armc8 (armc8,LOC107598169,LOC107551954,LOC107733643,LOC107663904,LOC107738509)


Basic Information

Item Value
gene id armc8
gene name armc8,LOC107598169,LOC107551954,LOC107733643,LOC107663904,LOC107738509
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 11193693 ~ 11204968 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249581.1
tggaaaGTGCCGCTCTGAATGTTCCGCTGAGTGAATGATGGCGTGCCTGCTGGAGGCCCCTTTACGCATCAGCGTGTTATCTGAAGTCACAGCCACGAGTCGCCACTATGTTGACCGGCTTTTTGACCCCGACCCACAGAACGTGCTGCAGGGAGTCATTGACATGAAGAATGCTGTCATCGGAAACAACAAACAGAAGGCCAACCTGATTGTGCTCGGAGCCGTGCCAAGactccTGTATCTTCTCCAGCAGAGCTCCTCTAGCCTGGAGCTCAGGACTGAATGTGCGGTCGTGTTGGGCAGCCTGGCAATGGGCACAGAGAACAACATCAAGTCCCTGGTGGACTGTCACATCATCCCAGCCCTGCTGCAAGGTCTATTGTGTTCTGATCTGATCTTCATTGAGGCATGTCTGCGTTGTTTGAGAACCATCTTCATCAGTCCAGTCACACCAGTGCAGCTGCTCTACACTGACCCGACTGTGATCCCCCATCTCATGTCCCTACTGAGTCGGTCACAGCACACACAGGAATACATCACGCAAATCTTCGCTCACTGCTGCAAGactCCAGAACATCAGACGGTGTTGTTCAACCACGGTGCCATCCAGAACATCGCTCCTTTGCTCATCTCTCCCTCCTATAAGGTACGAATGCAGGCGTTAAAGTGTTTCTCAGTTTTGGCCTATGAGAACGCTCAGGTCTCCATGACACTGGTGAATGTGCTTGTTGATGGTGAGCAGCTCTCTCAGGTTTTTGTTAGAATGATGCAAAGGGACAAACCCATTGAAATGCAGCTTACAGCCGCCAAATGCTTAACATACATGTGTCGAGCAGGAGCCATCAGGACAGACGACAACTGTATTGTACTAAAGaCTTTGCCGTGCCTGGTACGGATGTGCAGTAAAGAGCGGTTACTCGAGGAGAGGGTGGAGGGGGCAGAGACGCTAGCCTACCTGATGGAGCCGGACATAGAGCTGCAGCGGATCGCAAGCGTCACTGACCACCTCGTGTCCATGCTGGCTGACTACTTTAAATATCCAAGCTCTGTCAGTGCCATCACTGATATTAAGAGGTTGGATCATGACTTGAAACATGCACATGAGCTGCGGCAGGCAGCCTTTAAACTCTATGCCTCTCTGGGCTCCAATGATGAAGATATCAGGAAAAagATTACAGAGACGGAAAATATGATGGACAGGATTGTTAGTGGCCTATCAGAATCTAGTATCAAAGTGCGGTTAGCAGCAGTCAGATGTCTTCACAGTTTATCACGGTCTGTACAACAGTTAAGGACAAGTTTCCATGATCATGCAGTATGGAAGCCACTAATGAAGTTATTACAGAACGCACCAGATGAGGTCCTGGTCATGGCCTCTTCAACACTATGCAACCTACTTCTGGAGTTTTCACCCAGCAAAGAACCTATCTTAGAGTCTGGGGTCATCGAGTTACTATGCAGCCTCACACAAAGTGACAGTCCAGCTCTAAGAGTCAATGGCATCTGGGCTCTTATGAACATGGCCTTCCAGGCAGATCAGAAGGTGAAGGTGGAGATAGTTCGAGCTCTGGGTACAGAACAGCTCTTTAGACTTCTGTCTGATCCTGATACTAATGTGCTCATGAAAACACTGGGACTGCTTCGAAACCTGCTCTCCACACGGCCgCATATAGACCAGATCATGAGCTCACATGGGAAGCAGATAATGCAAGCCGTCACGCTTATCCTGGAGGGAGAACACAGCATAGAGGTCAAAGAGCAGACATTGTGCATATTGGCCAATATTGCTGACGGAAATACTGCCAAGGAACTCATTATGACCAATGACGACATGctccaaaaaattaaatattacatgGGTCACTCCAATGTGAAGCTGCAGCTGGCTGCCACTTTCTGCATCTCTAACCTCATCTGGAATGAGGAGGACGGCTCACAAGAAAGACAAGACAAGCTAAGGGAGATGGGCTTTGTTGATATTTTACACAAACTCACCCAGGCATCAGATCCCAACCTCTGTGACAGgGCAAAAACGGCAATGCAGCAGTATTTGGCATGACCTCGAAGGAAGGCAGGATACGGCCTCACTAACAATCTCTAGGAGGATCGCATCTCCCgagtttttgttttagattcGAGTTTCGTTTTGctcttcctttttgttttgttgcacaAGACACCTTTTGTTGTGGAGACCCTGAACAGCTTCGTAAATCAAGAGACACGGTTTCCAGGGGGCCACAACACCTTTTGGGCTTTCAGCTACGTTTGCTTAATACGTTTTCTGCTGAACTCTTGgaactattatatttttgtttgtttgttttttggacttaatgtgaaggaaaaaaaagctccTCAAAGTGTGTTGCAGCGCCACCTGGTGGATTGAGGCTTTGACGCTTTGGACTCCCTTTGGAGAAAGCTGAACGACCTCTCAGTGCTACGCTTCTAGGAGCTTAGTCTCCTTATTTTGgtttgctgatttattattgatattattatgataacaattattattattttaattgggACTTTGACTCAAGGTTAGAAAAAGActgcttgtttttgttctttttttgtggaTACAtacctaaataaatatatataaatataaatatataaatatattttttggatttttaatttCCCTTGCAGGTTGTTTTTCCCCTTTGTATTTTCCTCTCTGTAATATAGGCTGATGTGGGTTCATCTGGAGAGGCAGCATGTTGGGTCATTTACAAAGACATTTCGTAGAAACCATCCAACCCCAAATAGAAGGTGAACGTTTGTTTGCTCTTTACACAGGTTCcttgttttctcattttcactACCTTTACCTTTACACAAATCAGTGTCCTCATAACTCCCTCTTTTCGAAGCTCTATAGTGAATGTTTCCACTCAAATATATGCAGGCCTCTGCCACGGTGCAGCCCACTGCTTTGTGTCTTTTATTCTGGGTTGGGAAGGGCATTTTAGCACAGAAGAGCTTGGAGATGAGGCACGTGCTTTAGAAATGCTGCACATGTAGGAAAAACCGGTTTGAATCCTGTCTGTGACCCTTTTCTTCCTTTAAATGATATAGTATATTTTCCTAcctaaaaaaagttacagaaaaATCAAATCAGCTTACGGAAGATGAACTCTGACAGTTATCACTTGCTTCAGACATGTTGGACCTTGGTGCTCTGCTTATATGGGAATAACTAGTTTGAATCAAGTGTGCCACACGCATCCTAAAAAGTCAAagccaaaaacattttgattggcATCTGGTGGCTGACTGTAGTACAGGTCATGTACCTGCCCTCTCGGAGTAAACAAATAAGTCGAACTAAAAATCTAATTacacttcaaataaatgtttctcaaagATGGTTTCCAtctttttaatgcttaaa
>XM_043249582.1
CTGAGTGAATGATGGCGTGCCTGCTGGAGGCCCCTTTACGCATCAGCGTGTTATCTTGACATGAAGAATGCTGTCATCGGAAACAACAAACAGAAGGCCAACCTGATTGTGCTCGGAGCCGTGCCAAGactccTGTATCTTCTCCAGCAGAGCTCCTCTAGCCTGGAGCTCAGGACTGAATGTGCGGTCGTGTTGGGCAGCCTGGCAATGGGCACAGAGAACAACATCAAGTCCCTGGTGGACTGTCACATCATCCCAGCCCTGCTGCAAGGTCTATTGTGTTCTGATCTGATCTTCATTGAGGCATGTCTGCGTTGTTTGAGAACCATCTTCATCAGTCCAGTCACACCAGTGCAGCTGCTCTACACTGACCCGACTGTGATCCCCCATCTCATGTCCCTACTGAGTCGGTCACAGCACACACAGGAATACATCACGCAAATCTTCGCTCACTGCTGCAAGactCCAGAACATCAGACGGTGTTGTTCAACCACGGTGCCATCCAGAACATCGCTCCTTTGCTCATCTCTCCCTCCTATAAGGTACGAATGCAGGCGTTAAAGTGTTTCTCAGTTTTGGCCTATGAGAACGCTCAGGTCTCCATGACACTGGTGAATGTGCTTGTTGATGGTGAGCAGCTCTCTCAGGTTTTTGTTAGAATGATGCAAAGGGACAAACCCATTGAAATGCAGCTTACAGCCGCCAAATGCTTAACATACATGTGTCGAGCAGGAGCCATCAGGACAGACGACAACTGTATTGTACTAAAGaCTTTGCCGTGCCTGGTACGGATGTGCAGTAAAGAGCGGTTACTCGAGGAGAGGGTGGAGGGGGCAGAGACGCTAGCCTACCTGATGGAGCCGGACATAGAGCTGCAGCGGATCGCAAGCGTCACTGACCACCTCGTGTCCATGCTGGCTGACTACTTTAAATATCCAAGCTCTGTCAGTGCCATCACTGATATTAAGAGGTTGGATCATGACTTGAAACATGCACATGAGCTGCGGCAGGCAGCCTTTAAACTCTATGCCTCTCTGGGCTCCAATGATGAAGATATCAGGAAAAagATTACAGAGACGGAAAATATGATGGACAGGATTGTTAGTGGCCTATCAGAATCTAGTATCAAAGTGCGGTTAGCAGCAGTCAGATGTCTTCACAGTTTATCACGGTCTGTACAACAGTTAAGGACAAGTTTCCATGATCATGCAGTATGGAAGCCACTAATGAAGTTATTACAGAACGCACCAGATGAGGTCCTGGTCATGGCCTCTTCAACACTATGCAACCTACTTCTGGAGTTTTCACCCAGCAAAGAACCTATCTTAGAGTCTGGGGTCATCGAGTTACTATGCAGCCTCACACAAAGTGACAGTCCAGCTCTAAGAGTCAATGGCATCTGGGCTCTTATGAACATGGCCTTCCAGGCAGATCAGAAGGTGAAGGTGGAGATAGTTCGAGCTCTGGGTACAGAACAGCTCTTTAGACTTCTGTCTGATCCTGATACTAATGTGCTCATGAAAACACTGGGACTGCTTCGAAACCTGCTCTCCACACGGCCgCATATAGACCAGATCATGAGCTCACATGGGAAGCAGATAATGCAAGCCGTCACGCTTATCCTGGAGGGAGAACACAGCATAGAGGTCAAAGAGCAGACATTGTGCATATTGGCCAATATTGCTGACGGAAATACTGCCAAGGAACTCATTATGACCAATGACGACATGctccaaaaaattaaatattacatgGGTCACTCCAATGTGAAGCTGCAGCTGGCTGCCACTTTCTGCATCTCTAACCTCATCTGGAATGAGGAGGACGGCTCACAAGAAAGACAAGACAAGCTAAGGGAGATGGGCTTTGTTGATATTTTACACAAACTCACCCAGGCATCAGATCCCAACCTCTGTGACAGgGCAAAAACGGCAATGCAGCAGTATTTGGCATGACCTCGAAGGAAGGCAGGATACGGCCTCACTAACAATCTCTAGGAGGATCGCATCTCCCgagtttttgttttagattcGAGTTTCGTTTTGctcttcctttttgttttgttgcacaAGACACCTTTTGTTGTGGAGACCCTGAACAGCTTCGTAAATCAAGAGACACGGTTTCCAGGGGGCCACAACACCTTTTGGGCTTTCAGCTACGTTTGCTTAATACGTTTTCTGCTGAACTCTTGgaactattatatttttgtttgtttgttttttggacttaatgtgaaggaaaaaaaagctccTCAAAGTGTGTTGCAGCGCCACCTGGTGGATTGAGGCTTTGACGCTTTGGACTCCCTTTGGAGAAAGCTGAACGACCTCTCAGTGCTACGCTTCTAGGAGCTTAGTCTCCTTATTTTGgtttgctgatttattattgatattattatgataacaattattattattttaattgggACTTTGACTCAAGGTTAGAAAAAGActgcttgtttttgttctttttttgtggaTACAtacctaaataaatatatataaatataaatatataaatatattttttggatttttaatttCCCTTGCAGGTTGTTTTTCCCCTTTGTATTTTCCTCTCTGTAATATAGGCTGATGTGGGTTCATCTGGAGAGGCAGCATGTTGGGTCATTTACAAAGACATTTCGTAGAAACCATCCAACCCCAAATAGAAGGTGAACGTTTGTTTGCTCTTTACACAGGTTCcttgttttctcattttcactACCTTTACCTTTACACAAATCAGTGTCCTCATAACTCCCTCTTTTCGAAGCTCTATAGTGAATGTTTCCACTCAAATATATGCAGGCCTCTGCCACGGTGCAGCCCACTGCTTTGTGTCTTTTATTCTGGGTTGGGAAGGGCATTTTAGCACAGAAGAGCTTGGAGATGAGGCACGTGCTTTAGAAATGCTGCACATGTAGGAAAAACCGGTTTGAATCCTGTCTGTGACCCTTTTCTTCCTTTAAATGATATAGTATATTTTCCTAcctaaaaaaagttacagaaaaATCAAATCAGCTTACGGAAGATGAACTCTGACAGTTATCACTTGCTTCAGACATGTTGGACCTTGGTGCTCTGCTTATATGGGAATAACTAGTTTGAATCAAGTGTGCCACACGCATCCTAAAAAGTCAAagccaaaaacattttgattggcATCTGGTGGCTGACTGTAGTACAGGTCATGTACCTGCCCTCTCGGAGTAAACAAATAAGTCGAACTAAAAATCTAATTacacttcaaataaatgtttctcaaagATGGTTTCCAtctttttaatgcttaaa

Function

symbol description
armc8 Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Predicted to be part of GID complex and ubiquitin ligase complex. Orthologous to human ARMC8 (armadillo repeat containing 8).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K23336 ARMC8; armadillo repeat-containing protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249581.1 True 3403 mRNA 0.45 22 11193693 11204968
XM_043249582.1 False 3300 mRNA 0.44 21 11193693 11204942

Neighbor

gene id symbol gene type direction distance location
idh1 idh1,LOC107663883,LOC107698523 coding downstream 97012 11089670 ~ 11096681 (-)
plekhm3 plekhm3,LOC107733641,LOC107551948,LOC107663884,LOC107598165,LOC107698528,LOC107738519 coding downstream 107783 11051094 ~ 11085910 (-)
fzd5 fzd5,LOC107551950,LOC107733649,LOC107698527,LOC107598163,LOC107738508 coding downstream 148231 11041292 ~ 11045462 (-)
zgc:162396 zgc:162396,LOC107551942,LOC107733630,LOC107663909,LOC107568094 coding downstream 357723 10833262 ~ 10835970 (-)
zgc:162780 zgc:162780,LOC107551941,LOC107566157,LOC107738501,LOC107733635 coding downstream 360577 10829914 ~ 10833116 (-)
rab5b rab5b,LOC107551955,LOC107738511,LOC107598172,LOC107698530,LOC108430508,LOC108266395 coding upstream 5232 11210200 ~ 11216654 (-)
lcmt2 lcmt2,LOC107663870,LOC107698535 coding upstream 20988 11225956 ~ 11231688 (-)
tlr20.4 tlr20.2,tlr20f,LOC107598181 coding upstream 181409 11386377 ~ 11389378 (-)
LOC122351856 tlr20f,tlr20.2,LOC107598181 coding upstream 187272 11392240 ~ 11396663 (-)
gtpbp8 si:rp71-84d19.3,LOC107663822,LOC107567641,LOC107738531,LOC107733632,LOC107598183 coding upstream 195583 11400551 ~ 11404296 (-)
G69396 NA non-coding downstream 163200 11029377 ~ 11030493 (-)
G69362 NA non-coding downstream 239708 10947044 ~ 10953985 (-)
LOC122351427 NA non-coding downstream 246949 10930480 ~ 10946744 (-)
G69361 NA non-coding downstream 248638 10944439 ~ 10945055 (-)
LOC122352018 NA non-coding downstream 285099 10849823 ~ 10908594 (-)
G69467 NA non-coding upstream 153982 11358950 ~ 11365819 (-)
LOC122351998 NA non-coding upstream 585813 11790781 ~ 11954234 (-)
G69596 NA non-coding upstream 880746 12085714 ~ 12156439 (-)
LOC122351183 NA non-coding upstream 1063144 12268112 ~ 12270147 (-)
G69607 NA non-coding upstream 1074825 12279793 ~ 12280197 (-)
mrasa LOC107551943,LOC107663912,LOC107733654,LOC107600440,LOC107738526 other downstream 507066 10680158 ~ 10686627 (-)
fdx1 fdx1,LOC107663820,LOC107706088,LOC107720152,LOC107655504,LOC107600437,LOC107555213,LOC107655505 other downstream 674236 10515272 ~ 10519457 (-)
trim13 trim13,LOC107720128,LOC107555217,LOC107663864,LOC107706093,LOC107600394,LOC107655513 other downstream 750074 10433507 ~ 10443619 (-)
LOC122351483 LOC107663814,LOC107733620,LOC107555196,LOC107720141,LOC107600416,LOC107655476 other downstream 1283515 9908188 ~ 9910178 (-)
als2a als2a,LOC107688763,LOC107596546,LOC107668398,LOC107752891,LOC107592992,LOC107738114 other downstream 3098846 8076468 ~ 8094847 (-)
LOC122351858 slc10a2,LOC107663831,LOC107567642,LOC107675341,LOC107738529 other upstream 191698 11396666 ~ 11493120 (-)
LOC122351308 si:rp71-84d19.3,gtpbp8,LOC107663822,LOC107567641,LOC107738531,LOC107733632,LOC107598183 other upstream 291979 11496947 ~ 11500495 (-)
gtdc1 gtdc1,LOC107709416,LOC107555857,LOC107563182,LOC107675364,LOC107673117 other upstream 886163 12091131 ~ 12194961 (-)
G69650 NA other upstream 1217461 12422429 ~ 12423446 (-)
lrch1 lrch1,LOC107709425,LOC107601076,LOC107673127,LOC107724026 other upstream 1313316 12518284 ~ 12582425 (-)

Expression


Co-expression Network