Item | Value |
---|---|
gene id | tnfsf11 |
gene name | tnfsf11,LOC107549913,LOC107688674,LOC107713713,LOC107561312 |
gene type | coding |
species | tiger barb (Puntius tetrazona) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_056707.1 |
NCBI id | CM032076.1 |
chromosome length | 26426558 |
location | 3404812 ~ 3411893 (-) |
genome version | ASM1883169v1_2021_tiger_barb_Genome |
symbol | description |
---|---|
tnfsf11 | Predicted to enable tumor necrosis factor receptor binding activity. Acts upstream of or within response to mechanical stimulus. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in head and scale. Human ortholog(s) of this gene implicated in autosomal recessive osteopetrosis 2 and osteoporosis. Orthologous to human TNFSF11 (TNF superfamily member 11). |
description |
---|
tumor necrosis factor ligand superfamily member 11-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_043249723.1 | True | 2411 | mRNA | 0.42 | 4 | 3404812 | 3411893 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC122351418 | dnajc15 | coding | downstream | 41212 | 3146575 ~ 3363600 (-) |
LOC122351399 | enox1,LOC107549911,LOC107661308,LOC107561323,LOC107713727,LOC107688647 | coding | downstream | 83122 | 3287934 ~ 3321690 (-) |
lacc1 | lacc1,LOC107551973,LOC107748901,LOC107561313,LOC107688676,LOC107713702 | coding | downstream | 351575 | 3045802 ~ 3053237 (-) |
gtf2f2b | gtf2f2b,gtf2f2,LOC107661326,LOC107748886,LOC108267015,LOC103042992,LOC107691617 | coding | downstream | 430902 | 2957444 ~ 2973910 (-) |
chmp2ba | chmp2ba,chmp2b,LOC107661322,LOC107551976,LOC107688654,LOC107561317,LOC107713700 | coding | downstream | 485784 | 2909071 ~ 2919028 (-) |
akap11 | akap11,LOC107549933,LOC107713731 | coding | upstream | 7168 | 3419061 ~ 3436944 (-) |
rgcc | rgcc,LOC107664012,LOC107549932,LOC107713737 | coding | upstream | 189780 | 3601673 ~ 3606428 (-) |
zgc:101559 | zgc:101559,LOC107663997,LOC107749038,LOC107713736,LOC108435193,LOC108232329,LOC106527128 | coding | upstream | 195593 | 3607486 ~ 3610384 (-) |
kbtbd7 | kbtbd7,LOC107549928,LOC107713735,LOC107664000,LOC107549759,LOC107670891 | coding | upstream | 198563 | 3610456 ~ 3614044 (-) |
wu:fc50b12 | LOC107549762,LOC108232414 | coding | upstream | 202625 | 3614518 ~ 3616199 (-) |
G67384 | NA | non-coding | downstream | 16627 | 3387931 ~ 3388185 (-) |
G67383 | NA | non-coding | downstream | 19602 | 3384867 ~ 3385210 (-) |
LOC122351420 | NA | non-coding | downstream | 158915 | 3245369 ~ 3245897 (-) |
G67377 | si:ch73-63e15.2,LOC107669818,LOC107592676,LOC107719621,LOC107655177 | non-coding | downstream | 165227 | 3238663 ~ 3239585 (-) |
G67288 | tsc22d1,LOC107713726,LOC107551985 | non-coding | downstream | 388299 | 3015213 ~ 3016513 (-) |
G67475 | vwa8 | non-coding | upstream | 168949 | 3580842 ~ 3581209 (-) |
G67490 | mycbp2,LOC107749028 | non-coding | upstream | 230554 | 3642447 ~ 3671076 (-) |
G67491 | NA | non-coding | upstream | 260634 | 3672527 ~ 3742733 (-) |
G67537 | NA | non-coding | upstream | 417125 | 3829018 ~ 3829643 (-) |
G67581 | NA | non-coding | upstream | 533426 | 3945319 ~ 3946905 (-) |
G67358 | gpx4a | other | downstream | 210320 | 3189847 ~ 3194492 (-) |
serp2 | NA | other | downstream | 359505 | 3017043 ~ 3045307 (-) |
LOC122352064 | galnt13,galnt1,LOC107671291,LOC107566748,LOC106586166,LOC107657719,LOC107687813,LOC107723435,LOC107706221,LOC107593713 | other | downstream | 565858 | 2807924 ~ 2838954 (-) |
LOC122352168 | galnt13,LOC107657405,LOC107566748,LOC107671291,LOC107559530,LOC107745272 | other | downstream | 606218 | 2763420 ~ 2798594 (-) |
G67204 | NA | other | downstream | 775306 | 2627323 ~ 2629506 (-) |
dgkh | dgkh,LOC107713732,LOC107549907 | other | upstream | 25863 | 3437756 ~ 3507292 (-) |
G67668 | NA | other | upstream | 708570 | 4120463 ~ 4122103 (-) |
wipf1a | LOC107657348,LOC107600727 | other | upstream | 730397 | 4142290 ~ 4150239 (-) |
pde11a | pde11a,LOC107657382,LOC107671328 | other | upstream | 1203949 | 4615842 ~ 4666654 (-) |
LOC122351499 | LOC107670334,LOC107747232 | other | upstream | 1380531 | 4792424 ~ 4822965 (-) |