hspbap1 (LOC107722869,LOC107661136,LOC107660643)


Basic Information

Item Value
gene id hspbap1
gene name LOC107722869,LOC107661136,LOC107660643
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 18197126 ~ 18205461 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249405.1
CTAGCTTGAAAATGGATTTTAGCTGTGCTTACATATgtgtagataaaaaaaaatctaaatatttatgtttgtacATTTTACTATAAAGTTCTATCACATACTACCTGATTTGACCTAGATATAGTTTTGACTTTGTGATTCACTTGAACGATTGTGATGTGTTTATCCGTGCTTTAAAGTGAAACTCCTACAGTTTATCTGATAAGACTTGTGTTATACAAGACAAAATCCACTCATCCTAACCGCCCTtatctcattatttttatgtagaaTGGCAACAAAACCCTTTACCCCAGAAGAGGCTAGGAGGATTATCCAGTTTCTACAGAAACCTGCTGTGTTCCTGAACATGACCACAGACTGGCCAGCATTGCAATGGACTGTGGGAAATCTGTCAACTTGCTTTACAGAGAGGCTTCGATTCCGTATTGGGAAAAAGACTGAGAATATGGCTCCTCTTTTTGAAACGGAATGTTTCTACATTGAAGCAACCATTAAAGAGTTTCTGTCTTGGACTGCCAATGAAGACGAATCACTTGTCGGGCCATTTTCTGACTATCACTGCAAAGAATTCTGGGCTTATGCTGATTACAAGTACATTGCCCAGCTTTTTCAGGATAAACCTGCAAAGTTTCAGGATGTGGTGTGGTCTGACTTTGGTTTTTCCGGCCGAGATGGACGAGACAGCACACTTTGGATTGGGACGCAGGGCGCTAACACTCCTTGTCACCTCGACTCTTACGGTTGCAATCTTGTCTTTCAGATACAAGGCAGaaaACAATGGTATCTCTTTCCTCCCGAAGACACGCATTGTCTCTATCCAACGCGCGTGCCATACGAGGAGTCCAGCGTGTTCAGCCAGGTCAGTGTTGTCCAGCCAGACCTGAAGAGGTTCCCATCATTCAGAAGAGCTCGAGTCCACACCGTCACTCTGCAGCCTGGTCAGGTTCTGTTTGTGCCCAGACACTGGTGGCACTATGTGGAGTCAGTGGATCCAGTGACTGTCAGTGTGAACTCCTGGATTGAGATGGCTGTATTTGTCTTTATGCCGTAGGACATGGACGATGAGGCCAGAGTAGGAGAAGCGTTCACTAAAACTATTGTGTGTGCCCTGAAAAGTGCCCCCAGCTTAGACAACAATGACCACTGGCTCAATCCTACTGAGG

Function

NR:

description
HSPB1-associated protein 1 homolog

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K19375 HSPBAP1; HSPB1-associated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249405.1 True 1166 mRNA 0.44 6 18197126 18205461

Neighbor

gene id symbol gene type direction distance location
ralba ralba,ralb,LOC107746258,LOC107597482,LOC107596059 coding downstream 158458 18028354 ~ 18038668 (-)
dnajc28 dnajc28,LOC107748188,LOC107673653,LOC107597584,LOC107756751,LOC107656783,LOC107569146 coding downstream 545005 17649975 ~ 17652121 (-)
zp2l1 NA coding downstream 622752 17559528 ~ 17574374 (-)
appb appb,LOC107597486,LOC107748127,LOC107595805,LOC107756757,LOC107695460,LOC108426075 coding downstream 881308 17299245 ~ 17315818 (-)
si:ch211-160b11.4 NA coding downstream 998735 17196411 ~ 17198391 (-)
adcy5 adcy5,LOC107555914,LOC107661140,LOC107660638,LOC107596066,LOC107714401 coding upstream 221611 18427072 ~ 18492873 (-)
hacd2 hacd2,LOC107660639,LOC107741899,LOC107661144 coding upstream 288625 18494086 ~ 18499894 (-)
si:dkey-219c10.4 LOC107741933,LOC108266238,LOC106586425,LOC102795313,LOC101468032,LOC107673728,LOC107660664,LOC107555910 coding upstream 329191 18534652 ~ 18545151 (-)
ccdc93 ccdc93,LOC107741907,LOC107555923,LOC107596073,LOC107714249 coding upstream 420956 18626417 ~ 18633604 (-)
znf142 LOC107741908,LOC107555924,LOC107660628,LOC107714222,LOC107596070,LOC107673749 coding upstream 437009 18642470 ~ 18649055 (-)
LOC122352098 NA non-coding downstream 461207 17733203 ~ 17735919 (-)
G71194 NA non-coding downstream 504306 17665519 ~ 17692820 (-)
G71190 NA non-coding downstream 535681 17661216 ~ 17661445 (-)
G71175 NA non-coding downstream 551206 17644438 ~ 17645920 (-)
G71187 NA non-coding downstream 553450 17643356 ~ 17643676 (-)
G71293 NA non-coding upstream 16853 18222314 ~ 18226787 (-)
G71339 NA non-coding upstream 302979 18508440 ~ 18510009 (-)
G71341 NA non-coding upstream 305712 18511173 ~ 18511528 (-)
G71389 NA non-coding upstream 403366 18608827 ~ 18697031 (-)
G71400 LOC107555927,LOC107660626,LOC107741910,LOC107660658,LOC107660625,LOC107578255,LOC107714212 non-coding upstream 448166 18653627 ~ 18654751 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other downstream 675566 17364187 ~ 17521560 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other downstream 941635 17235872 ~ 17255491 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other downstream 1307579 16886753 ~ 16889547 (-)
G70986 pou2f1b,LOC107748141 other downstream 1373351 16817140 ~ 16823775 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other downstream 1450904 16720804 ~ 16746222 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other upstream 45775 18251236 ~ 18366267 (-)
LOC122352185 NA other upstream 364294 18569755 ~ 18569882 (-)
ankar ankar,LOC107728908,LOC107660654 other upstream 1514481 19719942 ~ 19731794 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other upstream 1590791 19796252 ~ 19829475 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other upstream 1628459 19833920 ~ 19852625 (-)

Expression


Co-expression Network