znf148 (znf148,LOC107673743,LOC107660621)


Basic Information

Item Value
gene id znf148
gene name znf148,LOC107673743,LOC107660621
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 18734419 ~ 18740056 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249454.1
GCTGCGCAGCTGCAGAAGGAATGTAGCTCGCTAGCCTCTCATGCTAGCAGCAGCATCGCAGTAAAGTTTGACAAACACATCATGAGCGGCTCGAACCCGCCGCCAGCGCTGCTCTGACGACACATGCGGTTGACGGAGAGGAAGCGCTGTGAACACAACTGCTGATAGGAATCCTTATGTTGGTCCTGTCTATTCCTGTAGCATCAGCTCAACTGCTTAGCGTTCAGCGATGAACATTGATGACAAGCTGGAGGGGTTGCTTATGAAATGTAGCCCTGTGGGGCTTCACCACTCATCCAGAGGTCTGGGACCCTCCAGGGTCGatggaagaggaagaagaggcaGTTTGGATATGACACTTGGGGAACGGAGCTTGGCTAATCATCCCCTTTTGGcagaggatgatgatgatgatgacgatgatgatgatgacgaagACATGGCAGGTGGAGGCCTGACCTCCCATGATCTGATATCCCAGGATGACCTGATGGTTCATGAAGAGACTGTAAAAAATGACGGACAGTGTGACGCAGCTTTCTCCCAGCGAATCTCCCATAAATTACACTATACACTCAATATGCCAGTAAATATAAAACAGGAGATGAAAGTGCCAGACTCACTGATTCTGaataaaaaggagaagaaaCCAGGGAGGGACCCTTCTGACTGtcacaaaaagaagaagagaaagcagCGCTCGCCTGCAAAGATTCTCACTATTAATGAAGATGGCTCCCTTGGGCACCAGAACCCAAAATCTCATGTCTGTGAGCACTGCAATGCTGCTTTTCGGACAAACTACCATTTACAAAGACACGTCTTCATTCACACAGGTGAAAAGCCTTTTCAGTGCAATCAGTGTGACATGCGCTTTATTCAGAAGTACCTGCTTCAGAGACATGAGAAGATCCACACAGGGGAAAAACCTTTTCGCTGTGATGAGTGTGGAATGAAGTTTATTCAGAAATACCATATGGAGAGACATAAGAGGACCCACAGCGGGGAAAAGCCTTACCAGTGCGACTATTGTCATCAGtTTTTCTCCAGAACTGACAGAGTACTAAAGCACAGACGGATGTGCCATGAAAATAAGGACAGGAAGGTGCAGAAAGCAGCTGCCAAAGATGGCCCTCTTCGTACCTCAGAGAGCTTGGGCTTCTCTTTTCCTGCCAAGGAATGCACGCTTCCCAAGAAGAAACGTCAGAAGACCTCTGATAAAAGTCGGGTTGCCCTTACAAGTCCAAATGTTGACAAAGTGGTCGAAGCTAATAGCgaggagaagacagaagaagaCCAACTGGCCAAAAGTGAGTGTCTTCCTCTTTACACTGTAGACACCAAGGTCAAGGACGAGTATGTTGTGACAGATTATTCCGTTGAGCTCCCTGATTCCCCGCCTGGCAACAGGCATCTTGCAGAGGTGGAATCTAATGATGAAATCATCAGTCCTCCAAAACTAGTACTGAAGAAAATCGCTAGCAGAAGAGGTTTGAAACCGCAAGCCCTAGAACAGCCCCAGAGCCTCTCACCGTTGGCCTCATTCGAAGAGAGCAAAGTAACGAGATACACATTTGAAATTGTTGACAACAAAGGCCTCTTGGATGTTGAGACCAATCCTGACATGGAGTCAGTTCACGCCCTACAGgaaggacaaacaaaaccaactGGGAGCAGCACAAATTACGACGATGCCATGCAATTTCTCAAGAAGAAGCGATACCTTCAAGCGGCAAACACTAGTCGAGACTATGCGCTCAATGTGAGCAGCATCGTGTCGCAACCTTCTGTCACTCAGGCAGCTGTAGCGAGCGTCATCGATGAGACCGTTCCTGCAACAATCCTTTCTGAGACTCAGACGCTGAACGTGGAGATCAAGTCCAGTAACGAGAAAAACGTCCTTCCAGACGAGGTCCTGCAGACTCTTCTTGATCACTATTCCAATAAGGCCAACGGGCAAGCAGAGATTTCCTTCAGTGTGGCAGACACCGAGGTCACATCCAGTATCTCTATCAACTCTTCCGATGAGAGCAGTCCTACCGAAACTTTGGGAACCAGCTCGCAAGCACCCCCGGCCGAGAAGGCCAGCCTTCTACAGGAGTACTCCAAGTTTCTCCAGCAAGCATTGGAAAGGACCAGTCAGAATGACACCTACCTGAACAACCAGAGTCTTACGTTTGTAAATGACAGCGCCAGTCTCGCTGGCCAGCCTTTGTTTTCTACGGAGAAGCAGTTCACATCCCCATCCCGGTTCAGACCGAGCATGAACTCACCATTGAGATCCACCTTGGAGAAGCCTAACTTTAGCCTTTTAGTAGATTCCCAGCACTCCTTCTCCTTTTCAGGTGATGAGACAAACCCTTCTTCAGTTTCGCCAACAGAGGATTTCGACCAAGTGACCTCTCCCAAAAAATCAGATGCGCAAAGCATTAGTCAAACATTTCAGATTGCTACCTTTGACCAGAACTTTCGATCTCAATTCCCAAGCTCACGATCTGGAATATCCTCACAGTTTAGCATTGCCAGTGGACAAGTTAGTCTGAGAGGTCATGGAGGAACGGACTTCCCAGAGTTCTCTCTTGTTAGTGAAACAAGAACTCAACTAACTTCATCTCCAGATGCTACAAGCAGCCAAACCTTTGGCTAAACAGGAGCTTTTaacaaatgaaagcattttaaaggcACTTTATAGTTCTGTCAGTGAAGGCAGTGTGATCTCTGTGCAAATACTTATGATTTTCCATCTTCAAACAATCACGCATGTGCGAGAATCAAATGGAGCAGAGTGATGCACGCATTAGACTTTATTATCAGACTATGGGTTACTCTTTGCGTCATTGCATTATTTGTGTGTTACACATGTAGTGCTTGGGACAAACATACAGTGGCTTGCAAAATTAGCTAGCTTGTGTGTTCTAAAATTAAGAATTCAAGCTATTACAACAATGCTGTTGTAGTAGTCTAAATTATTGGGTCAACGTAGCTTTCCCCCAGAGAAAACTATACGAAGATCAATTCTGATTTATATTCTTGTTAGCATTCAGTTATTTTGCTGGAACATCAGGCTGGACTCACCTAATAATGTAGAAACTACTCTAGCCTAGCATTACAAtcagtttttgtatttaattagttttgtaACTTGTTGTCTGGAGAGGTACTGAAAGGACCTTACTTTAGTGCCCTAGACTTGAGTAAGGCACTTTGTGATTGATATACTGCAAGTCacttttgtttataaaaaaaaaaaaaaaaggtaacatttCTCACCTTTGTCATTGTAAGctaatttgtgtatttaatcTTCTTTGTGCATTTAATTACTTGTtagaatgtttatatatatatatatatatatata

Function

symbol description
znf148 Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within hemopoiesis. Predicted to be located in nucleus. Is expressed in anterior lateral plate mesoderm; brain; intermediate cell mass of mesoderm; and posterior lateral plate mesoderm. Orthologous to human ZNF148 (zinc finger protein 148).

NR:

description
zinc finger protein 148-like

GO:

id name namespace
GO:0030097 hemopoiesis biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003677 DNA binding molecular_function

KEGG:

id description
K24370 ZNF148; zinc finger protein 148

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249454.1 True 3361 mRNA 0.45 8 18734419 18740056

Neighbor

gene id symbol gene type direction distance location
snx4 snx4,LOC107660619,LOC107741918,LOC107555933,LOC107714137,LOC107673751 coding upstream 1406 18721173 ~ 18733013 (+)
osbpl11 LOC107741915,LOC107555931,LOC107660623,LOC107596076,LOC107714164 coding upstream 26226 18692575 ~ 18708193 (+)
lss lss,LOC107714200,LOC107673746,LOC107660663 coding upstream 52217 18675151 ~ 18682202 (+)
LOC122351791 LOC107555929,LOC107660624,LOC107741913,LOC107714185,LOC107673745,LOC107596074 coding upstream 59681 18663351 ~ 18674738 (+)
LOC122351850 LOC107555927,LOC107660626,LOC107741910,LOC107714212,LOC107660625,LOC107596087 coding upstream 71549 18659765 ~ 18662870 (+)
slc12a8 slc12a8,LOC107741923,LOC107660618,LOC107673744,LOC107714115,LOC107555904 coding downstream 2754 18742810 ~ 18760266 (+)
heg1 LOC107555935,LOC107741920,LOC107660617,LOC107673741 coding downstream 20404 18760460 ~ 18771739 (+)
kansl1l LOC107741922,LOC107660662,LOC107555936,LOC107596092 coding downstream 33704 18773760 ~ 18791366 (+)
map2 map2,LOC107673740,LOC107555937,LOC107741924,LOC107660616,LOC107596094 coding downstream 53025 18793081 ~ 18884325 (+)
hibch hibch,LOC107660603,LOC107714371,LOC107741945 coding downstream 902993 19643049 ~ 19666613 (+)
G71334 NA non-coding upstream 190421 18543774 ~ 18543998 (+)
G71333 NA non-coding upstream 193083 18540883 ~ 18541336 (+)
G71331 NA non-coding upstream 195719 18538480 ~ 18538700 (+)
G71221 NA non-coding upstream 703871 18028361 ~ 18030548 (+)
G71167 NA non-coding upstream 1091981 17641910 ~ 17642438 (+)
G71442 LOC103022703,LOC103363874,LOC107673729,LOC107721018,LOC107596080,LOC107660614,LOC107555938 non-coding downstream 7855 18747911 ~ 18892052 (+)
LOC122351431 NA non-coding downstream 149867 18889923 ~ 18893969 (+)
G71457 LOC107662043,LOC107555909,LOC107741926,LOC107556197,LOC107660610,LOC107721020 non-coding downstream 240257 18980313 ~ 18985811 (+)
G71509 NA non-coding downstream 510783 19250839 ~ 19251157 (+)
G71517 NA non-coding downstream 515974 19256030 ~ 19256233 (+)
lmln lmln,LOC107741941,LOC107555912,LOC107673747,LOC107596075,LOC107714369,LOC107660656 other upstream 44877 18682672 ~ 18689542 (+)
plcd4b plcd4b,LOC107741909,LOC107673750,LOC107714237,LOC107660629,LOC107596071 other upstream 91933 18635106 ~ 18642486 (+)
tfcp2l1 tfcp2l1,LOC107673739,LOC107714264,LOC107596086 other upstream 115032 18611995 ~ 18619387 (+)
clasp1a clasp1a,LOC107741904,LOC107555920,LOC107660633,LOC107673735,LOC107714287 other upstream 123491 18549936 ~ 18610928 (+)
lrp1bb lrp1b,LOC107661145,LOC107660661,LOC107746259,LOC107714450 other upstream 770175 17736006 ~ 17964244 (+)
cps1 cps1,LOC107660611,LOC107741925 other downstream 156546 18896602 ~ 18931462 (+)
vwc2l vwc2l,LOC107660607,LOC107657506,LOC107714362,LOC106586444 other downstream 772798 19512854 ~ 19543677 (+)
G71585 NA other downstream 881228 19621284 ~ 19621493 (+)
ormdl1 ormdl1,LOC107602148 other downstream 969308 19709364 ~ 19714404 (+)
si:dkey-10c21.1 NA other downstream 1473339 20213395 ~ 20218120 (+)

Expression


Co-expression Network