upstream 844815 17340700 ~ 17340917 (+)
G71132 NA non-coding upstream 845163 17340342 ~ 17340569 (+)
G71331 NA non-coding downstream 342177 18538480 ~ 18538700 (+)
G71333 NA non-coding downstream 344580 18540883 ~ 18541336 (+)
G71334 NA non-coding downstream 347471 18543774 ~ 18543998 (+)
G71442 LOC103022703,LOC103363874,LOC107673729,LOC107721018,LOC107596080,LOC107660614,LOC107555938 non-coding downstream 551608 18747911 ~ 18892052 (+)
LOC122351431 NA non-coding downstream 693620 18889923 ~ 18893969 (+)
lrp1bb lrp1b,LOC107661145,LOC107660661,LOC107746259,LOC107714450 other upstream 221488 17736006 ~ 17964244 (+)
G71130 NA other upstream 846110 17339127 ~ 17339622 (+)
jam2b LOC107748130,LOC107673722,LOC107695483,LOC107595821,LOC107597562 other upstream 977512 17203797 ~ 17208220 (+)
si:ch211-218d20.15 LOC107748193,LOC107695487,LOC107756736,LOC107673701,LOC107597587 other upstream 1266442 16916761 ~ 16919290 (+)
mpc2b mpc2,LOC107695492,LOC107673680 other upstream 1436031 16745893 ~ 16749701 (+)
clasp1a clasp1a,LOC107741904,LOC107555920,LOC107660633,LOC107673735,LOC107714287 other downstream 353633 18549936 ~ 18610928 (+)
tfcp2l1 tfcp2l1,LOC107673739,LOC107714264,LOC107596086 other downstream 415692 18611995 ~ 18619387 (+)
plcd4b plcd4b,LOC107741909,LOC107673750,LOC107714237,LOC107660629,LOC107596071 other downstream 438803 18635106 ~ 18642486 (+)
lmln lmln,LOC107741941,LOC107555912,LOC107673747,LOC107596075,LOC107714369,LOC107660656 other downstream 486369 18682672 ~ 18689542 (+)
cps1 cps1,LOC107660611,LOC107741925 other downstream 700299 18896602 ~ 18931462 (+)

Expression


Co-expression Network