hpxa (LOC107690487,LOC107719811,LOC107595840)


Basic Information

Item Value
gene id hpxa
gene name LOC107690487,LOC107719811,LOC107595840
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 15974565 ~ 15978301 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249419.1
CTCTGGTGGAGGGTATAAATTGGGGACATCAGGTTGTGCTGTACCTTCTCCAGCTGAGCTCTGTCTCACCAGAGGACACTGCTGACCATGAAGCTCGTTCAAACGCTCACTCTGTGCCTGGCTCTCTCTTTGAGCCTCGCTGCTGCTTCGCATCATCAGGAGGGTCATGCTCAAAATGATAAACCTAAACCTGGGGAACATAAGCATGAAATGCACCATGGTGCTAAGCTTGACCGCTGTCAGGGGATGGAGTTTGACGCAGTTGCTGTGAACGAGGAGGGATTTCCTTACTTTTTCAAGGGTGACCACCTGTTCAAGGGTTTCCATGGCAAGGCTGAACTGTCTAATGAAACTTTCCCTGAGCTGGATGACCATCATCACCTGGGACATGTGGACGCTGCATTCCGCATGCACTCTAAAGAGAGCCCAGACCACCATGACCACCAGTTCTTCTTCCTGGACACTAAGGTCTTTAGCTACTACAAGCACAAGCTGGAGAAGGGCTATCCCAAAGACATCTCAGAAGTTTTCCCTGGAATTCCTGACCATTTGGATGCTGCAGTGGAGTGTCCCAAGCCAGACTGTACTAATGACACCGTAATCTTTTTCAAAGGTGATGATATCTATCACTTTGATATGACGACCAAGAAGGTTGATGAAAAGGAATTCAAGAGCATGCCCAACTGCACCGCAGCCTTCCGTTACTTGGATCATTATTACTGCTTCCATGGACATATGTTCTCAAAGTTTGACCCAGTTACAGGAGAAGTTCAGGGCAAATATCCAAAGGAGGCCCGTGACTACTTCATGAGATGCCCACATTTTGGACAAAAGAGTACTGATGACCACATTGAGAGAGAGCAGTGCAGCCGTGTGCACTTGGATGCTATTACATCTGATGACGATGGTAGTGTATATGCTTTCAGAGGACACCACTTCCTCAGCATAACTGGTGATAAGTTTCATTCAGACACTATTGAGAGTGCTTTCAAAGAGTTGCACAGTGAAGTGGATGCAGTCTTCTCTTATGAAGGCCATCTCTACATGATCAAGGATGATGAGGTGTTTGTGTACAAAGTTggaaagccacacacacacctagaAGGTTACCCCAAACCCCTAAAGGATGTCCTGGGAATTAAGGGTCCCATAGATGCTGCCTTTGTGTGCGCAGACCATCACATTGCTCACGTCATCAAAGGTCAAACCGTTTATGATGTTGACTTGAAAGCCACCCCACGTGCGCCTGTGAAAGAAGGAACCATAACacacttaaaaaatattgatactGCTATGTGTGGCCCCAAGGGTGTGACGGTGGTGATCGGTAACCATTACTACCAATATGCGAGTCCCATGATCATGATGACGGCCAGAATCATGCCTGAACAGCACAGGGTGTCTCAGGAGCTGTTTGGCTGTGACCACTAGAGGGAGGCATACAAAGAATGAGAGGAAGAATTGCTGTACAAGTGACCTAGTCTGTACAGGCTGTGTATCATGAAAATAGCCACAGTAACTGAACTGACTGGGATTTTCAATCAGTAACGTATCCACTTTTCTCCAGCTTTTGTCAAACCCGATCTCAAAAGAAAATTCCTACCTCCGAAGTTCTGCTTGAATATTTTATCCCACCATAAACATCAGAACATACTTTTTTAAGCTCTATCAATATGAAATACTTACATATTTCACCTTGGTCAGTATACTCTTtggttaataaataatcttataccatt

Function

NR:

description
hemopexin-like protein, partial

GO:

id name namespace
GO:0071391 cellular response to estrogen stimulus biological_process
GO:0006810 transport biological_process
GO:0005576 extracellular region cellular_component
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249419.1 True 1739 mRNA 0.45 10 15974565 15978301

Neighbor

gene id symbol gene type direction distance location
LOC122351640 LOC107719827 coding downstream 1004 15966763 ~ 15973561 (-)
gatd3 zgc:112056,LOC107731744,LOC107570103,LOC107595889,LOC107659887,LOC107690602,LOC103039907,LOC105908687,LOC108412974,LOC106582488 coding downstream 8098 15963794 ~ 15966467 (-)
olig2 olig2,LOC107659900,LOC107719825,LOC107595891,LOC107731746,LOC107569749,LOC107690629 coding downstream 31475 15940890 ~ 15943090 (-)
olig1 olig1,LOC107731749,LOC107569756,LOC107683299,LOC107719828,LOC107659903,LOC107595892 coding downstream 42029 15930621 ~ 15932536 (-)
ercc1 ercc1,LOC107570013 coding downstream 60995 15909284 ~ 15913570 (-)
LOC122351503 LOC107731735,LOC107690619,LOC107690492,LOC107595881,LOC107570033,LOC107719821 coding upstream 19840 15998141 ~ 16006044 (-)
fhip1b fam160a2,LOC107690600,LOC107731760,LOC107690485,LOC107569793,LOC107719813 coding upstream 27879 16006180 ~ 16024933 (-)
casq2 casq2,LOC107569839,LOC107690483,LOC107595834,LOC107756748,LOC108432573 coding upstream 114429 16092730 ~ 16097066 (-)
slc5a3b slc5a3,LOC107748166,LOC107673698,LOC107569828,LOC107690482,LOC107595832,LOC107756792,LOC568338 coding upstream 128458 16106759 ~ 16116264 (-)
rpl8 rpl8,LOC107595836,LOC107748161,LOC107673716,LOC102782025 coding upstream 203453 16181754 ~ 16183111 (-)
LOC122352066 NA non-coding downstream 20589 15948113 ~ 15953976 (-)
G70660 NA non-coding downstream 211896 15762383 ~ 15762669 (-)
G70633 pikfyve,LOC107719798,LOC107681306,LOC107731754 non-coding downstream 330289 15642259 ~ 15644276 (-)
LOC122351574 NA non-coding downstream 336129 15628883 ~ 15638436 (-)
G70581 NA non-coding downstream 552988 15418999 ~ 15421577 (-)
G70894 NA non-coding upstream 139981 16118282 ~ 16120319 (-)
LOC122351188 NA non-coding upstream 627066 16605367 ~ 16631420 (-)
G70955 NA non-coding upstream 631969 16610270 ~ 16610561 (-)
G70956 NA non-coding upstream 634816 16613117 ~ 16613424 (-)
G70967 NA non-coding upstream 652185 16630486 ~ 16715102 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other downstream 202701 15771421 ~ 15771864 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other downstream 575128 15389218 ~ 15399437 (-)
G70549 NA other downstream 668590 15303103 ~ 15305975 (-)
LOC122351495 NA other downstream 1601891 14359646 ~ 14372674 (-)
G70317 NA other downstream 1720789 14196479 ~ 14253776 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other upstream 742503 16720804 ~ 16746222 (-)
G70986 pou2f1b,LOC107748141 other upstream 838839 16817140 ~ 16823775 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other upstream 908452 16886753 ~ 16889547 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other upstream 1257571 17235872 ~ 17255491 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other upstream 1385886 17364187 ~ 17521560 (-)

Expression


Co-expression Network