mpp4a (mpp4a,LOC107738104,LOC107688761,LOC107752892,LOC107592993,LOC107668389)


Basic Information

Item Value
gene id mpp4a
gene name mpp4a,LOC107738104,LOC107688761,LOC107752892,LOC107592993,LOC107668389
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 8064653 ~ 8074446 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249500.1
ATGCGTCAATCGATGGAGGAGGATCCAGTGATGCAACCTGGGCATGATGACAATGATGTAGGTTTAGCTCAGATCTTGACAGAAGTGGTTGAAGAAGTGAGACTGTCCATTGACAGAGACATTAACGGTGCCGATCTTCTGTACAGTCTCCTCAGTGCTCCTTGGCTTTACTCTCTTCTCAAGGTATATGAGTGTTTGGTGCAGCACAGTCGAGATGCCCCAAGCCCGTGTCTGTCTTATTCCTCGAGACTATCTCAGGAGATTATGTCCAGTGTGCGAGGACTGCCTGCTCCCTCCTCTGAGGCACAAGAACTTTATATTCTGCTAAAAAGCCCTCATATGCAGGCTTTGCTCTCTGCTCATGATTCTGTGGCCCAGAGGGGCTACGGTCCAGTGCTGCCTCCACTTCCAGACAAACTGCCTGACAATGAGGAGGCCATGAGGATTGTTTGCCTTGTGAAGAATAAACAGCCTCTGGGGGCAACtattatgaaaaatgaaaaaacaggGAATATCTTTATTGCAAGGGTGATACATGGAGGACTGGCAGATCGTAGTGGACTTCTTTATCCTGGCGACAAGCTGCTGGAAGTGAATGGACAGAAAGTGCGGGGACTGCAGCCCGAGCACGTCATTAAGATGCTGGTGCGATCTCaaggaaatattatttttaaagtgatcCCTAATACACCACAACTCACCAGCAGCCAACCAGCCCTGTATGTGAGAGCCATGGTGGATTACAGTCCTCTGCAGGACCCTGCGATCCCCTGCCCAGATGCAGGCATGGCCTTCAGTAAAGGAGACTTGCTGAAGATTGTCGACCAGAGGGACATCCGATGGTGGCAGGCCAGGAAACTCTACAGTGCCTCATTGTGTTGTGGCCTCATCCCCTCCACTAACCAGTTCAAATATAAGCAAAGGGAGTTGTGGTGGTCCCAACCTTATCAGGCTCATACCTGCATCAGACCCTTGAGTGCAACAGATGTTGGAGAAGAGGAGATAGCAGATGAGAACAAGTGCATTGAAACAGATGAAGAAGATTTTGAGTTCGTGTCAGAGGAGGGTGAGAATGGTGAACATATGCAGGGATTATATATAGCGGGATTCCGACACAGTCTGCGTGTGTGGAGAAGGAAATCATACAGCAGACGAAAGCCATCATGTTATTCCTGTGGTGTCAGCAGCTGCCATAACACAGCTACCCTCTATGAAGAGGTGATCCACTACCAGCGCCACATAGACGATCCCCCTCGTCTCATTGTGCTCATTGGGCCATCAGGAGTTGGTGTAAATGAACTACGCAGGAGGCTAATCAAAATCAACCCTAATACGTACCAAGGACCGATATCTTACACAACACGGTCCCAGAAAATGGGTGAGAAGAATGGGCGCGAATATCACTTTGTGACCAAGGAAGTGTTTGCGTACATGGTGGTTAATCACAAATTTCTTGAGTATGGAGAGCATAATGGACACATGTACGGCACCAGCTTAGACTCGGTCCAGGATGTTTTGGACAATGGGAAAATATGTGTTATTGACCTCGAACCTCATTGCATTCATTCAGTCAGAAACAAGAAGCTGAAGCCCTATATCATATATGTGCGGCCTCCGTCTCCTGCCCGCATGAAGCAAACAAGAAAAGACCCACATTTTCTTTCCAATAGATACATCAAGAGATACTTTTATgaCAAAGACTTTGAGGAGATAGAGGAAGCAAGCAGGACTATGGAGACCAAGTACCGTCAGTATTTTGACTGTGTGATTGTGAACGATGATCTGCAAGATTCATGCATGGATCTGTTCACAGCTATACAACATGCTCAAGAAGAACCACAGTGGATTCCTACCAGCTGGTTTGCTCCCGATCATCCATGATGCACAGACGTCCATAACAACAAACAAGGGAATTTTTGAATGGTTGTAATTAATCTCAAAGAACTGAAccttgaaaaaaacaaatgcctTTGTTTGTAGTTTaggaaaaaatactttcatGTGAGCCCCTGAGTAAAATCCTATTTGTGCAATTACTTTGTCACCAGCAGTTGTCTGGATTATCattttacatacagtacatattacatatactgTAAGCACATATTTAGG

Function

symbol description
mpp4a Orthologous to human MPP4 (membrane palmitoylated protein 4).

NR:

description
PREDICTED: MAGUK p55 subfamily member 4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249500.1 True 2112 mRNA 0.46 20 8064653 8074446

Neighbor

gene id symbol gene type direction distance location
tmem237a tmem237a,LOC107738107,LOC107668390,LOC107752911 coding downstream 1558 8056543 ~ 8063095 (-)
abi2a abi2,abi2a,LOC107738105,LOC107752895,LOC107592995,LOC103029249,LOC108423993,LOC107688767 coding downstream 9485 8026229 ~ 8055168 (-)
LOC122352095 LOC107688783,LOC107738103,LOC107596557 coding downstream 107315 7955089 ~ 7957338 (-)
si:ch211-67e16.3 NA coding downstream 112371 7948380 ~ 7952282 (-)
si:ch211-67e16.4 LOC107596547,LOC107738112,LOC107668355,LOC107688758,LOC107752914,LOC107592999 coding downstream 116848 7938052 ~ 7947805 (-)
LOC122351474 LOC107600885,LOC107659206 coding upstream 129834 8204280 ~ 8209919 (-)
carf carf,LOC107751498 coding upstream 138342 8212788 ~ 8222003 (-)
fam117bb fam117bb,fam117b,LOC107751499,LOC107752888,LOC107596526,LOC107668400,LOC107677778 coding upstream 149255 8223701 ~ 8257719 (-)
bmpr2b bmpr2,bmpr2b,LOC107668372,LOC107593012 coding upstream 183497 8257943 ~ 8316394 (-)
si:dkey-230p4.1 LOC107677784,LOC107596544,LOC107749895 coding upstream 242517 8316963 ~ 8334613 (-)
G68554 nrp2b,LOC107596550,LOC107716756,LOC107688751,LOC107593002,LOC107752901 non-coding downstream 242764 7820008 ~ 7821889 (-)
G68555 nrp2b,LOC107688766,LOC107688751,LOC107752901 non-coding downstream 245821 7815249 ~ 7818832 (-)
G68489 NA non-coding downstream 683145 7381290 ~ 7381508 (-)
G68473 NA non-coding downstream 723159 7327829 ~ 7341494 (-)
LOC122352164 NA non-coding downstream 1029292 6982678 ~ 7035361 (-)
LOC122352023 NA non-coding upstream 396417 8470863 ~ 8474578 (-)
G68822 NA non-coding upstream 687325 8761771 ~ 8835225 (-)
G68826 NA non-coding upstream 719415 8793861 ~ 8801749 (-)
G68830 NA non-coding upstream 727939 8802385 ~ 8805405 (-)
G68839 NA non-coding upstream 742074 8816520 ~ 8817618 (-)
LOC122351623 raph1,LOC107592998,LOC107668371,LOC107752894,LOC107738113,LOC107688760,LOC107738116,LOC107596536 other downstream 39981 8014449 ~ 8024672 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other downstream 910699 7070985 ~ 7153954 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other downstream 1803584 6246900 ~ 6261069 (-)
LOC122351979 NA other downstream 1964741 6099071 ~ 6099912 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other downstream 2020728 6043275 ~ 6043925 (-)
als2a als2a,LOC107688763,LOC107596546,LOC107668398,LOC107752891,LOC107592992,LOC107738114 other upstream 2022 8076468 ~ 8094847 (-)
LOC122351483 LOC107663814,LOC107733620,LOC107555196,LOC107720141,LOC107600416,LOC107655476 other upstream 1833742 9908188 ~ 9910178 (-)
trim13 trim13,LOC107720128,LOC107555217,LOC107663864,LOC107706093,LOC107600394,LOC107655513 other upstream 2359061 10433507 ~ 10443619 (-)
fdx1 fdx1,LOC107663820,LOC107706088,LOC107720152,LOC107655504,LOC107600437,LOC107555213,LOC107655505 other upstream 2440826 10515272 ~ 10519457 (-)
mrasa LOC107551943,LOC107663912,LOC107733654,LOC107600440,LOC107738526 other upstream 2605712 10680158 ~ 10686627 (-)

Expression


Co-expression Network