mmadhcb (LOC107555358,LOC107723693,LOC107725215,LOC107555052,LOC107658219)


Basic Information

Item Value
gene id mmadhcb
gene name LOC107555358,LOC107723693,LOC107725215,LOC107555052,LOC107658219
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13760324 ~ 13765326 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249524.1
CGGACGTTCTTGTGTTTGTCCTTTACACGCTGCCGTCGTTACGTAATCAAAGGTTAAACAAGACTAGCTTTTAGCAAGCTAACAGCTTACGTCAATCTCACAAAATTCAGGTACACCGTAAACAAGAGAAGCCCAACAGGATGACCAGTGTGCTCTGCAGCAGAGCTCGGCTGGTGTCATACCTGCCAGGGCTTCACGTTCTAGTTCATCGTGTCGTTGGAGCCAGGACCTTCTCCGGGGCCCCAGGCTCAGACGAGCCACACTTTCACAGCAGTACCCCTGACACTGCACAAAGGACAGTGTGGCCAGATGAGACCATGGGCCCGTTCGGACCTCAGGATAAGCGTTTCCAGTTGCCGGGTAACATGGGTTTCGACTGTCATTTGGAGGGTCCAGCGGAGCAGAGGACCTCACCGATCCGCAGCTCCATGCCAGACGTGCTCACTGCTCAGTCCAGCAGCGAAAGACACAACTTCATCCTGGCCCATTTCATCCACGAGCTTCATgaaagTGACAAAGCATCCACAGAACAGAACTTGGATAAAGAAGAGCACTTTTTTGATCATTCCAGTGTGGAGTGTGCCATTCAGTCCTGCCCAGAATTGTTAAAGAAAGATTTTGAGTCCATGTTCCCCGAGGCCCCGTCAACCGGCATGATGGTGGTCACAGTgactcagaaaacacagaacGACATGACGGCCTGGACTGAGCAAGTggaccaggagagagaagaGCTGCTTGCTAAATTCGTTGAAGGTGCAAAGGAGATATGCCATGCTCTCCGAACGGAAGGATTCTGGGCTGATTTCATAGACCCATCGTCTGGACTTGAGTTCTTCGGTTCATACACGAACAACACGCTCTTTGAAACGGATGAAAGGTATCGTCATTTAGGTTTTCAGATCGAGGACCTGGGCTGTTGTAAAGTGATTCGGCACGTCATGTGGGGGGCGCATGTTTTTGTGGGCACGCTTTTCACAACGGCGCCATCCGACAGCCAGATCATGAAGAAGCTACAAGGGAACTAAAGCGAATTAGTTAAAGATGCTGAGTCGGCTTGGGAACACTATTAATATCAAAACCAAACCTCACTTTTGAGATGACTAGCACAATCAGAACACGCTTATATCCCATAATGCACTTAGTGAAGTTGCCCAATGGCTGCTGCTGGAAATgtggatttatttttgtacatcagAAAACACTTTTGGCGTgactttaattttcttttcctGTACGATGCCTTTCTTCTACTACAGACCTCAAAGCAACTAAAATGTGACTGTTGCTCTATTCAAATGtgtatttggtcatttttttgtccgtgtgttataattaaaaagtgttAGTAGTGATTAAAAGCTTATAAGTTTAATTTGTAGGATTGTCAGATATCTCCATAGCTTTATGATAggcacaataaataattaaggagTCTCACTGGCTGTAATGTTGGTTTATTGTTCGTGTGAACAGTTTGGACCTGATGACCTTCACGTAAAACCATCCATTAATCTGAATGCTTGAGCTAGCATTGTGTAAGGCCTTTATCACTCAGTAGTGACTTTCTTTTCAAGTGAGTAGACTTGGCACATTAAAGCAGAGTTAGTATAactgacattttattaatactcTTGTGCATGAAGTAGACGCTTACTGTTTCTTCAATATCAGGTGCTTGGAGTGTGGACTACTGATAAATTAATtgtactgcaaaaacacattatttctGTTATTCATTATATAACTAATGTTAAAACGTACGAGTATCAGTAACTGTCTGGTTTTAGTCTTTAACCTGTACGGTGGATGTTTTTTGGCATTATTAGCCTGAAGCGATCAAAGCCGACAGCTGCCGTTGTCAATGTCTCACGGGGGTCTTTAGAATTCATTCAGACGCACAGCAGATGGACTATAATCATTCTTCTTTAAACTCTGACACTATCATTATTGCAGACAGTTCTTCACTCTCCATTAGTACGTGCCCGTCAGTGAGTTGTGCTTTTCAATCAAATGGCCCTTACGGCTGATCTCTCCTTGACGGAaagtcacaaaacaaaaaccgtaaaggttcatttatttaaatccttTGCATTATGTTAGATGAAATAGCTTCTCGGTCGTTcgtaaaagcacattaaatcCATATATACTGTCTCTTCCTGCAGTAACCGGCATCTGATCTCGTTTAAGACATTAATGCGGTTGATCAAAGGGCAGTGTGTGGATGGTGACGTGTTTTAGAGACAGCAGTCATCACCCCGTGCCTGTCTGATTGACACGGCTATCAATTAGATGTAATTGTCCTGCTAAAACTTGCTTCCTTCTCTGTGTTTGTCGGTTAAGTTTACTATTTAACTGTTTCACTGAACTCGAACCGTCAGGCCAAGCAACTAATTAACAACATGATTACTATGTCAGCTTGTCTTTTTATCATTCTGAAAGAACGgtgtttaaatttataaataaactttgtgTTGTGAGGAGGA

Function

NR:

description
PREDICTED: methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X2

GO:

id name namespace
GO:0009235 cobalamin metabolic process biological_process
GO:0005739 mitochondrion cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249524.1 True 2489 mRNA 0.43 8 13760324 13765326

Neighbor

gene id symbol gene type direction distance location
LOC122351432 LOC107723646,LOC107684057,LOC107555330,LOC107577428 coding downstream 66137 13684985 ~ 13694187 (-)
cntnap5a cntnap5a,LOC107723682,LOC107567780,LOC107684760,LOC107658203,LOC107725209,LOC108425961 coding downstream 185370 13515688 ~ 13574954 (-)
LOC122351673 tas2r60,LOC107686069,LOC107567768,LOC107658204,LOC107555019,LOC107723647 coding downstream 244840 13513602 ~ 13515484 (-)
faima faima,faim,LOC107723686,LOC107686598,LOC107725233,LOC107695570,LOC108266416 coding downstream 305474 13449870 ~ 13454850 (-)
parp14rs1 si:ch211-219a4.3,LOC107725230,LOC107695575,LOC107555066,LOC107555021,LOC107579587,LOC107754848 coding downstream 316152 13433965 ~ 13444172 (-)
si:dkey-91i10.3 si:dkey-91i10.3,LOC107658292,LOC107723676,LOC107725254,LOC107555356,LOC107683415,LOC107555015 coding upstream 12300 13777626 ~ 13783452 (-)
eaf2 eaf2,LOC107683512,LOC107725251,LOC107723678,LOC107658291,LOC108261038 coding upstream 18459 13783785 ~ 13787128 (-)
tsn tsn,LOC107555354,LOC107686515,LOC107555051,LOC107658218,LOC107725218 coding upstream 56073 13821399 ~ 13823785 (-)
tnfaip6 tnfaip6,LOC107723653,LOC107658287,LOC107677671,LOC107555349,LOC107725226 coding upstream 148548 13913874 ~ 13921597 (-)
itgb5 itgb5,LOC107723672,LOC107725247,LOC107658201 coding upstream 160587 13925913 ~ 13961097 (-)
G70033 NA non-coding downstream 78185 13679380 ~ 13682139 (-)
G70027 NA non-coding downstream 84810 13674718 ~ 13675514 (-)
G69953 NA non-coding downstream 347885 13411812 ~ 13412439 (-)
G69888 col6a3,LOC107670696,LOC107567775,LOC107739950 non-coding downstream 432911 13302403 ~ 13327413 (-)
G70263 LOC107723691,LOC107555352,LOC107725250,LOC107555050 non-coding upstream 50385 13815711 ~ 13816743 (-)
G70271 NA non-coding upstream 69920 13835246 ~ 13835699 (-)
G70272 NA non-coding upstream 71984 13837310 ~ 13837600 (-)
G70290 LOC107658288 non-coding upstream 93670 13858996 ~ 13859401 (-)
G70288 neb,LOC107658288,LOC107723644,LOC107678501 non-coding upstream 94457 13859783 ~ 13866148 (-)
tmem163a tmem163a,LOC107658221,LOC107725256,LOC107684456,LOC107555363,LOC106586306,LOC106582396 other downstream 86517 13642303 ~ 13673807 (-)
gypc gypc,LOC107723681,LOC107725252,LOC107555063,LOC107567781,LOC107684853,LOC107695565 other downstream 264657 13473135 ~ 13495667 (-)
G69757 NA other downstream 774346 12985124 ~ 12985978 (-)
LOC122352189 NA other downstream 1022153 12738044 ~ 12738171 (-)
LOC122351186 adcy5,LOC107555914,LOC107660638,LOC107596066,LOC107661140,LOC106586396,LOC107745452,LOC107668560,LOC107695824,LOC107716189,LOC107568450,LOC108433131 other downstream 1039634 12707976 ~ 12720690 (-)
G70261 LOC107682829,LOC107723691,LOC107555352,LOC107658202,LOC107555050 other upstream 42496 13807822 ~ 13813327 (-)
rif1 LOC107658288,LOC107555351,LOC107658286,LOC107725242,LOC107680950 other upstream 114244 13879570 ~ 13912943 (-)
G70294 NA other upstream 172933 13938259 ~ 13939868 (-)
G70317 NA other upstream 431153 14196479 ~ 14253776 (-)
LOC122351495 NA other upstream 594320 14359646 ~ 14372674 (-)

Expression


Co-expression Network