dnajb11 (dnajb11,LOC107595843,LOC107690604,LOC107719809,LOC107659888,LOC107731764,LOC107569729)


Basic Information

Item Value
gene id dnajb11
gene name dnajb11,LOC107595843,LOC107690604,LOC107719809,LOC107659888,LOC107731764,LOC107569729
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 15894122 ~ 15899152 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249691.1
TTGTGTCAGAGCAGGAAGAGGCTTTTTGATAGACATCACAGAAAGCCGGTGTATTTTACTGGACTTCTGAAAGAAACAAGGACCCATGGCTGCTGGAGGAATGAAATTATCGAGTGTTTGTTTTCtacttttatatttgatattgaCGGTGCTGGCCGGGAGGGATTTCTACAAAATTCTGGGGGTTAGTAGATCAGCATCAATCAAAGACATAAAGAAAGCCTACAGAAAGCTGGCATTGCAGCTTCATCCAGACAGAAACCAAGATGACCCAAATGCCCAAGACAAATTTGCAGACCTCGGAGCTGCTTATGAGGTGCTCTCAGAtgaggagaaaagaaaacagtatGATGCATACGGAGAGGAGGGTTTAAAAGAAGGCCATCACAGTTCACACGGTGATATATTCTCCAGtttCTTTGGCGACTTTGGATTCATGTTCGGTGGAAATAGGCAGCCAGCCGGCCGAGATATTCCAAGGGGTAATGATATAGTACTGGATCTTGAAGTAACCTTAGAAGAGGTGTATTCAGGGAATTTTGTAGAGGTGGTGCGAAACAAACCTGTAGCAAAAGAAGCCCCCGGCAAAAGAAAATGCAACTGTCGACAGGAAATGAGAACCACACAGCTAGGACCGGGACGCTTCCAGATGACACAAGAAGTAGTCTGTGATGAATGCCCCAACATCAAGCTTGTGAATGAAGAGAGAACACTAGAGGTGGAGATTGAGCAGGGTGTGAGAGATGAGATGGAATACCCTTTCATCGGGGAAGGTGAACCTCACATTGACGGTGAGCCGGGAGATCTGCGTTTCCgcattaaagttttaaaGCACCCAGTGTTTGAACGCAGAGGCGATGACCTCTATACGAATGTCACCATCTCTCTGGTAGAGGCTCTGGTTGGTTTTGAGATGGACATCTCTCATTTAGATGGTCACAAGGTACACATCGTCAGAGATAAAATCACTAAACCAGGAGCTCGTATTTGGAAGAAGGGCGAGGGCTTACCAAATTTTGACAACAACAATATCCGTGGGTCGCTCATAGTCACCTTTGATGTAGATTTCCCCAAGGAGCAGCTCGATGACCAGCAAAAAGATGGTATAAGGCAACTTCTGAAACAGGCACCGTATCAGAAGGTTTATAACGGACTGCAGGGATACTGACAAACCAGCCAAGTAAATCAGGACTGATTGCCCTGTCCCTGTCtgcccttcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacttacatGCACACTGAGGAACAAGCAATGgggtgtatttatttttttctgattgttCTCAGGAAGGGttgacatttaatgtttttattttttcttcaatatacatttttaaaggtatttgttttctcatggaaagcattttttttaatttttattttgtccaaATGATTCGTTTTTTTCTTACATAGTTCCTGGTTTTCATCAGTTTGTGTTTGGACACTTACTTTCTACTATGACCAGTCACATACCATCCACTCATGGATCAGCATAATGTTTTGTCCCAGTTGACCTGAGACTGACTGTACCATAAACACAGAAAGAGGACTGAAACTTTAAATCGGAGGACAATTTAAACACCTGCCTCGGCTCTGTACATCTTCAAGACCTTTTTCTTTGGATCTTTTAAGAAGGAAACAGTTATATGAATGTAAGTTCATTGAGCTTTCTCAACCTAGACTCTTCGGTCTTTGGTCTGcttgttttaaagaacagaTTTATTACAGTTGTTGCAGTTAGTGTGGTTTTTGTATTCATCAAGCTgtgagcgtgagagagagagtgactgAGATTGCCGTGTTCAGATTTGCTGTCTAGTGACAGATCTTTGTCCTCTGAGGCATTTACTTGGGTTTTGAAGTTCAAACAGAAGACCTCTTAATGTGTACAGTTCATCTCTTTCCTGTGAATTTTTTATGTGACAGACTCGCTTTCTTGTTTCTTTCACAACCCCTCCTGATGTGCAGCCCACTTGGTCCCTTCCTAGTTAGTATGTTTCCTTTGCTCATTTGTGAACTGTACcagaaaagaaattaacaaCTTCTTAGGCTAACTTGTGCACAACTGACGGAAAtatcatttgtcattttcaaattaaaaataaaaagtttctaATTATGGTTAAAAATGGA

Function

symbol description
dnajb11 Predicted to enable unfolded protein binding activity. Predicted to act upstream of or within protein folding. Is expressed in several structures, including axial mesoderm; blood vessel; nervous system; neural tube; and pectoral fin. Human ortholog(s) of this gene implicated in polycystic kidney disease. Orthologous to human DNAJB11 (DnaJ heat shock protein family (Hsp40) member B11).

NR:

description
PREDICTED: dnaJ homolog subfamily B member 11

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K09517 DNAJB11; DnaJ homolog subfamily B member 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249691.1 True 2205 mRNA 0.42 10 15894122 15899152

Neighbor

gene id symbol gene type direction distance location
satb2 satb2,LOC107731767,LOC107690605,LOC107569722,LOC107595845,LOC107659884,LOC107719815 coding downstream 18025 15834539 ~ 15876097 (-)
rftn2 rftn2,LOC107690607,LOC107731757,LOC107719806,LOC107595849,LOC107569700 coding downstream 165322 15716322 ~ 15728800 (-)
hspd1 hspd1,LOC107569661,LOC107690611,LOC107659893,LOC107595848 coding downstream 186458 15701915 ~ 15707664 (-)
sf3b1 sf3b1,LOC107731751,LOC107569635,LOC107659892,LOC107719800,LOC107595847,LOC107690614 coding downstream 201507 15682700 ~ 15692615 (-)
ankrd44 ankrd44,LOC107719801,LOC107659898,LOC107595853 coding downstream 213283 15657514 ~ 15680839 (-)
LOC122351158 LOC107690624,LOC107595883 coding upstream 3195 15902347 ~ 15904183 (-)
LOC122351156 LOC107731741,LOC107569997 coding upstream 6876 15906028 ~ 15907567 (-)
ercc1 ercc1,LOC107570013 coding upstream 10132 15909284 ~ 15913570 (-)
olig1 olig1,LOC107731749,LOC107569756,LOC107683299,LOC107719828,LOC107659903,LOC107595892 coding upstream 31469 15930621 ~ 15932536 (-)
olig2 olig2,LOC107659900,LOC107719825,LOC107595891,LOC107731746,LOC107569749,LOC107690629 coding upstream 41738 15940890 ~ 15943090 (-)
G70660 NA non-coding downstream 131453 15762383 ~ 15762669 (-)
G70633 pikfyve,LOC107719798,LOC107681306,LOC107731754 non-coding downstream 249846 15642259 ~ 15644276 (-)
LOC122351574 NA non-coding downstream 255686 15628883 ~ 15638436 (-)
G70581 NA non-coding downstream 472545 15418999 ~ 15421577 (-)
LOC122351294 NA non-coding downstream 631446 15256988 ~ 15262676 (-)
LOC122352066 NA non-coding upstream 48961 15948113 ~ 15953976 (-)
G70894 NA non-coding upstream 219130 16118282 ~ 16120319 (-)
LOC122351188 NA non-coding upstream 706215 16605367 ~ 16631420 (-)
G70955 NA non-coding upstream 711118 16610270 ~ 16610561 (-)
G70956 NA non-coding upstream 713965 16613117 ~ 16613424 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other downstream 122258 15771421 ~ 15771864 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other downstream 494685 15389218 ~ 15399437 (-)
G70549 NA other downstream 588147 15303103 ~ 15305975 (-)
LOC122351495 NA other downstream 1521448 14359646 ~ 14372674 (-)
G70317 NA other downstream 1640346 14196479 ~ 14253776 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other upstream 821652 16720804 ~ 16746222 (-)
G70986 pou2f1b,LOC107748141 other upstream 917988 16817140 ~ 16823775 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other upstream 987601 16886753 ~ 16889547 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other upstream 1336720 17235872 ~ 17255491 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other upstream 1465035 17364187 ~ 17521560 (-)

Expression


Co-expression Network