LOC122352014 (LOC107733623)


Basic Information

Item Value
gene id LOC122352014
gene name LOC107733623
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 10836088 ~ 10839687 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249484.1
TCAAATAATAGGCTATTGTCAGAACTGTCATATTGAACGAGTCACAATTGTGTGCGTAGACAAATGAATACACAAAAAAGGAACATTGTCTGTTATGTATTGTAAAGAATGTTTTCTTCCTTTTTGAACTGTATAAGCAATGCAATTCCAGCTGCAGGTCCAGATGTGCTGAAAATTTGTTTGCTAAAACATTACCAGAAGCAGTCGTCGAGCGGTGACAATTACTCAATGAGCGATACTTCATCTTCCTCCCAGAAATAAGACTGAATACAACAACATGCGTATCATctctgtttttataataatgttaagaAGTGGGTTTTGTCACAAATCTGGAGATGTAAACCTTTCTAAAGTCCAGCGTGGATCTGATGTCTCTTTGAGATGTGACGTCCCTTTCCTGTCTGAATCCTCCACATTACACTGGGAGAAAGATGGAGAACAAACATCCAACACCACACTGATGTACAACAACTCTGCCTTCATCATCTTACACACCGTTGATGAACACAGTAAAGGGAATTATTACTGTATTCTGACCAAAGAAGGAAGTGTAGAAACTGTTAAGAGACACACACTTACTATTGCTTCAAATTCATACAATGAGAAATCAAAAGCTTTTCTCATTTACAGACAAAGCTCCAGTAACAGTGAAGTATTACTGATCTGTAAATCTAGAAAGGTATATGAGAACTTGAAGTGGACCTGGGCACCGAGGCCTGATTCACAGATTGATCTGATAGCttttaaacacagaaaacaagttcAGTTAAAAGGACCAATTAAACCGGGGAGACGTTCTTCAAAGGAATACGACAGTCAAGCTTTGATCTTTCACGTCTCACCTGTGAAGTTCAATTACAGTGGGACATACAGGTGTATTACAGAAACAACCACCTACACAACAATCATACTACACACCATCAGAGTGTCAGTGGAGCCCTCTGATGGTGTGTTGATGAATCAGTCAGTGGTTTTTACCTGTCAGCTTTCTGAAGTAACTGGTTCAGTGACGCTGGTCTGGCTCAGGATGGAGGGAAACAGAGGAGTGCTGGTCAAACAGCAAATGATGactgaaaaaaaccaaaagttACAACTCACAGTGAATGTCTCCAGCTATGAATCAGACCTGATGAACTGGCAGTGTGCAGTTTTTACAGAGAATACACTCAGAGCTCTGGCCCCTGTGACCAACTACAGTCTTACCTCAACAGCTACAAATGAACCAGACATATCAACAGAAACCTCAACTGGAACAAACAAAGAAGACAGCGTGACACAGGACAGTCATCCACAGATCGCGATCAGCGTGGCTTGTGCTGTCAGTGTGCTGATTCTGCTGGGGCTTCTAGTTTTTACATGTCAGCGAAAAACAGGTCACATCGCTGGGTTAAAATCAGAAGAAGATGAGGAGATCCATTATGCTTCAGTGACAGTGGCCGGATCTAATCAGGGAACTGACAGCtggttaaaaatgaaacaagcaAGTTCAGAGGTCTGCTGTCAAACACCTTGTTTCACAAATATCTTAGATTGTCATCCAGATTTGATGCATGGTATATATGTTTGTGCTACAGTAAGCACAATCTTATATTTCTCAATTTTCAGGCGCTGGACAGAAAATCTGAAGTCATCTACTCAGAGATTAAAGCAAAGTGAACATTGCCACTGGAAGCTTCATACATTGTATATACTTATTACTGCATATACAGCATTATTGTGGTATATTAAAGCATTAGACTATAGCAAAGTATTACATCTTCTGTGCTCTGTCTGTAAGCAAGGGGTCTCTGGGTTTCACTTGCATTGAAAACACAACTGCAACACCAACATAAACATAAAGAGATCAATATGCTCTCATACTAGAAAAAACCTCAGTGTGGTTTCATGACACGCAACTGTGTTAAAGAACGGTGAACGGTGTTTCCTGGAATGGAACAAGATAAGATGATTAAGTTTTgg
>XM_043249485.1
TCAAATAATAGGCTATTGTCAGAACTGTCATATTGAACGAGTCACAATTGTGTGCGTAGACAAATGAATACACAAAAAAGGAACATTGTCTGTTATGTATTGTAAAGAATGTTTTCTTCCTTTTTGAACTGTATAAGCAATGCAATTCCAGCTGCAGGTCCAGATGTGCTGAAAATTTGTTTGCTAAAACATTACCAGAAGCAGTCGTCGAGCGGTGACAATTACTCAATGAGCGATACTTCATCTTCCTCCCAGAAATAAGACTGAATACAACAACATGCGTATCATctctgtttttataataatgttaagaAGTGGGTTTTGTCACAAATCTGGAGATGTCCAGCGTGGATCTGATGTCTCTTTGAGATGTGACGTCCCTTTCCTGTCTGAATCCTCCACATTACACTGGGAGAAAGATGGAGAACAAACATCCAACACCACACTGATGTACAACAACTCTGCCTTCATCATCTTACACACCGTTGATGAACACAGTAAAGGGAATTATTACTGTATTCTGACCAAAGAAGGAAGTGTAGAAACTGTTAAGAGACACACACTTACTATTGCTTCAAATTCATACAATGAGAAATCAAAAGCTTTTCTCATTTACAGACAAAGCTCCAGTAACAGTGAAGTATTACTGATCTGTAAATCTAGAAAGGTATATGAGAACTTGAAGTGGACCTGGGCACCGAGGCCTGATTCACAGATTGATCTGATAGCttttaaacacagaaaacaagttcAGTTAAAAGGACCAATTAAACCGGGGAGACGTTCTTCAAAGGAATACGACAGTCAAGCTTTGATCTTTCACGTCTCACCTGTGAAGTTCAATTACAGTGGGACATACAGGTGTATTACAGAAACAACCACCTACACAACAATCATACTACACACCATCAGAGTGTCAGTGGAGCCCTCTGATGGTGTGTTGATGAATCAGTCAGTGGTTTTTACCTGTCAGCTTTCTGAAGTAACTGGTTCAGTGACGCTGGTCTGGCTCAGGATGGAGGGAAACAGAGGAGTGCTGGTCAAACAGCAAATGATGactgaaaaaaaccaaaagttACAACTCACAGTGAATGTCTCCAGCTATGAATCAGACCTGATGAACTGGCAGTGTGCAGTTTTTACAGAGAATACACTCAGAGCTCTGGCCCCTGTGACCAACTACAGTCTTACCTCAACAGCTACAAATGAACCAGACATATCAACAGAAACCTCAACTGGAACAAACAAAGAAGACAGCGTGACACAGGACAGTCATCCACAGATCGCGATCAGCGTGGCTTGTGCTGTCAGTGTGCTGATTCTGCTGGGGCTTCTAGTTTTTACATGTCAGCGAAAAACAGGTCACATCGCTGGGTTAAAATCAGAAGAAGATGAGGAGATCCATTATGCTTCAGTGACAGTGGCCGGATCTAATCAGGGAACTGACAGCtggttaaaaatgaaacaagcaAGTTCAGAGGTCTGCTGTCAAACACCTTGTTTCACAAATATCTTAGATTGTCATCCAGATTTGATGCATGGTATATATGTTTGTGCTACAGTAAGCACAATCTTATATTTCTCAATTTTCAGGCGCTGGACAGAAAATCTGAAGTCATCTACTCAGAGATTAAAGCAAAGTGAACATTGCCACTGGAAGCTTCATACATTGTATATACTTATTACTGCATATACAGCATTATTGTGGTATATTAAAGCATTAGACTATAGCAAAGTATTACATCTTCTGTGCTCTGTCTGTAAGCAAGGGGTCTCTGGGTTTCACTTGCATTGAAAACACAACTGCAACACCAACATAAACATAAAGAGATCAATATGCTCTCATACTAGAAAAAACCTCAGTGTGGTTTCATGACACGCAACTGTGTTAAAGAACGGTGAACGGTGTTTCCTGGAATGGAACAAGATAAGATGATTAAGTTTTgg
>XM_043249486.1
TCAAATAATAGGCTATTGTCAGAACTGTCATATTGAACGAGTCACAATTGTGTGCGTAGACAAATGAATACACAAAAAAGGAACATTGTCTGTTATGTATTGTAAAGAATGTTTTCTTCCTTTTTGAACTGTATAAGCAATGCAATTCCAGCTGCAGGTCCAGATGTGCTGAAAATTTGTTTGCTAAAACATTACCAGAAGCAGTCGTCGAGCGGTGACAATTACTCAATGAGCGATACTTCATCTTCCTCCCAGAAATAAGACTGAATACAACAACATGCGTATCATctctgtttttataataatgttaagaAGTGGGTTTTGTCACAAATCTGGAGATGCGTGGATCTGATGTCTCTTTGAGATGTGACGTCCCTTTCCTGTCTGAATCCTCCACATTACACTGGGAGAAAGATGGAGAACAAACATCCAACACCACACTGATGTACAACAACTCTGCCTTCATCATCTTACACACCGTTGATGAACACAGTAAAGGGAATTATTACTGTATTCTGACCAAAGAAGGAAGTGTAGAAACTGTTAAGAGACACACACTTACTATTGCTTCAAATTCATACAATGAGAAATCAAAAGCTTTTCTCATTTACAGACAAAGCTCCAGTAACAGTGAAGTATTACTGATCTGTAAATCTAGAAAGGTATATGAGAACTTGAAGTGGACCTGGGCACCGAGGCCTGATTCACAGATTGATCTGATAGCttttaaacacagaaaacaagttcAGTTAAAAGGACCAATTAAACCGGGGAGACGTTCTTCAAAGGAATACGACAGTCAAGCTTTGATCTTTCACGTCTCACCTGTGAAGTTCAATTACAGTGGGACATACAGGTGTATTACAGAAACAACCACCTACACAACAATCATACTACACACCATCAGAGTGTCAGTGGAGCCCTCTGATGGTGTGTTGATGAATCAGTCAGTGGTTTTTACCTGTCAGCTTTCTGAAGTAACTGGTTCAGTGACGCTGGTCTGGCTCAGGATGGAGGGAAACAGAGGAGTGCTGGTCAAACAGCAAATGATGactgaaaaaaaccaaaagttACAACTCACAGTGAATGTCTCCAGCTATGAATCAGACCTGATGAACTGGCAGTGTGCAGTTTTTACAGAGAATACACTCAGAGCTCTGGCCCCTGTGACCAACTACAGTCTTACCTCAACAGCTACAAATGAACCAGACATATCAACAGAAACCTCAACTGGAACAAACAAAGAAGACAGCGTGACACAGGACAGTCATCCACAGATCGCGATCAGCGTGGCTTGTGCTGTCAGTGTGCTGATTCTGCTGGGGCTTCTAGTTTTTACATGTCAGCGAAAAACAGGTCACATCGCTGGGTTAAAATCAGAAGAAGATGAGGAGATCCATTATGCTTCAGTGACAGTGGCCGGATCTAATCAGGGAACTGACAGCtggttaaaaatgaaacaagcaAGTTCAGAGGTCTGCTGTCAAACACCTTGTTTCACAAATATCTTAGATTGTCATCCAGATTTGATGCATGGTATATATGTTTGTGCTACAGTAAGCACAATCTTATATTTCTCAATTTTCAGGCGCTGGACAGAAAATCTGAAGTCATCTACTCAGAGATTAAAGCAAAGTGAACATTGCCACTGGAAGCTTCATACATTGTATATACTTATTACTGCATATACAGCATTATTGTGGTATATTAAAGCATTAGACTATAGCAAAGTATTACATCTTCTGTGCTCTGTCTGTAAGCAAGGGGTCTCTGGGTTTCACTTGCATTGAAAACACAACTGCAACACCAACATAAACATAAAGAGATCAATATGCTCTCATACTAGAAAAAACCTCAGTGTGGTTTCATGACACGCAACTGTGTTAAAGAACGGTGAACGGTGTTTCCTGGAATGGAACAAGATAAGATGATTAAGTTTTgg
>XM_043249487.1
TTGAACGAGTCACAATTGTGTGCGTAGACAAATGAATACACAAAAAAGGAACATTGTCTGTTATGTATTGTAAAGAATGTTTTCTTCCTTTTTGAACTGTATAAGCAATGCAATTCCAGCTGCAGGTCCAGATGTGCTGAAAATTTGTTTGCTAAAACATTACCAGAAGCAGTCGTCGAGCGGTGACAATTACTCAATGAGCGATACTTCATCTTCCTCCCAGAAATAAGACTGAATACAACAACATGCGTATCATctctgtttttataataatgttaagaAGTGGGTTTTGTCACAAATCTGGAGATGTAAACCTTTCTAAAGTCCAGCGTGGATCTGATGTCTCTTTGAGATGTGACGTCCCTTTCCTGTCTGAATCCTCCACATTACACTGGGAGAAAGATGGAGAACAAACATCCAACACCACACTGATGTACAACAACTCTGCCTTCATCATCTTACACACCGTTGATGAACACAGTAAAGGGAATTATTACTGTATTCTGACCAAAGAAGGAAGTGTAGAAACTGTTAAGAGACACACACTTACTATTGCTTCAAATTCATACAATGAGAAATCAAAAGCTTTTCTCATTTACAGACAAAGCTCCAGTAACAGTGAAGTATTACTGATCTGTAAATCTAGAAAGGTATATGAGAACTTGAAGTGGACCTGGGCACCGAGGCCTGATTCACAGATTGATCTGATAGCttttaaacacagaaaacaagttcAGTTAAAAGGACCAATTAAACCGGGGAGACGTTCTTCAAAGGAATACGACAGTCAAGCTTTGATCTTTCACGTCTCACCTGTGAAGTTCAATTACAGTGGGACATACAGGTGTATTACAGAAACAACCACCTACACAACAATCATACTACACACCATCAGAGTGTCAGTGGAGCCCTCTGATGGTGTGTTGATGAATCAGTCAGTGGTTTTTACCTGTCAGCTTTCTGAAGTAACTGGTTCAGTGACGCTGGTCTGGCTCAGGATGGAGGGAAACAGAGGAGTGCTGGTCAAACAGCAAATGATGactgaaaaaaaccaaaagttACAACTCACAGTGAATGTCTCCAGCTATGAATCAGACCTGATGAACTGGCAGTGTGCAGTTTTTACAGAGAATACACTCAGAGCTCTGGCCCCTGTGACCAACTACAGTCTTACCTCAACAGCTACAAATGAACCAGACATATCAACAGAAACCTCAACTGGAACAAACAAAGAAGACAGCGTGACACAGGACAGTCATCCACAGATCGCGATCAGCGTGGCTTGTGCTGTCAGTGTGCTGATTCTGCTGGGGCTTCTAGTTTTTACATGTCAGCGAAAAACAGGTCACATCGCTGGGTTAAAATCAGAAGAAGATGAGGAGATCCATTATGCTTCAGTGACAGTGGCCGGATCTAATCAGGGAACTGACAGCtggttaaaaatgaaacaagcaAGTTCAGAGGCGCTGGACAGAAAATCTGAAGTCATCTACTCAGAGATTAAAGCAAAGTGAACATTGCCACTGGAAGCTTCATACATTGTATATACTTATTACTGCATATACAGCATTATTGTGGTATATTAAAGCATTAGACTATAGCAAAGTATTACATCTTCTGTGCTCTGTCTGTAAGCAAGGGGTCTCTGGGTTTCACTTGCATTGAAAACACAACTGCAACACCAACATAAACATAAAGAGATCAATATGCTCTCATACTAGAAAAAACCTCAGTGTGGTTTCATGACACGCAACTGTGTTAAAGAACGGTGAACGGTGTTTCCTGGAATGGAACAAGATAAGATGATTAAGTTTTgg
>XM_043249488.1
TTGAACGAGTCACAATTGTGTGCGTAGACAAATGAATACACAAAAAAGGAACATTGTCTGTTATGTATTGTAAAGAATGTTTTCTTCCTTTTTGAACTGTATAAGCAATGCAATTCCAGCTGCAGGTCCAGATGTGCTGAAAATTTGTTTGCTAAAACATTACCAGAAGCAGTCGTCGAGCGGTGACAATTACTCAATGAGCGATACTTCATCTTCCTCCCAGAAATAAGACTGAATACAACAACATGCGTATCATctctgtttttataataatgttaagaAGTGGGTTTTGTCACAAATCTGGAGATGTAAACCTTTCTAAAGTCCAGCGTGGATCTGATGTCTCTTTGAGATGTGACGTCCCTTTCCTGTCTGAATCCTCCACATTACACTGGGAGAAAGATGGAGAACAAACATCCAACACCACACTGATGTACAACAACTCTGCCTTCATCATCTTACACACCGTTGATGAACACAGTAAAGGGAATTATTACTGTATTCTGACCAAAGAAGGAAGTGTAGAAACTGTTAAGAGACACACACTTACTATTGCTTCAAATTCATACAATGAGAAATCAAAAGCTTTTCTCATTTACAGACAAAGCTCCAGTAACAGTGAAGTATTACTGATCTGTAAATCTAGAAAGGTATATGAGAACTTGAAGTGGACCTGGGCACCGAGGCCTGATTCACAGATTGATCTGATAGCttttaaacacagaaaacaagttcAGTTAAAAGGACCAATTAAACCGGGGAGACGTTCTTCAAAGGAATACGACAGTCAAGCTTTGATCTTTCACGTCTCACCTGTGAAGTTCAATTACAGTGGGACATACAGGTGTATTACAGAAACAACCACCTACACAACAATCATACTACACACCATCAGAGTGTCAGTGGAGCCCTCTGATGGTGTGTTGATGAATCAGTCAGTGGTTTTTACCTGTCAGCTTTCTGAAGTAACTGGTTCAGTGACGCTGGTCTGGCTCAGGATGGAGGGAAACAGAGGAGTGCTGGTCAAACAGCAAATGATGactgaaaaaaaccaaaagttACAACTCACAGTGAATGTCTCCAGCTATGAATCAGACCTGATGAACTGGCAGTGTGCAGTTTTTACAGAGAATACACTCAGAGCTCTGGCCCCTGTGACCAACTACAGTCTTACCTCAACAGCTACAAATGAACCAGACATATCAACAGAAACCTCAACTGGAACAAACAAAGAAGACAGCGTGACACAGGACAGTCATCCACAGATCGCGATCAGCGTGGCTTGTGCTGTCAGTGTGCTGATTCTGCTGGGGCTTCTAGTTTTTACATGTCAGCGAAAAACAGGTCACATCGCTGGGTTAAAATCAGAAGAAGATGAGGAGATCCATTATGCTTCAGTGACAGTGGCCGGATCTAATCAGGGCGCTGGACAGAAAATCTGAAGTCATCTACTCAGAGATTAAAGCAAAGTGAACATTGCCACTGGAAGCTTCATACATTGTATATACTTATTACTGCATATACAGCATTATTGTGGTATATTAAAGCATTAGACTATAGCAAAGTATTACATCTTCTGTGCTCTGTCTGTAAGCAAGGGGTCTCTGGGTTTCACTTGCATTGAAAACACAACTGCAACACCAACATAAACATAAAGAGATCAATATGCTCTCATACTAGAAAAAACCTCAGTGTGGTTTCATGACACGCAACTGTGTTAAAGAACGGTGAACGGTGTTTCCTGGAATGGAACAAGATAAGATGATTAAGTTTTgg

Function

NR:

description
PREDICTED: uncharacterized protein LOC107733623

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249484.1 True 1962 mRNA 0.40 8 10836088 10839687
XM_043249485.1 False 1947 mRNA 0.40 8 10836088 10839687
XM_043249486.1 False 1942 mRNA 0.40 8 10836088 10839687
XM_043249487.1 False 1817 mRNA 0.41 9 10836120 10839687
XM_043249488.1 False 1776 mRNA 0.41 8 10836120 10839687

Neighbor

gene id symbol gene type direction distance location
ramp1 ramp1,zgc:91818,LOC107733653,LOC107738500,LOC100007315 coding upstream 54835 10757241 ~ 10781253 (+)
epb41l5 LOC107733640,LOC107663871,LOC107738499,LOC107551945 coding upstream 80203 10729162 ~ 10755885 (+)
ptpn4a LOC107733639,LOC107738498,LOC107700215,LOC107551944,LOC107663857 coding upstream 108000 10689848 ~ 10728088 (+)
tmem177 LOC107663823,LOC107738527,LOC107700213,LOC107579880,LOC107577552,LOC107600419 coding upstream 147300 10687317 ~ 10688788 (+)
pth2ra pth2r,LOC107733633,LOC107663806 coding upstream 165989 10628143 ~ 10670099 (+)
LOC122352013 LOC107733623 coding downstream 2753 10842440 ~ 10849801 (+)
klf7b klf7b,klf7,LOC107738504,LOC107598162,LOC107733646,LOC107700220,LOC107663863,LOC107551946 coding downstream 114505 10954192 ~ 10996056 (+)
ccnyl1 ccnyl1,LOC107733650,LOC107663902,LOC107698526,LOC107738507 coding downstream 191761 11031448 ~ 11040958 (+)
kcnh3 kcnh3,LOC107663882,LOC107733652,LOC107551953,LOC107598168,LOC107738522,LOC107698521,LOC108430476,LOC108266388,LOC105016302 coding downstream 259357 11099044 ~ 11192927 (+)
dbr1 dbr1,LOC107733644,LOC107738510,LOC107663903,LOC107598170,LOC107698529,LOC107551939 coding downstream 366150 11205837 ~ 11209581 (+)
G69340 LOC107733630,LOC107551942,LOC107663909 non-coding upstream 1406 10833788 ~ 10834682 (+)
LOC122351147 NA non-coding upstream 21469 10803860 ~ 10814619 (+)
G69286 NA non-coding upstream 49626 10786176 ~ 10786462 (+)
G69285 NA non-coding upstream 51489 10784362 ~ 10784599 (+)
G69284 NA non-coding upstream 52386 10783465 ~ 10783702 (+)
G69355 NA non-coding downstream 83462 10923149 ~ 10923477 (+)
G69358 NA non-coding downstream 101621 10941308 ~ 10941524 (+)
G69403 NA non-coding downstream 223914 11063601 ~ 11090434 (+)
G69417 armc8,LOC107733643,LOC107663904,LOC107551954 non-coding downstream 360964 11200651 ~ 11201165 (+)
G69459 NA non-coding downstream 405464 11245151 ~ 11245478 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other upstream 440858 10328731 ~ 10395230 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other upstream 661305 10167336 ~ 10174783 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other upstream 722732 10092350 ~ 10113356 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 1269091 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 1675267 9156045 ~ 9160821 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other downstream 182049 11021736 ~ 11030409 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 625917 11465604 ~ 11490149 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other downstream 1206812 12046499 ~ 12155804 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other downstream 1595301 12434988 ~ 12452365 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other downstream 1787848 12627535 ~ 12629535 (+)

Expression


Co-expression Network