asmtl (asmtl,LOC107597490,LOC107673687)


Basic Information

Item Value
gene id asmtl
gene name asmtl,LOC107597490,LOC107673687
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17137141 ~ 17143357 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249695.1
GGTAAAGTAGAAGTATCGTGACGTCGTTATATCAGGACAGGTTACTGCGCATGTGCGCGGCAGACTCCGCCTCTTCGGGATCTCTGCCTGTCAGTGAATGCACTGCGTTTCGGGAAGCGCAAGAGTTGAGCGGAGCAAGCCTTTCCAGGATAGACCTCTGGAAGTGACAGAAAGGAGAAGAGCAATATGCTGTTAAATCCAGTAATATCCAAGTTGAGTGGAAAGCTTGTTGTACTGGCAAGCGCATCGCCACGACGTCTGGAAATTTTATCTAATGCTGGTTTACGGTTCGAGGTGGTTCCTTCATGGTTTAAAGAAACACTGGACAAATCCTTGTTTAAGAGCCCATATGACTATGCAGTGGAGACAGCCAAACAGAAGGCTTTAGAAGTGGCCCACCGAATGCCATTTAAACACTTGAAAAGTCCAGATATCGTGATTGGAGCAGACACTGTTGTGACAGTTGACGGCTTGATCTTGGAGAAGCCTACAGATAAACAAGATGCTTACCGTATGCTATCAAgGTTGAGTGGCAAGGAACATAGCGTCTTCACAGGTGTAGCTATTGTGCTCTGCCATGATAAGAAAGGTTTAGATACAGACTACAAAGTGGTAGATTTTTATGAAGAGACAAAAGTTAAATTTGCTGAGTTATCTGAGGAGATGCTCTGGGAATACATCAACAGTGGAGAGCCCATGGACAAAGCTGGTGGTTACGGGATCCAGGCTTTGGGTGGCATGTTGGTGGAGTATGTAAAAGGAGATTTTCTTAATGTGGTAGGCTTTCCTCTTAACCACTTCTGCAAGCAGCTGGGATCGATTTTTAACAGCCCACCTGATAGTCCAGCCCATAAAGTCAAAAGGGAATCGGATGAGTCTTGGACTCTGGTTAACAGCCTGTCTGAGGGTGCTGCAAATGGGAAGGTTAAGCTAATGGAAAACGGTAAAGATGACGGTCGGACGTCAATGCAAGAACAGAATGTGATTGGGCCGGAGAGCAGCAGACAGGACGTCCCCCACAGTATCATCAGCTTACTGGATGGATTTAAAGCTTCAAAGGCTCTATTCACAGCATCCAAACTGAAGGTGTTTGATGTATTGAACGCCTCTAACAGTCTGACATTAGAAGAGGTAGCTGGCCAAATCAACGCCTCTGTTTTGGGCACCGAGAGGCTTTTGGAAGCTTCTGTCTCTTTAGGACTTCTAGAACGGGTCAAACGGCAAAATACCAGTGTGTATAGAAATACAGAACAGGCCAGTCGCTTCCTCGTATCAGACGGCCCAGAGTCATTGCATGGGTACATTCTCCACTGCAATGACATGGTGTGGCCTCTCTTCAGCCATCTAGAAAACGCTGTCAGGGAGGGCACCAGCCAACATGAGCGAGCATTTGGGAAGAAGAATGAGGATGTGTTTCAGGATGCATACTACAGTAAAGACGAAGTTAAGACACGATTCATGGATGCAATGCACAGCATCGCAAGGGTGACTGGAAAAGATGTAGCAACAGCGTTTGATCTTTCTCCTTATAAAACAGCTTGTGATATTGGAgGTTGCACTGGTGCCATGGCATACGAGTTTACAAAAGCACATCCTGGACTGTCGGTTATTGTATTTGACTTGCCACAAGTCATTGAGATGAGACGCCACTTTCAGCCTAAAGAAACTGATGACAGAGTGTCATTTGTTGCAGGAGATTTCTTTAAAGATGACCTGCCTAAAGCAGACCTGTATATTCTTGCACGAATCCTCCATGATTGGTCTGATGAGAAACTGCATATATTATTGAGTAAACTGTCCAAAAGGTGCACACCAGGTTGTGGGCTTCTGGTGTCTGAGATCTTGCTGGATGAGGAAAGAAAAAGGCCAAGCCGAGCCCTGTTGCAAGCCCTCAGTATGACAGAAGGAAAACAGAGGAGCACCACTGAATACAGTGACTTACTGGAGAAACATGGCTTCACTACCAAACACATCAAGCACTCGGACAATCTGCTGGATGCCATGCTATTTGTGAAAGAAGACCCAAATGACAAAAGAACATTACTTGGCTGTTCTTCAGCATCCATTGAGACCGCAGAACTTGAGTGATATGACGAAAGCATCTTGAAAACACTACAGCTGGCTTATTCTAGTTCAGTGTTTTAGCTGTGTTCGGATATTATGAATGTTTCTGACTAAGctcaaaataagtatttttacatgattattattattaattacacaaATTGTTTTTAACTGTGCATGTTgtatattgaattaaatatggTTTTGAATCAAAATGCA

Function

symbol description
asmtl Predicted to enable nucleoside-triphosphate diphosphatase activity. Predicted to act upstream of or within methylation. Orthologous to human ASMTL (acetylserotonin O-methyltransferase like).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0008171 O-methyltransferase activity molecular_function

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249695.1 True 2283 mRNA 0.44 14 17137141 17143357

Neighbor

gene id symbol gene type direction distance location
slc25a6 slc25a6,LOC107597494,LOC108426068,LOC107595824,LOC107695486,LOC107756767,LOC108266970 coding downstream 346 17132470 ~ 17136795 (-)
LOC122352140 NA coding downstream 5714 17117017 ~ 17131427 (-)
ppp2r3b ppp2r3b,LOC107673721,LOC108426065,LOC107748139,LOC107695472,LOC108266308 coding downstream 182792 16938284 ~ 16954349 (-)
grtp1b grtp1b,LOC107748194,LOC107695480,LOC107673704 coding downstream 234967 16898663 ~ 16902174 (-)
LOC122352097 me3,LOC107748144,LOC107595810,LOC107695468,LOC107756775,LOC108426042,LOC102313335 coding downstream 369956 16761873 ~ 16767185 (-)
p2ry8 p2ry8,LOC107748136,LOC107597492,LOC107673689,LOC107756734,LOC107695481,LOC107595819 coding upstream 1499 17144856 ~ 17151079 (-)
upf3a upf3a,LOC107673688,LOC107756766,LOC107597564,LOC107748176,LOC107695475 coding upstream 8541 17151898 ~ 17161537 (-)
cdc16 cdc16,LOC107673708,LOC107597489,LOC107748135,LOC107595809,LOC107756764,LOC107695467 coding upstream 18586 17161943 ~ 17170414 (-)
dcun1d2a dcun1d2a,LOC107597495,LOC107673709,LOC108426072,LOC103045446,LOC107756765 coding upstream 27192 17170549 ~ 17175714 (-)
mettl21cb zgc:172067,LOC107673723,LOC107748129,LOC107597488 coding upstream 45389 17188746 ~ 17192142 (-)
G71035 NA non-coding downstream 217827 16917224 ~ 16919314 (-)
G70981 nxpe3,LOC107597504,LOC107748146,LOC107673677,LOC107695470,LOC107756776,LOC107595812 non-coding downstream 269619 16866492 ~ 16867522 (-)
G71006 NA non-coding downstream 270719 16866178 ~ 16866422 (-)
G71005 NA non-coding downstream 271552 16865278 ~ 16865589 (-)
G70991 NA non-coding downstream 307482 16827058 ~ 16829659 (-)
G71117 NA non-coding upstream 69519 17212876 ~ 17297150 (-)
G71131 NA non-coding upstream 195763 17339120 ~ 17339530 (-)
G71134 NA non-coding upstream 197188 17340545 ~ 17340915 (-)
LOC122352115 NA non-coding upstream 200359 17343716 ~ 17351712 (-)
G71149 NA non-coding upstream 448607 17591964 ~ 17592183 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other downstream 247594 16886753 ~ 16889547 (-)
G70986 pou2f1b,LOC107748141 other downstream 313366 16817140 ~ 16823775 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other downstream 390919 16720804 ~ 16746222 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other downstream 1365277 15771421 ~ 15771864 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other downstream 1737704 15389218 ~ 15399437 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other upstream 92515 17235872 ~ 17255491 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other upstream 220830 17364187 ~ 17521560 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other upstream 1107879 18251236 ~ 18366267 (-)
LOC122352185 NA other upstream 1426398 18569755 ~ 18569882 (-)
ankar ankar,LOC107728908,LOC107660654 other upstream 2576585 19719942 ~ 19731794 (-)

Expression


Co-expression Network