slc49a4 (dirc2,LOC107597477,LOC107596062)


Basic Information

Item Value
gene id slc49a4
gene name dirc2,LOC107597477,LOC107596062
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 18205648 ~ 18240718 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249404.1
GCATGCGCATTAAAGTTTGGAGGGTAGCTGAGAGTGTCAtcggttgtttttgtttggatgGGCAGCTGACAATTGAACGACTGCCCTAGTTTTTAATGTGGCATGTTATAGACGTTGCCGGATAGCatatagacattttaaaacgtGACGCCACGTCTTTTCAATGGGTGCCGTGGAAAGCACCGAAGGAGAAAGGGAGCCTTTGCTGCTTCCATCCCAGCCGGCGACAAACACACAGCCTGTGTTGAGCAGGGTGTACGGGAGAAGATGGTTTGTTCTCACCATGTTTTCATTGTTGGGTTTTATGCAAGGACTTGTGTGGAACACATGGGGCCCGATCCAGAACTCCGCCAAACATGTGTTCGAGTTCTCCTCGACAGATATCGCGCTGCTGGTGTTGTGGGGTCCAGTGGGTTATCTGCCCTGGCTGCTGTTTATGTGGTTAATGGATAAGAAAGGTTTGCGAGCGTCTCTGCTGCTGTCAGCATTCTTCATGGTCCTGGGTGCAGCGTTACGAAGTGTTCCTCTCAAAGACCTGTGCTACAGACGATGgATGATTCATGGAGGTCAACTTCTGAATGGTTTAGCAGGTCCTACCATTATGAGTGCCGGTCCTCTTCTCTCTACTACTTGGTTTGCTCCTGATCAGAGAGCTACAGCCACCGCTATCGCGTCACTTATTGGCTACCTGGGTTCCGCCTGTGCCTTTCTGATTGGTCCGTTGGCTGTCCCTGCACCTAATGGCACTGTGGGAAGCACCGTTTACTGGACCCAAAACCACATCGGAGACAGGATACAGTTTGTTCTTTACGCAGAGGTTGGGATGATTGCAGCACTTTTCGTGGCTGTGCTGTTCTACTTCCCCTCCAGGCCGCCCATCCCTCCCAGCGTGGCAGCAGCTAGCCAACGTCTCAGCTACAGGAGCAGCATCTGCAGACTGCTGAGCAACATGCGTTTCCTGATGATAGCACTCGCCTACTCCGTGCCCACAGGGGTTGCTGCCGGCTGGGCCGGAGTGTTGGACATGATTTTAACACCTGCTAAAGTCAGCCAGGTGGACGCGGGCTGGATCGGGTTCTGGTCCATCGTTGGAGGCTGTGTGTTTGGCGTGGCCATGGCGAGGTTTGCTGACTATATTCGAGGAATGCTGAAGCTAATTTTGGTGCTGATGTTTGCCGGAGCATCCTTGGCGGCCACCTGGTTCACTCTCACCTGCCTGACCAGGCTTACTCACCTGCCCTCCACTAAAGCTACTCTCTACACCTCCTGCATCCTGGTGGGTATCTTCATCAACAGTAGTGTGCCCATCTTCTTGGAGCTGTTCATTGAGACGGTTTACCCTGTTCCTGAGGGCATCACCTGCGGAGTGGTCACCTTCCTCAGCAACCTCTTCACTGGACTTCTGCTGTTTTGCCTCACCTTTTACTTTACAGagctGTCCTGGTTAAACTGGTGTCTGACAGGCTCCTGCATCTTCAGtctcctgctcctcctcttcttcaggGAATCATACGACCGCCTCTATTTGgatgtctttgtctctgtctgagCGCACCgcgagagtttttttttttttttcaaaggcttGTCTTTACATGGGCACGGTATTCCAGCAGAGTGCAGAGAAAGGGCACACAGCATGTTGCTCACTTTCATGGATcggtgttgttgtttttttgttttttggtttttttgaaagaatgttgtaattgtgaaatatatgaCCAGCGGTGGTGGCAGTGCATTGTGTTAGCATCATAACTAACAGCGGGAACTGAGACCCGACTAAGGAGGGAAGAAGTGTAGATGCTGACCTTTCTACTTGACATTTTGCCTTCTGGATGCAtcccttttttatattttatttgactttttttatttgtaccttttttattattttttaaaaatatgattaatggAAGTTATGTGTTTACATACTGGCACAATATAAGAGACTTTTATTGCATAGAGAGGCACAAGCGGGGCTACTTACGGATTTGGCATTGCCCCATGGTGATGACTCCTCTAGTGCTCTCACCACATCTAATGGGAGTGTAATGGATAATTATAGACAAGCTCAATTAGCCGCCTGGCGAGAGCTACGGCCGCCTGTGGAACGGGGACCTCCTTAGAGCTGTAGTGTCACTTGTGAATAGCCTGTGGGATCCGAGCTTTAATTGACCTGTGATAGGCTGTCAATAAGTGGCATACGCTGTGgtcttcttgtttttcttatcAACCCATATTATGCAAAAGATAATTCCCTCTGCTGTGGGGTTTTGCTACTCACCTTGCAGCCGTTAAGTCCGATTCTGAGTCATGTTACCTCGAGGCATCTGAGGTCACAGTTTACGTGATGAGGGGATCTATAGTATTCATGTTTAGGTAGGTCTTTGTGTTCGTCCCATTCTCATGTTTATAACTGTAGCATGCGCACAGTGGCTGTCTGTTGCACAAGCCTTTTAGAATTTTATGCAATTGATCATGCATTTAGCTGTAATTTATTAACTCGTTTTAGGGATTAATACACTAAAGTGGACTATAAGGGATTGTTAATGGTCTGAGTACTGTTGCAAGAGAGCGGGTTAAACACGGTGTTATGGTAGTGCTGGAACAGTACAACACTATTCACCAGCAATAACAGCCATGTTCGGGAGCCTTTCGTGATTTGTGGCGTAACCTAATGCAAAAACGAGTGCAATACTCTCTCTCGAGTTTAAAATATAGCCTGGCGTATGACCCCGTGCGCCTACCGGGCTGTTCTCTCCTgcatttttgagatttaaatCTCCATTTGAATCTGGTCTAGTTTGCCGCGTTCACCTGGTGAAATTCAGCAGCTTGAGACTCGCTGTTGGATTTAGTGTTGATTTCAGTGGAACTGATTGACGGACAAGGAAAAGCATTTTATGGACACGTTTCCAACTGAGAACTTTGGACTCTCTTTCataaacgcgcacacacacacacacacacatacggttCTGTTCTCTGGGAAAAGCCTGCATGTGAATCACTTTCCGTGTCTTTGTACAGAACGGTTCTCTATTTTACCTGTCGTTAACGTTGCCTTAATTAACCGTGACCTTTGTTCTGTCGTCCTCTCCACTGTGATGTGCGTGCCGTGCTGCAGTCGGTGCTTGTGCTCTGTTCTGTCactgtaattttaattgtaagtgGCACTGGAGAGGCGTACGTGCCCCTGTCCATGTGCAGATACATGTCAAAGATTTTTAGcaccttattaaaaatgtttttcaaaaggaA

Function

symbol description
dirc2 MFS transporter, FLVCR family, disrupted in renal carcinoma protein 2

NR:

description
disrupted in renal carcinoma protein 2-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15381 DIRC2, SLC49A3; MFS transporter, FLVCR family, disrupted in renal carcinoma protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249404.1 True 3267 mRNA 0.47 9 18205648 18240718

Neighbor

gene id symbol gene type direction distance location
slc15a2 slc15a2,LOC107722867,LOC107660645,LOC107597582 coding upstream 9345 18185732 ~ 18196303 (+)
gli2a gli2a,LOC107722873,LOC107660646,LOC107661135,LOC107714335,LOC107596061 coding upstream 26423 18113553 ~ 18179225 (+)
inhbb LOC107597480,LOC107722876,LOC107660647 coding upstream 148904 18049032 ~ 18056744 (+)
si:dkey-3d4.3 LOC107597481,LOC107660648,LOC107596097,LOC107661133,LOC107714494,LOC107597559 coding upstream 158698 18040897 ~ 18046950 (+)
atp1a1b atp1a1b,atp1a1,LOC107656784,LOC107756749,LOC107569141 coding upstream 533131 17662488 ~ 17672517 (+)
pdia5 pdia5,LOC107661141,LOC107596065,LOC107660642,LOC107555900 coding downstream 128025 18368743 ~ 18412641 (+)
sec22a sec22a,LOC107722877,LOC107555913,LOC107660641,LOC107596098,LOC107661143,LOC107714480 coding downstream 175465 18416183 ~ 18425068 (+)
stam2 stam2,LOC107661142,LOC107596068,LOC107555917,LOC107714296,LOC107660637,LOC107741902 coding downstream 259584 18500302 ~ 18510026 (+)
cacnb4a cacnb4,cacnb4a,LOC107660636,LOC107741900,LOC108434427 coding downstream 277494 18518212 ~ 18537051 (+)
nifk nifk,LOC107741903,LOC107660635,LOC107555919,LOC107714465,LOC107580417 coding downstream 305518 18546236 ~ 18549389 (+)
G71221 NA non-coding upstream 175100 18028361 ~ 18030548 (+)
G71167 NA non-coding upstream 563210 17641910 ~ 17642438 (+)
G71162 NA non-coding upstream 597818 17607512 ~ 17607830 (+)
G71133 NA non-coding upstream 864731 17340700 ~ 17340917 (+)
G71132 NA non-coding upstream 865079 17340342 ~ 17340569 (+)
G71331 NA non-coding downstream 297762 18538480 ~ 18538700 (+)
G71333 NA non-coding downstream 300165 18540883 ~ 18541336 (+)
G71334 NA non-coding downstream 303056 18543774 ~ 18543998 (+)
G71442 LOC103022703,LOC103363874,LOC107673729,LOC107721018,LOC107596080,LOC107660614,LOC107555938 non-coding downstream 507193 18747911 ~ 18892052 (+)
LOC122351431 NA non-coding downstream 649205 18889923 ~ 18893969 (+)
lrp1bb lrp1b,LOC107661145,LOC107660661,LOC107746259,LOC107714450 other upstream 241404 17736006 ~ 17964244 (+)
G71130 NA other upstream 866026 17339127 ~ 17339622 (+)
jam2b LOC107748130,LOC107673722,LOC107695483,LOC107595821,LOC107597562 other upstream 997428 17203797 ~ 17208220 (+)
si:ch211-218d20.15 LOC107748193,LOC107695487,LOC107756736,LOC107673701,LOC107597587 other upstream 1286358 16916761 ~ 16919290 (+)
mpc2b mpc2,LOC107695492,LOC107673680 other upstream 1455947 16745893 ~ 16749701 (+)
clasp1a clasp1a,LOC107741904,LOC107555920,LOC107660633,LOC107673735,LOC107714287 other downstream 309218 18549936 ~ 18610928 (+)
tfcp2l1 tfcp2l1,LOC107673739,LOC107714264,LOC107596086 other downstream 371277 18611995 ~ 18619387 (+)
plcd4b plcd4b,LOC107741909,LOC107673750,LOC107714237,LOC107660629,LOC107596071 other downstream 394388 18635106 ~ 18642486 (+)
lmln lmln,LOC107741941,LOC107555912,LOC107673747,LOC107596075,LOC107714369,LOC107660656 other downstream 441954 18682672 ~ 18689542 (+)
cps1 cps1,LOC107660611,LOC107741925 other downstream 655884 18896602 ~ 18931462 (+)

Expression


Co-expression Network