mettl5 (mettl5,LOC107744838,LOC107739664)


Basic Information

Item Value
gene id mettl5
gene name mettl5,LOC107744838,LOC107739664
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 24754888 ~ 24758657 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249729.1
GCGCTAGATCAGCCAGCAGAGGTAGAAGAAGAGCAAAACACACGCAAGTGCACTATATGTTGTCATATTTAATCCAGTGTACATTTTCCACTTGAGGAAAGTCGTTATATCACTAGAAGGCTCAAGTTCGGACTCCATGATCGTTCGGCGCTTCAGTTAAGAGAGAACCAGTCGACGTTTCTCGTCTATCATCATTAGCATGACCTCTAGAAACACATATGACTGATATGAGCAGAATTAATGTAGATTAGTGTAGATATGAAGCTCAAAGAGCTAGAAAGCTGCCTTCAACAGGTGGATGGATTTGAGGAGCCCAAAATACTCCTGGAGCAGTACCCCACCAGTCCGCATATAGCGGGCTGTATGCTGTACACCATCCACAACACATTTGATGACATACAGAATAAACTGGTAGCAGACTTGGGCTGTGGATGCGGGGTGCTATCGATAGGAGCCTCGGTGCTCGATGCTGGGCTGTGTGTCGGATTTGACATCGACGAAGACGCCTTGGACGTATTCAAAGGAAACGTCGAGGATTTTGAGCTGTCAAACGTTGATATGGTCCAGTGTGATGTTTGCTCTATTGGATCCTCTTACGCCAAGAAGTTTGACACGGTCATCATGAACCCGCCGTTTGGCACGAAGCACAACCAAGGGATTGACATGCAGTTCCTCCGAACGGCCATTTCCATGGCAAGTACAGCTGTGTATTCCCTTCACAAGACCTCAACGCGGGATCACATTCAGAAGAAAGCAAATGACTGGAAGGTGAAAATGGAAGTCATTGCAGAGCTCAGATATGACCTGCCAGCGTCTTATAAATTCCATAAAAAGAAGTCGGTTGATATTCAAGTGGACTTCATAAGATTTACTCCGACATGAACGTCAAAAAGGAATTTGTGATTACAAATGTGgttgcagtttttttatatatgtatatgtaaaaatacaatgttcaaaataaattttataaatgac

Function

symbol description
mettl5 Predicted to enable S-adenosyl-L-methionine binding activity and rRNA (adenine-N6-)-methyltransferase activity. Predicted to be involved in positive regulation of translation; rRNA methylation; and stem cell differentiation. Predicted to act upstream of or within methylation. Predicted to be located in nucleus; postsynapse; and presynapse. Used to study autosomal recessive intellectual developmental disorder-72. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder-72. Orthologous to human METTL5 (methyltransferase 5, N6-adenosine).

NR:

description
methyltransferase-like protein 5

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249729.1 True 978 mRNA 0.43 7 24754888 24758657

Neighbor

gene id symbol gene type direction distance location
ccdc173 ccdc173,LOC107596564,LOC107677915,LOC107564134,LOC107577048,LOC107744830 coding downstream 21106 24728368 ~ 24733782 (-)
fastkd1 NA coding downstream 27158 24717610 ~ 24727730 (-)
lrp2a lrp2a,lrp2 coding downstream 87721 24571862 ~ 24667167 (-)
abcb11a abcb11a,LOC107677906,LOC107674755,LOC107564151,LOC106581787,LOC107744834 coding downstream 196145 24533877 ~ 24558743 (-)
spc25 spc25,LOC107707602,LOC107564152,LOC107677909,LOC107708316,LOC107674771,LOC107566753 coding downstream 221840 24529672 ~ 24533048 (-)
cxcr2 LOC107656519,LOC107596606,LOC107739752,LOC107688962,LOC107564148,LOC107731305 coding upstream 2884 24761541 ~ 24764855 (-)
LOC122351585 LOC107656512,LOC107744835,LOC107596607,LOC107739743,LOC107688961,LOC107564147 coding upstream 9628 24768285 ~ 24772259 (-)
LOC122351587 NA coding upstream 26246 24784903 ~ 24786237 (-)
zgc:92380 zgc:92380,LOC107656510,LOC107564128,LOC107688951,LOC107739632 coding upstream 30849 24789506 ~ 24797054 (-)
gpbar1 LOC107656509,LOC107564146,LOC107688960,LOC107739693,LOC107596586 coding upstream 44966 24803623 ~ 24807781 (-)
G73160 NA non-coding downstream 8950 24739326 ~ 24745938 (-)
G73084 rdh1,LOC107566765,LOC107744825,LOC107674762,LOC106581784 non-coding downstream 183776 24564881 ~ 24571112 (-)
G73077 NA non-coding downstream 233580 24513094 ~ 24521308 (-)
G72980 NA non-coding downstream 469198 24253362 ~ 24285690 (-)
G72984 NA non-coding downstream 470723 24281991 ~ 24284165 (-)
G73175 NA non-coding upstream 17503 24776160 ~ 24778655 (-)
G73179 NA non-coding upstream 42381 24801038 ~ 24801377 (-)
LOC122351686 NA non-coding upstream 53659 24812316 ~ 24821062 (-)
G73186 NA non-coding upstream 80949 24839606 ~ 24839961 (-)
LOC122351187 NA non-coding upstream 333979 25092636 ~ 25094799 (-)
G72978 LOC107722896,LOC107674757,LOC107558607,LOC107677899,LOC107755197,LOC107600691 other downstream 474180 24220522 ~ 24280708 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other downstream 794563 23943985 ~ 23960325 (-)
G72930 LOC107656510,LOC107564128,LOC107744821,LOC107688951,LOC107596585 other downstream 823559 23930207 ~ 23931329 (-)
LOC122351746 pde1a,LOC107716994,LOC107699023,LOC107676083,LOC107601607,LOC106582264,LOC107755361,LOC108443795 other downstream 2243581 22297007 ~ 22511307 (-)
cerkl cerkl,LOC107699018,LOC107716999,LOC107755377,LOC107601393,LOC107676088 other downstream 2531221 22171463 ~ 22223667 (-)
G73201 NA other upstream 268928 25027585 ~ 25030965 (-)
G73301 NA other upstream 590121 25348778 ~ 25349640 (-)
G73300 LOC107577510,LOC107663597,LOC107729051,LOC107728259,LOC107661178 other upstream 697757 25456414 ~ 25458742 (-)
G73347 NA other upstream 1031860 25790517 ~ 25793056 (-)
LOC122351758 LOC107663860,LOC107722919,LOC107561565,LOC107585695,LOC107675138 other upstream 1035426 25794083 ~ 25853303 (-)

Expression


Co-expression Network