arhgap15 (arhgap15,LOC107673132,LOC107709415,LOC107555858,LOC107563181,LOC107711394,LOC107675340)


Basic Information

Item Value
gene id arhgap15
gene name arhgap15,LOC107673132,LOC107709415,LOC107555858,LOC107563181,LOC107711394,LOC107675340
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12046474 ~ 12086508 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249531.1
AGAAGCCTCATGCATGCACTAATGCTCGCACTTCTTCGAGAGACGTAGAGTTTGTGTCCCATGTGACTTGTACACTTCCTCCAAACGAtactttctctctgtctttgctGAAACAGGTTTTGAgcagttttttaacattttggaaTACGACAGAGAACCAGtatcaCAGCGATGCAGAAGCAGCCAGCAATGGTGCTTCCTGGAGCCGTTCAGATGAGAATAAAGAACTCTCAAAGCAGCTCCGGAGAGAGACTCAGCCAGACAAAGTCTATGGTCCTACCAGAACCTGACACACTACAGAAACCTATGAACCGTCACCGGAGGAACCAGTCTCAGCATAACGTTGAAGGCTCTGTCGGGCTGCAGACTATTTTAAAAGGAGAATATCTGAACAAAGCCAAAATTTCTGAAGGAGGAAAGAAATTACGGAAAAACTGGACTTCAACCTGGGTTGTTCTTTGCTCCAATCAGCTGTTGTTCTATAAAGAGAGCAAACAAGAAGCCACATAAAATTTGAAACCAGGTGGTAAACCAGATGGTGTGGATCTGTGTGGGGCTATAATCGAGTGGACAACAGAGAAATCCAGTCGAAAAAACGTGATTCAGATAACCACCTCAAATGGTCATGAGTTTTTGCTGCAGGCGGATCACTTTCCAACCATCTCTAAATGGCACGATGCCATCAAGAAAGCAGCGGACAGTCTGTCGAGTGGAGCTGGAGGCCAGAGCTGTGGTAGAGCAGCCCTTCACAGGTCCAACAGCATAGAATGCTTGTCCAGACCAACCTGTGAACCCACCAAACCTAAATCGAAAGAGACCAAATCTGAACACAGACGCTCCATCATGTTCAAGCTGAATTACAGCGCCTCAGACAGCGCCGACAAGAATGGAGTTAAGAACAGACTGAAGAAGTTCATCTCCAGACGGCCCTCCATGAAAACGCTACAGGAGAAAGGCCTTATTAAAGACAGAGTGTTTGGATCTCACATGCTGACCCTGTGTCAGAGAGAAACGACCACAGTGCCCAAATTTGTGAAGTTGTGTGTTGAGGAAGTAGAAAAGCGAGGCCTGGAGGCTGATGGGATATACAGGGTGAGCGGCAATCTGGCCATCATCCAGAAACTACGCTTCCTAGTTGACCAAGAGGAGGAGCTTGACTTGGGCGACAGCCAATGGGAGGACATCCATGTCATCACCGGAGcgctaaagatgtttttccGTGAACTGCCAGAGCCCCTGTTTCCCTTTCGTTTTTTCGACTTGTTTGTGGAAGCCATCAAAATTAAGGAGCCCACACAGAAGGTTcaagccttaaagaaactgATCCATCCTCCCAAACCCAACCACAACACCATGAAACTGCTCTTCCATCACCTGAGGAGagTCTTGAtgaaatcaaagaaaaacttGATGTCGACTCAGGGCATCAGCATTGTGTTTGGACCGACTCTCATGTGGCCCGAGTTTGAATCCGGGAACATGGAAGTCAATATGGTGTATCAGAATCAAATAGTGGAGTCCATTCTCATCGAATGTGTGGAGATCTTTGGAGCGGAGGGCATGTAAAGTCAGCCCAGAATATTCTGGAAATaagaaactgaaaatgaaaaaaaaaagaatgtgtgtttgtgtgtgtgctggctggatgttacaatGATGTAAAATTGTTGTTTCtgattttttcatatttgcttcttggaaaaaaaaaaaaaaaaaggttcacataaaaataaaaagccacatttagaattttatatataaactggcatataattatatttttgtataatacaaCCTCACATCGAATCCTACCTCAAAACATCATTGGCAAAATTGATGTCTTGGTCTTTTGTGAGTGGGGTTTTTTGTAAATGGGTTTTGTACACTGATATTTTCTGATAGATAATGTTAGTTAGAAAAACTGGCTGTAAGTGATTtctggcagtttttttttttagtcaaacTTTTATTTGGCAGAAACCCGAGATAGCAAACTAGTGATTATTTCCTGGCAGCACATACTTGCAGTCTGTTGCAACAGGTATTTgctttgtattgtgttgtgaTGCATTTGATTAATGGTAgatgtacatttgttatatttcttttttatttttaagcaaattttgtaaaattattctgtttttgaaaaaagtaaaaatgatatGCCAAATTTCATACTA

Function

symbol description
arhgap15 Predicted to enable GTPase activator activity. Predicted to be involved in regulation of GTPase activity. Predicted to act upstream of or within signal transduction. Predicted to be active in cytoplasm. Orthologous to human ARHGAP15 (Rho GTPase activating protein 15).

NR:

description
PREDICTED: rho GTPase-activating protein 15

GO:

id name namespace
GO:0043547 positive regulation of GTPase activity biological_process
GO:0007165 signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005096 GTPase activator activity molecular_function
GO:0005543 phospholipid binding molecular_function

KEGG:

id description
K20637 ARHGAP15; Rho GTPase-activating protein 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249531.1 True 2183 mRNA 0.42 16 12046474 12086508

Neighbor

gene id symbol gene type direction distance location
nepro si:dkey-22a1.3,LOC107733637 coding upstream 660480 11382392 ~ 11385994 (+)
tex30 tex30,LOC107663828,LOC107567637 coding upstream 664522 11379870 ~ 11381952 (+)
poglut2 kdelc1,LOC107567637,LOC107733631,LOC107675345 coding upstream 667052 11372926 ~ 11379422 (+)
stxbp5l stxbp5l,LOC107738516,LOC107663865,LOC107675353 coding upstream 673903 11263726 ~ 11372571 (+)
gtf2e1 gtf2e1,LOC107733656,LOC107738514 coding upstream 802044 11232007 ~ 11244430 (+)
LOC122351360 arhgap15,LOC107673132,LOC107709415,LOC107555858,LOC107563181,LOC107711394,LOC107675340 coding downstream 35723 12122231 ~ 12155973 (+)
acvr2aa LOC107709421,LOC107673126,LOC107675352,LOC107601072 coding downstream 305778 12392286 ~ 12429356 (+)
med4 med4,LOC107724027,LOC107673119,LOC107601074,LOC107709409,LOC107675337 coding downstream 366618 12453126 ~ 12456128 (+)
htr2aa htr2a,htr2aa,LOC107673120,LOC107709424,LOC107601068,LOC107724025,LOC107675342 coding downstream 395666 12482174 ~ 12507487 (+)
esd esd,LOC107675365,LOC107601075,LOC107709410,LOC107724032 coding downstream 427788 12514296 ~ 12518069 (+)
G69518 NA non-coding upstream 36552 11979781 ~ 12009922 (+)
G69483 NA non-coding upstream 623157 11420205 ~ 11423317 (+)
G69459 NA non-coding upstream 800996 11245151 ~ 11245478 (+)
G69417 armc8,LOC107733643,LOC107663904,LOC107551954 non-coding upstream 845309 11200651 ~ 11201165 (+)
G69403 NA non-coding upstream 956040 11063601 ~ 11090434 (+)
G69539 NA non-coding downstream 113426 12199934 ~ 12200597 (+)
G69578 NA non-coding downstream 235743 12322251 ~ 12322532 (+)
G69625 NA non-coding downstream 370756 12457264 ~ 12457498 (+)
G69659 LOC107709425,LOC107724026 non-coding downstream 431781 12518289 ~ 12526873 (+)
G69706 NA non-coding downstream 578504 12665012 ~ 12724840 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other upstream 556325 11465604 ~ 11490149 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other upstream 1016065 11021736 ~ 11030409 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other upstream 1651244 10328731 ~ 10395230 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other upstream 1871691 10167336 ~ 10174783 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other upstream 1933118 10092350 ~ 10113356 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other downstream 348480 12434988 ~ 12452365 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other downstream 541027 12627535 ~ 12629535 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other downstream 645790 12732298 ~ 12803408 (+)
G69755 NA other downstream 898360 12984868 ~ 12985978 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other downstream 1203185 13289693 ~ 13304591 (+)

Expression


Co-expression Network