LOC122352127 (il1rapl1,LOC107756873,LOC107677935,LOC107698784)


Basic Information

Item Value
gene id LOC122352127
gene name il1rapl1,LOC107756873,LOC107677935,LOC107698784
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 9838315 ~ 9884933 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249671.1
AGAGGAAGATGACAGCTCTCAACCCAGTGCTGTTCCTGCTCTGcggtgtctctgtgtctctgacTCTGAAGGTGGTGTCAAAGAGAGGCTCAGTGGACGGCTGCACTGATTGGTCCGTGGACTATCTGAAGTACCGGGTGTTACACGGAGAGCCGGTGAGGATAAAGTGTGCTCTGTTTTACGGTTATATCAGAGCCAACTACTCCCAGGCACAGAGCATTGGACTTAGTCTGATGTGGTATCGGAGTTCTGGGTTGGGACATGGCGACTTCGAAGAACCCATCTCCTTTGACGGGGTACGCATGAGCAAAGAGGAAGACGCCATCTGGTTTCGGCCTGCCGAGCTGCAGGACGCCGGTCTGTACTCCTGTGTTCTgagGAATTCCACATTTTGTATGAAGGTGTCTATGACTCTGTTGGTTGCTGATAATGACACAGCAGGATGTTATAACTCAAAACTGCGCTACACTGAGAAAGGAGAACTGGGCAAGAGTAAAGACATCTCCTGTCCTGATATCCAGGATTACGTTCAGCCTGGAGAAAAACCGCAGATAATGTGGTACAAGGAGTGTAACGTGCAGCAGTGGAGGAGCAGCGTGCTGCAGACCGCAGACATGCTCTCTATACAGGAAGTGAACGAGGAAGACATCGGCAACTACACCTGTGAGCTGGTTTTTGGAGGCTTCCTGGTGCGGAGGACGACCTATCTGAGCGTGACAGGTAtGCTTACAGACATTCCTGTTGAAATTCTTCAGCCCTCTGAAAACAAGCTCCTCACCATGGACGTGCAGCTCGGAAGTATGCTGAACCTGACATGCCGAGCCTTCTTTGGGTACAGTGGGGACATCAGTCCACTTGTTTACTGGATGAAAGGAGAGAAGTTCATCGAGGACATGGACCAGAGTCGCATTCGAGAGAGTGAAATCAAGACTGTCAGAGAACACCTGGGTGAACAGGAAGTGTCCATTACTCTGACCATAGATTCACTGGAGGAGGTAGATCTGGGTAATTATTCCTGTTATGCAGAAAACGGCAACGGGAGAAGACAAGCCAATGTACAGATTGGGAAACGAGAACTCATGTATACGGTGGAGCTGGCTGGAGGTTTGGGAGCCATTCTGctgatgttgatatttttgGTGTCCCTGTATAAGTGTTACAGAATTGAACTCATGCTCTTCTACAGAAATCACTTTGGCAGTGAGGATGTGGATGGAGaaaataaagACTACGATGCATACGTGTCCTACACTAAAGTGGATCCAGACCAGTGGAGTCAGGAAACTAGAGAGGAGGAACGTTTTGCTTTGGAGATTCTGCCAGACGTTCTGGAAAAGCATTATGGGTATAAACTCTTCATTCCTGACAGGGACTTGATACCAACTGGAACATATATAGAGGATGTGGCTCGCTGCGTTGACCAGAGCAAGCGCCTCATCATTGTGATGACGCCCAACTATGTGGTGCGCCGTGGCTGGAGCATCTTCGAACTGGAGACACGGCTGCGCAACATGCTGGTCAGTGGCGAGATCAAAGTCATCCTCATCGAATGCGCTGAGCTGCGGGGTATCATGAACTACCAGGAGGTGGAGGCTCTCAAACATACCATCAAACTGCTGACGGTCATCAAGTGGCCGGGACCCAAGAGCAGCAAGCTTAATTCCAAGTTCTGGAAGCAGCTGCAGTATGAAATGCCCTTTAAGCGGCCCGAGCCCAAGCTGCACGAGCAGGTGCTGGACGTCAGTGAGCAGGGTCCATTTGGAGAGCTGCAGACCGTCTCCGCCATCTCTATGGCTGCGGCCACCTCCACCGCCATGGCCACCGCGCATCCTGATCTGCGTTCCACCTTCCACAACACGTACCACCATCAGCTGCGGCAGAAGCACTACTACAGGAATTACGAGTATGACATTCCCTCGTCTGGCACCCTCCCACCGCTGACCTCGATGGGCAGCCAGCACACCTACTGCAACATCCCCATGACTCTGCTTAACGGCCAGCGAGCACAGGGCAAGCCGGGCCGCGAGCAGCAGCCGACGCTGGAGGAGCAGCACGTCAACAACGCCATGCTTCCACTGCTGCCTCGCGAGACCAGCATTTCCAGCGTGATCTGGTGACGCCGCTGGGAAGGGACATTTCTGCAATTGGCACTTATTAAGACCCTTACAAACTGCTGCTGTTGACTTTGCACTGCGATTCACATGCAGGGGGCGGAAACTGAAGGGACACGACAAAGACAAGCTAACAGGGACAATGATACCACACGTACATCACGGAGATGTCTATTTGACATCTGAACGTACATCTGGAAGATCTAAATGCGTTTGACTTTTACTATTAGATGTcacaaacaatatttataagCATCTAATAGACGTCTGTGATTTAGAATGTGCGTAAAGACATCTTACAGACGTCTgtcagatgctttccagatcaaaCTATATTTAGCAGACATCTTGCAGATGTACATGTGCTATCTTAGGTTCCCCTGATGGCAAGTGTACATCACAGAGATGTCTATTTGACATCTGCATTTACATCTGGAAGACATATATTTAGTGTGTTTGTTCATCTGCAATACGTCTATATGACGTTTCCTATTAGATGTCCAATAAACACTAAAAAGACATCCTAATAAACATCTTGGATTTAGAACGTGTGTACAACTGATATCTTACAGATGTGTGTCAGATGTTTGTATACAGCAGATGCTTTTCAGATCAAGTGATCTTTATCAGACATCTTGCGGATGTATGTGTGTTATCTGGGGAGGTTCGTTCTCTCACAGACAGCTCCTTCATACTCTCTCAAGGAATACAGGGTCTTGTACATATGTTTGCGGTTTCTTTGTAGCATTGGATTTTTGGTTCTttcgttttcattttcaaatgtctGGTTTGTACTTTTCCCCTTATAAAATAACTGAGCAGAGACACGTGGGGCAGAGTAAAGGCTGAcctgttgtgtttttctcttaacTTGTAGTTTTCAAGTACAATACTTGTTTTTATAGAATTTGTGGAATtatgctgggtttttttttttagattttttttattattggtcAGTTGGTGAGATGTCTCTACTTTGATGAAAAACACCATTATGCAAATGCTCCTGAGGCCTGAAAGCTTGTCTTCTTCCCAAATGAATGAGTGAGCAGATGATGTTTAAGAGGAAAAACTAGATGTCATTACGATGCTCTAGTGTCTCTGCTGCTCTGTTTCTCTCGCTAAGCTAATGAGACTTtgttagaaaagaaataaaacacagctttgCTGTTCAGCTTGATGGGGAGAacttaaaaactgtattattatttaaaaaaaaaataatctatatttttataacaaaaggATTTGCTTGGAAAGACACACAGTAGGtcccatttaatttatttcattaatagaAGCACCGGAGCTCACCAatttctgagaagaaaaaaaactaatttttgatAATGGTCTTATCAAATCATGGATGAGCAAGCGAAAACTacttgctgtttttattttccccaCAATACCGACATTCATCTCTGAGTGTGCATAACAATTagaattaattatgcatttaatttattatataattatcgATATTTCATATCAGAAAAAGTGCTTACAATACAAATCAGTGTCTCTAAATAATTCCATGATTCGTTCTCTTCACTGCACATTAAAACCTGTTATCCTCCACTGTAGTGCCTCCTCCTGCTCCACCACAGACGTCATCCCGAGGTTAAGAGTGGTACTGCGTCTCTCAGCGTTTCTTAGGTACTGCCATGACACCGCTGCTCTCCAACTCATACGTGTTTCTCGTTCTACTGTAGTGATCGTAGACGGGAAGGAGCAGACCTGGGCCAGTTTTTACCTCATTTTATACTAAAGGCCAGTCCTGTGTCATCACTGGGGGCAGCTTACATACACCTCTACTCTCATCCCTTAAACGAAGAGCAGTAGAGGGTCAAGTGAATGTCCGGTGTATTTACAGGAGGATTAGTTATGCAGCCCTCTTAAGCTGGACAGTCCAGGTGTTTGTTCATGAAGCTACCCCATCACGCAAGTTTAGAGTTAGTTGCCATGTCTTTTATTAACCGTCAGTGTAATAAAGGCTTTACAGCTCTGTTAGCATGTAAGTGAATTGAAACCAAAGCTGGCAATTAGCGATGGGAACATGTATATTGCCTTCTCAGATGTGCTGGTGGATATCTGGGGAAACTAAACCAGGAAATAGTGTAGCTGAAAGGGTTTATGAGGTGGTAAAAACATTGTTGTACCAATCCATACATCCCCAGTCCTGTtcacagtgtttatttaatcaGCCGTGCCAAAAGagtcctttttttaatatcaaaaacaGATTATATGCAAAAATCTGTAACTCTTAAAAGtggagagaaaaacaacaaaccccAGATTCCCAGTTTGTAAATGTCACATCGGATTGAAATAATCTGTTGGTGCTGAACTTCTGACCTGAGAGGACACCAATCTGATTATTtgaatgttgttattttattgatCATATTTTTACAAGTCTTCttttcttgtattttatatcatattgtgtaaataaattgaaatggtaataaaatgaAGACAATCTAGTGACATTCATGAAAAAAGAGAGTGGCAAATTGTTTCATGAGCATTTCTGATATTACTGATCAAAGTaagaataacaacaacaataataataatattatatagcaCAGAATTTGTCTCTGGCACTTTCACCAATCTTACACTAAAGATTAAGGTTCTGTTTGTCTCCTGTTttgaaattttctttttttttaattctgtatcTGCAATGTTATTTGAAGAGAAACtatcattaataaaatacacatttaataata

Function

symbol description
il1rapl1 Predicted to enable signaling receptor binding activity. Involved in negative regulation of exocytosis; regulation of synapse organization; and trans-synaptic signaling by trans-synaptic complex. Located in plasma membrane. Is active in glutamatergic synapse. Implicated in intellectual disability and non-syndromic X-linked intellectual disability 21.

NR:

description
PREDICTED: interleukin-1 receptor accessory protein-like 1-B isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249671.1 True 4864 mRNA 0.43 12 9838315 9884933

Neighbor

gene id symbol gene type direction distance location
prmt2 prmt2 coding upstream 179940 9653656 ~ 9658375 (+)
LOC122351877 ugt1a7,ugt1a5,ugt1a6,ugt1a2,LOC107663839,LOC107556441,LOC107732349,LOC107658228,LOC107658227,LOC107558044,LOC107720327 coding upstream 185690 9628614 ~ 9652625 (+)
LOC122351878 LOC107558046,LOC107658227,LOC107558044,LOC107720327 coding upstream 187406 9642697 ~ 9650909 (+)
LOC122351881 ugt1a2,LOC107663839,LOC107732349 coding upstream 197281 9639377 ~ 9641034 (+)
LOC122351879 LOC107558046,LOC107658227,LOC107558044,LOC107720327 coding upstream 198990 9637391 ~ 9639325 (+)
LOC122351260 hs6st3b,LOC107733651,LOC107555209,LOC107663930,LOC107600438,LOC107720131,LOC107655503 coding downstream 10148 9895081 ~ 9906181 (+)
LOC122351484 LOC107663876,LOC107707766,LOC107724486,LOC107569399 coding downstream 108944 9993877 ~ 10006512 (+)
LOC122351208 LOC107663876,LOC107707766,LOC107724486,LOC107569399 coding downstream 123009 10007942 ~ 10022230 (+)
LOC122351209 LOC107748218 coding downstream 137760 10022693 ~ 10030552 (+)
chaf1b chaf1b,LOC107748217,LOC107663888,LOC107655528,LOC107720114,LOC107572528 coding downstream 145868 10030801 ~ 10038362 (+)
G68908 NA non-coding upstream 262661 9575421 ~ 9575654 (+)
G68901 NA non-coding upstream 425580 9255332 ~ 9412735 (+)
G68900 NA non-coding upstream 596928 9240938 ~ 9241387 (+)
G68897 NA non-coding upstream 644012 9180904 ~ 9194303 (+)
G68896 NA non-coding upstream 653747 9180751 ~ 9184568 (+)
G69003 NA non-coding downstream 5718 9890651 ~ 9891580 (+)
G69028 NA non-coding downstream 170563 10055496 ~ 10056501 (+)
G69031 NA non-coding downstream 176125 10061058 ~ 10061611 (+)
G69032 NA non-coding downstream 176752 10061685 ~ 10061887 (+)
G69033 cx45.6,LOC107663873,LOC107748213,LOC107572527,LOC107655501,LOC107720145,LOC107600426 non-coding downstream 177275 10062208 ~ 10062436 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 271318 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 677494 9156045 ~ 9160821 (+)
si:ch1073-416j23.1 si:ch1073-416j23.1,LOC107749868,LOC107663920,LOC107556448 other upstream 688222 9142592 ~ 9150093 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other upstream 966682 8867097 ~ 8871633 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other upstream 972010 8863387 ~ 8866305 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other downstream 207417 10092350 ~ 10113356 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other downstream 282403 10167336 ~ 10174783 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other downstream 443798 10328731 ~ 10395230 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other downstream 1136803 11021736 ~ 11030409 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 1580671 11465604 ~ 11490149 (+)

Expression


Co-expression Network