LOC122352013 (LOC107733623)


Basic Information

Item Value
gene id LOC122352013
gene name LOC107733623
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 10842440 ~ 10849801 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249480.1
gaaaaatgtatcagttCTATCTAGTGCAGTATCTCTCTGAATGGATATCTTGATTAAAAATCATAAGTTGATTGTTTTCAGTGACAGGCAGATTTGTGATTGTTGCAACGCCCAGAAAAAGCGGCTGGTAAGTCCTTCTAGAAACTCTTCAGAGAGCATCACTTCATCTCAGGCGCTGAAAAGAAGAACCATGCCGCTCACGCCTATTCAAATCTTTATTCTGATGTGTggatatttttacagatttcaCACTATCGAACCTCCGTCTCTCCAAGTCCAGCGTGGATCTGATGTCTCTTTGAGATGTGACGTCCCTTTCCTGTCTGAATCCTCCACATTACACTGGGAGAAAGATGGAGAACAAACATCCAACACCACACTGATGTACAACAACTCTGCCTTCATCATCTTACACACCGTTGATGAACACAGTAAAGGGAATTATTACTGTATTCTGACCAAAGAAGGAAGTGTAGAAACTGTTAagagacacacacttactgTCGCTTCAAATTCACACACTGAAAAATCAAAAGCTTTTCTCATTTACAGACAAAGCTCCAGTAACAGTGAAGTATTACTGATCTGTAAATCTAGAAAGGTATATGAGAACTTGAAGTGGACCTGGGCACCGAGGCCTGATTCACAGATTGATCTGATAGCttttaaacacagaaaacaagttcAGTTAAAAGGACCAATTAAACCGGGGAGACGTTCTTCAAAGGAATACGACAGTCAAGCTTTGATCTTTCACGTCTCACCTGTGAAGTTCAATTACAGTGGGACATACAGGTGTATTACAGAAACAACCACCTACACAACAATCATACTACACACCATCAGAGTGTCAGTGGAGCCCTCTGATGGTGTGTTGATGAATCAGTCAGTGGTTTTTACCTGTCAGCTTTCTGAAGTAACTGGTTCAGTGACGCTGGTCTGGCTCAGGATGGAGGGAAACAGAGGAGTGCTGGTCAAACAGCAAATGatgactaaaaaaaacaaaaatttacaaCTCACAGTAAATGTCTCCAGCTATGAAACAGACCTGATGAACTGGCAGTGTGCAGTTTTTACAGAGAATACACTCAGAGCTCTGGCCCCTGTGACCAACTACAGTCTTACCTCAACAACTACAAATGAACCAGACATATCAACAGAAACCTCAACTGGAACAAACAAAGCAATCAACAAACATGCAAAGACAGCAGCATCTACTGTTTTGGCTCTGTTTATTGTGACTCTGCTTGGAACTCTGTTGTATTACTGCTACAAGAAACGAGTGTCAAGTACAAAAAATACCATCTGTCATTCATTTTTGtcctttaataatattttcacaggGAATGCTTTTTATTCATCCTTACATACTTATTCTTGCTATATTTGCATCATTTCAGTGTACTCTGACCCTCAGGAGTCTGAACCAGTCTACATTAACATCAGCCAAATGAGGATCGAAAGAGCACAGTGTAGCAACAGAGAAAGTCCTGAAATATACCGCAATATAAGACGGAACAGATATGgaaaaacaaacataaataaaagagaTGAGACTACAGTTACCTCAGACAGTGTAACATACGCAACCATTTCTTTCAACAAACCCAGTTTCCAGACTTAGACATAACTCCCCAACAGCATTATGAAAACCTGAAGATAAGAGAATGTTGTCATTTGGTTATATGTCGTGTTTTATTTAAGCTTCGTGAACCTCAAACTATTGTCTCATGGAGAACgcgtaacattttttttattaaacagcaGATGGCGCTGTCTGATTACATAGGCTTTCACCTGAGCAGGTTTAGGAGTGTGATCAAATACTGCCTTCAGTAAACCACCACGAATATTAATCTGATAAAAAGTGGATAATTGCGTCCCTCAGCTAACGTTGTTTTAGTGACTTGTACAAACTAACGTGAATATTATTATGACTTTCGTTGCGATATTTTAGCTGCTTTCATGTAAGTGCAAGTATGCTGGTGAAACGGCCATTTGATGGCACTGTTTGAAAACAtacttgaaatataataataataaaaaagtgtaagtacaaaa
>XM_043249482.1
aatgtatcagttCTATCTAGTGCAGTATCTCTCTGAATGGATATCTTGATTAAAAATCATAAGTTGATTGTTTTCAGTGACAGGCAGATTTGTGATTGTTGCAACGCCCAGAAAAAGCGGCTGGTAAGTCCTTCTAGAAACTCTTCAGAGAGCATCACTTCATCTCAGGCGCTGAAAAGAAGAACCATGCCGCTCACGCCTATTCAAATCTTTATTCTGATGTGTggatatttttacagatttcaCACTATCGAACCTCCGTCTCTCCAAGTCCAGCGTGGATCTGATGTCTCTTTGAGATGTGACGTCCCTTTCCTGTCTGAATCCTCCACATTACACTGGGAGAAAGATGGAGAACAAACATCCAACACCACACTGATGTACAACAACTCTGCCTTCATCATCTTACACACCGTTGATGAACACAGTAAAGGGAATTATTACTGTATTCTGACCAAAGAAGGAAGTGTAGAAACTGTTAagagacacacacttactgTCGCTTCAAATTCACACACTGAAAAATCAAAAGCTTTTCTCATTTACAGACAAAGCTCCAGTAACAGTGAAGTATTACTGATCTGTAAATCTAGAAAGGTATATGAGAACTTGAAGTGGACCTGGGCACCGAGGCCTGATTCACAGATTGATCTGATAGCttttaaacacagaaaacaagttcAGTTAAAAGGACCAATTAAACCGGGGAGACGTTCTTCAAAGGAATACGACAGTCAAGCTTTGATCTTTCACGTCTCACCTGTGAAGTTCAATTACAGTGGGACATACAGGTGTATTACAGAAACAACCACCTACACAACAATCATACTACACACCATCAGAGTGTCAGTGGAGCCCTCTGATGGTGTGTTGATGAATCAGTCAGTGGTTTTTACCTGTCAGCTTTCTGAAGTAACTGGTTCAGTGACGCTGGTCTGGCTCAGGATGGAGGGAAACAGAGGAGTGCTGGTCAAACAGCAAATGatgactaaaaaaaacaaaaatttacaaCTCACAGTAAATGTCTCCAGCTATGAAACAGACCTGATGAACTGGCAGTGTGCAGTTTTTACAGAGAATACACTCAGAGCTCTGGCCCCTGTGACCAACTACAGTCTTACCTCAACAACTACAAATGAACCAGACATATCAACAGAAACCTCAACTGGAACAAACAAAGCAATCAACAAACATGCAAAGACAGCAGCATCTACTGTTTTGGCTCTGTTTATTGTGACTCTGCTTGGAACTCTGTTGTATTACTGCTACAAGAAACGAGTGTCAATGTACTCTGACCCTCAGGAGTCTGAACCAGTCTACATTAACATCAGCCAAATGAGGATCGAAAGAGCACAGTGTAGCAACAGAGAAAGTCCTGAAATATACCGCAATATAAGACGGAACAGATATGgaaaaacaaacataaataaaagagaTGAGACTACAGTTACCTCAGACAGTGTAACATACGCAACCATTTCTTTCAACAAACCCAGTTTCCAGACTTAGACATAACTCCCCAACAGCATTATGAAAACCTGAAGATAAGAGAATGTTGTCATTTGGTTATATGTCGTGTTTTATTTAAGCTTCGTGAACCTCAAACTATTGTCTCATGGAGAACgcgtaacattttttttattaaacagcaGATGGCGCTGTCTGATTACATAGGCTTTCACCTGAGCAGGTTTAGGAGTGTGATCAAATACTGCCTTCAGTAAACCACCACGAATATTAATCTGATAAAAAGTGGATAATTGCGTCCCTCAGCTAACGTTGTTTTAGTGACTTGTACAAACTAACGTGAATATTATTATGACTTTCGTTGCGATATTTTAGCTGCTTTCATGTAAGTGCAAGTATGCTGGTGAAACGGCCATTTGATGGCACTGTTTGAAAACAtacttgaaatataataataataaaaaagtgtaagtacaaa
>XM_043249483.1
GGATATCTTGATTAAAAATCATAAGTTGATTGTTTTCAGTGACAGGCAGATTTGTGATTGTTGCAACGCCCAGAAAAAGCGGCTGGTAAGTCCTTCTAGAAACTCTTCAGAGAGCATCACTTCATCTCAGGCGCTGAAAAGAAGAACCATGCCGCTCACGCCTATTCAAATCTTTATTCTGATGTGTggatatttttacagatttcaCACTATCGGTGAGTCTCGCTTTAATTATCATGTCAAAAGGGAGACTATTCCGTCAAGATATTGTTTGATTCTTCCCTCTTTTGGTATTTCATTTTACTCTACACAGCATACGCATATGCAGAAacagaataatttaataatgatcaaggcatttgaaaaacaaatagagaaatatatatagttttcatGATCTCTTTTGTTAGCGAATTCTAATTAAGTGTCTGTTTAAAGATACATATAaccattttattcaaaacaaatgcTAACAAACTTAAATATGTCAGTCTCAGTGATTAACTATCACTATGTGAAAATACAAAACGATGATTTCTTTGAAAGCATGCAGCCTCTCtttgttgaaatgttttagaaaatgcTGATTATTTTGTTCAGGGTGCTCAGCTGATGCACTAACAGTCTGGTTTGTCCTGAGAAGTTTATTTGTAATAGACGTAACTGCTATGTCGTTTATGCTGTACAGAATATCCagcagttcacacaaaaaaaaaggttggcTGAATTtctgtagaaaaaaacattttttcaagtattaaacattattattataattttttaaaactcaaGAACCTCCGTCTCTCCAAGTCCAGCGTGGATCTGATGTCTCTTTGAGATGTGACGTCCCTTTCCTGTCTGAATCCTCCACATTACACTGGGAGAAAGATGGAGAACAAACATCCAACACCACACTGATGTACAACAACTCTGCCTTCATCATCTTACACACCGTTGATGAACACAGTAAAGGgaaatattactgtattctGACCAAAGAAGGAAGTGTAGAAACTGTTAagagacacacacttactgTCGCTTCAAATTCACACACTGAAAAATCAAAAGCTTTTCTCATTTACAGACAAAGCTCCAGTAACAGTGAAGTATTACTGATCTGTAAATCTAGAAAGGTATATGAGAACTTGAAGTGGACCTGGGCACCGAGGCCTGATTCACAGATTGATCTGATAGCttttaaacacagaaaacaagttcAGTTAAAAGGACCAATTAAACCGGGGAGACGTTCTTCAAAGGAATACGACAGTCAAGCTTTGATCTTTCACGTCTCACCTGTGAAGTTCAATTACAGTGGGACATACAGGTGTATTACAGAAACAACCACCTACACAACAATCATACTACACACCATCAGAGTGTCAGTGGAGCCCTCTGATGGTGTGTTGATGAATCAGTCAGTGGTTTTTACCTGTCAGCTTTCTGAAGTAACTGGTTCAGTGACGCTGGTCTGGCTCAGGATGGAGGGAAACAGAGGAGTGCTGGTCAAACAGCAAATGatgactaaaaaaaacaaaaatttacaaCTCACAGTAAATGTCTCCAGCTATGAAACAGACCTGATGAACTGGCAGTGTGCAGTTTTTACAGAGAATACACTCAGAGCTCTGGCCCCTGTGACCAACTACAGTCTTACCTCAACAACTACAAATGAACCAGACATATCAACAGAAACCTCAACTGGAACAAACAAAGCAATCAACAAACATGCAAAGACAGCAGCATCTACTGTTTTGGCTCTGTTTATTGTGACTCTGCTTGGAACTCTGTTGTATTACTGCTACAAGAAACGAGTGTCAAGTACAAAAAATACCATCTGTCATTCATTTTTGtcctttaataatattttcacaggGAATGCTTTTTATTCATCCTTACATACTTATTCTTGCTATATTTGCATCATTTCAGTGTACTCTGACCCTCAGGAGTCTGAACCAGTCTACATTAACATCAGCCAAATGAGGATCGAAAGAGCACAGTGTAGCAACAGAGAAAGTCCTGAAATATACCGCAATATAAGACGGAACAGATATGgaaaaacaaacataaataaaagagaTGAGACTACAGTTACCTCAGACAGTGTAACATACGCAACCATTTCTTTCAACAAACCCAGTTTCCAGACTTAGACATAACTCCCCAACAGCATTATGAAAACCTGAAGATAAGAGAATGTTGTCATTTGGTTATATGTCGTGTTTTATTTAAGCTTCGTGAACCTCAAACTATTGTCTCATGGAGAACgcgtaacattttttttattaaacagcaGATGGCGCTGTCTGATTACATAGGCTTTCACCTGAGCAGGTTTAGGAGTGTGATCAAATACTGCCTTCAGTAAACCACCACGAATATTAATCTGATAAAAAGTGGATAATTGCGTCCCTCAGCTAACGTTGTTTTAGTGACTTGTACAAACTAACGTGAATATTATTATGACTTTCGTTGCGATATTTTAGCTGCTTTCATGTAAGTGCAAGTATGCTGGTGAAACGGCCATTTGATGGCACTGTTTGAAAACAtacttgaaatataataataataaaaaagtgtaagtacaaaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC107733623

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249480.1 False 2061 mRNA 0.39 8 10846287 10849801
XM_043249482.1 False 1945 mRNA 0.40 9 10846291 10849800
XM_043249483.1 True 2596 mRNA 0.37 7 10842440 10849801

Neighbor

gene id symbol gene type direction distance location
LOC122352014 LOC107733623 coding upstream 2753 10836088 ~ 10839687 (+)
ramp1 ramp1,zgc:91818,LOC107733653,LOC107738500,LOC100007315 coding upstream 61187 10757241 ~ 10781253 (+)
epb41l5 LOC107733640,LOC107663871,LOC107738499,LOC107551945 coding upstream 86555 10729162 ~ 10755885 (+)
ptpn4a LOC107733639,LOC107738498,LOC107700215,LOC107551944,LOC107663857 coding upstream 114352 10689848 ~ 10728088 (+)
tmem177 LOC107663823,LOC107738527,LOC107700213,LOC107579880,LOC107577552,LOC107600419 coding upstream 153652 10687317 ~ 10688788 (+)
klf7b klf7b,klf7,LOC107738504,LOC107598162,LOC107733646,LOC107700220,LOC107663863,LOC107551946 coding downstream 104391 10954192 ~ 10996056 (+)
ccnyl1 ccnyl1,LOC107733650,LOC107663902,LOC107698526,LOC107738507 coding downstream 181647 11031448 ~ 11040958 (+)
kcnh3 kcnh3,LOC107663882,LOC107733652,LOC107551953,LOC107598168,LOC107738522,LOC107698521,LOC108430476,LOC108266388,LOC105016302 coding downstream 249243 11099044 ~ 11192927 (+)
dbr1 dbr1,LOC107733644,LOC107738510,LOC107663903,LOC107598170,LOC107698529,LOC107551939 coding downstream 356036 11205837 ~ 11209581 (+)
tbccd1 tbccd1,LOC107551957,LOC107663868,LOC107733647,LOC107738513,LOC107698532,LOC107598171 coding downstream 367331 11217132 ~ 11222171 (+)
G69340 LOC107733630,LOC107551942,LOC107663909 non-coding upstream 7758 10833788 ~ 10834682 (+)
LOC122351147 NA non-coding upstream 27821 10803860 ~ 10814619 (+)
G69286 NA non-coding upstream 55978 10786176 ~ 10786462 (+)
G69285 NA non-coding upstream 57841 10784362 ~ 10784599 (+)
G69284 NA non-coding upstream 58738 10783465 ~ 10783702 (+)
G69355 NA non-coding downstream 73348 10923149 ~ 10923477 (+)
G69358 NA non-coding downstream 91507 10941308 ~ 10941524 (+)
G69403 NA non-coding downstream 213800 11063601 ~ 11090434 (+)
G69417 armc8,LOC107733643,LOC107663904,LOC107551954 non-coding downstream 350850 11200651 ~ 11201165 (+)
G69459 NA non-coding downstream 395350 11245151 ~ 11245478 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other upstream 447210 10328731 ~ 10395230 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other upstream 667657 10167336 ~ 10174783 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other upstream 729084 10092350 ~ 10113356 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 1275443 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 1681619 9156045 ~ 9160821 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other downstream 171935 11021736 ~ 11030409 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 615803 11465604 ~ 11490149 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other downstream 1196698 12046499 ~ 12155804 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other downstream 1585187 12434988 ~ 12452365 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other downstream 1777734 12627535 ~ 12629535 (+)

Expression


Co-expression Network