asnsd1 (asnsd1,LOC107728934,LOC107660596,LOC107714374)


Basic Information

Item Value
gene id asnsd1
gene name asnsd1,LOC107728934,LOC107660596,LOC107714374
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19733900 ~ 19736121 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249547.1
ATGTGTGGGATCTGCTGTGTGGTCAGTTTGACCACACCACATGATCCACTGGATAAGCATGTCCATGAAAATCTCAAACACAGAGGGCCCAACTCAAGCCGGGACATTACAGAAACAATCTCAAACTGCAGTCTCCTGTTCTCTGCACACGTGCTTCACATGAGAGGTTGCCTGACACCTCAGCCTCTTCAAGATGATAATGGAAACATGCTTCTTTGGAATGGAGAGGTATTTGGTGGTCTGAGAGTCGATCTGGGAGAAAATGACACCAAAGTTGTTCTCCATCGCCTCTCAATGGCGCAGTGCGCTTCAGATGTAGTAGCTTTATTATCACAACTCAAAGGACCCTGGGCATTTATATATTACCAAAAAGTAGAGCACTGTATTTGGTTTGGGAGAGACTTTTTTGGAAGAAGAAGTCTGCTTTGGAAATTCGATCCTGAAAAGGCATCTTTCACACTTTCATCAATTGCTTCCCTACCAGTAGATGGTATTCAGTCCCAGTGGCAGGAAGTACCACCTCGTGGAGTGTACAGGTTTGACCTAACGGACTCTTCACCTCTAggaacatttatatttgaactTCATCCGTGGGTTTTCCATCGTGACGAAGAGTTAAATGAAAGCCAGGAATTGAAAAGCGAAGGTCTTCCTAGATCTGTCTCCATAAAAGCAAGTAGTTCTGGACTTTACCTGACCTCCCCAATTTGTCCAATAAACACATCCATTTCATCACTTACACCTGAACAAGATCAAAATGCTTCTCAAACCtcttttgaaaatctgaaagaaTTCCTAACAAGCTCCAAAAAGAAAGCAATGGTTAGCGCGCTCATCGACGTTCTAAGTGAGGCAGTCCGTAAGAGAGTATGGTACCTACCTGCTCAGGATGAATTAGAGATCCCCTTAAATCATACGAAAGCCGATATTGCCATTCTTTTTTCTGGGGGAATTGATTCAATGATATTAGCTGCCCTTGCTGATAGGCACATCCCTGCAGACAAACCCATTGACCTTCTTAATGTTGCCTTCAAAATCCAAGAAAAAACAGTGCCTCCCAAGTCTTTAAAGAAAGCGAAAAATAAGAAGAAAGACTGTGATGCGGATAAAATGCAATCTGTTCAACAGAGCTTTAATTGTTTTGATGTGCCAGACAGAATAACCGGTAGAGCTGGTCTGCAAGAACTAAAAAACCTCAGTCCAAATCGTCAATGGAACTTTATAGAAATTAACGTAACTCAAGATGAGCTTAAAGAAATGCGCCAGAAACGCATCTGCCATTTAGTACACCCTTTGGACACTGTTCTGGATGACAGCCTTGGATGTGCTGTCTGGTTTGCCGCCAGAGGAATTGGAGTCATAAATGAGGGCGTTGAAGAACTTTACACTTCAGAAGCAaagGTGGTTTTGACTGGCATTGGGGCAGATGAACAACTGGCGGGATACTCCAGACACAGGGTGCGTTTTAAAAACTCAGGATTAGAAGGACTCGTCAAAGAACTGGCTATGGAACTGGGGCGAATATCCTCAAGAAATCTTGGAAGGGATGACCGAATCATTGGGGACCATGGAAAAGAGGCCAGATTCCCATACTTGGATGAAGATGTAGTCAGTTTCCTTAACGGTCTACCTGTGTCTGAGAAGGCTGACTTGTCACTACCTAGAGGAGTTGGAGAAAAACTATTACTGAGGCTAGCAGCTGTTGAGTTAGGTTTGGGACTCTCTGCTCTCTTGCCCAAGAGAGCCATGCAGTTTGGTTCCAGAATAGCCAAGTTAGAGGACAACCACGAAAAAGCCTCGGATAAGTGCAAAAGGCTTGTCGCTACGTAATTTAATATTCTGACAGTTGTCTTTAAgttctgttcattttaatatgaatatactCCTTAAATGTTTGGTTTGGGGCATAGGGAATGAGTACAGTTAACCCATTTATggcaataaatcacaaaaaaaaaaattgttggccagttttattttgaatgtcatTACATGTTTGTactacattaaataaacagatgGATTTTGAA

Function

symbol description
asnsd1 Predicted to enable asparagine synthase (glutamine-hydrolyzing) activity. Predicted to act upstream of or within asparagine biosynthetic process and glutamine metabolic process. Orthologous to human ASNSD1 (asparagine synthetase domain containing 1).

NR:

description
asparagine synthetase domain-containing protein 1

GO:

id name namespace
GO:0006529 asparagine biosynthetic process biological_process
GO:0006541 glutamine metabolic process biological_process
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249547.1 True 2030 mRNA 0.42 3 19733900 19736121

Neighbor

gene id symbol gene type direction distance location
adat3 LOC107728938,LOC107714375,LOC107681677,LOC107565014,LOC107660599,LOC107602133 coding downstream 17457 19713485 ~ 19716443 (-)
pms1 pms1,LOC107602147,LOC107728929,LOC107660601,LOC107714373,LOC107565013 coding downstream 24930 19684890 ~ 19708970 (-)
pofut2 LOC107741944,LOC107660604,LOC107714363,LOC107657505,LOC107565035 coding downstream 90967 19636451 ~ 19642933 (-)
abca12 LOC107657499,LOC107714367,LOC107602131,LOC107660608,LOC107741931,LOC107565025 coding downstream 99099 19569168 ~ 19634801 (-)
bard1 LOC107741928,LOC107660605,LOC107602130 coding downstream 165140 19546224 ~ 19568760 (-)
wdr75 wdr75,LOC107660592,LOC107714378,LOC107728907,LOC107657531,LOC107602136,LOC107565028 coding upstream 14421 19750542 ~ 19766793 (-)
obsl1b obsl1b,obsl1,LOC107660652,LOC107602158,LOC107657519,LOC107728922,LOC107714352,LOC107584169,LOC108423904 coding upstream 261354 19997475 ~ 20029805 (-)
calcrla calcrla,LOC107728927,LOC107657513,LOC107602163,LOC107714396 coding upstream 512867 20248988 ~ 20270532 (-)
tfpia LOC107602164,LOC107728931,LOC107714394,LOC107660650,LOC107584163 coding upstream 535099 20271220 ~ 20295378 (-)
LOC122351553 fkbp7,LOC107562709,LOC107717008,LOC107657501,LOC107584168,LOC107714366,LOC107698996 coding upstream 665263 20401384 ~ 20403699 (-)
G71645 NA non-coding downstream 21716 19709384 ~ 19712184 (-)
LOC122351289 NA non-coding downstream 52501 19674731 ~ 19681399 (-)
G71667 cunh2orf88,LOC107728910,LOC107657540,LOC107714370,LOC798500,LOC103027948 non-coding downstream 62736 19667000 ~ 19671164 (-)
LOC122351304 NA non-coding downstream 208310 19519740 ~ 19525590 (-)
LOC122351387 NA non-coding downstream 225815 19496912 ~ 19508085 (-)
G71692 NA non-coding upstream 55126 19791247 ~ 19791560 (-)
G71727 NA non-coding upstream 151054 19887175 ~ 19941547 (-)
G71732 NA non-coding upstream 180078 19916199 ~ 19922691 (-)
G71912 LOC107602164,LOC107660650,LOC107728931 non-coding upstream 427002 20163123 ~ 20630423 (-)
G71919 LOC107728915 non-coding upstream 479299 20215420 ~ 20218047 (-)
ankar ankar,LOC107728908,LOC107660654 other downstream 2106 19719942 ~ 19731794 (-)
LOC122352185 NA other downstream 1164018 18569755 ~ 18569882 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other downstream 1367633 18251236 ~ 18366267 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other downstream 2212340 17364187 ~ 17521560 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other downstream 2478409 17235872 ~ 17255491 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other upstream 60131 19796252 ~ 19829475 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other upstream 97799 19833920 ~ 19852625 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other upstream 145429 19881550 ~ 19893315 (-)
G71938 nab1,LOC107565022 other upstream 753043 20489164 ~ 20503890 (-)
G72363 ttnb,LOC107716993,LOC107698997,LOC107657493,LOC107601612,LOC107714355,LOC108435066 other upstream 1973167 21709288 ~ 21726820 (-)

Expression


Co-expression Network